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JAL-4366 avoid corrupting map when no complete mapping available for chain to sequence
[jalview.git]
/
src
/
jalview
/
bin
/
argparser
/
BootstrapArgs.java
2023-12-05
Ben Soares
JAL-4353 Add secondary Types for Args, for STRUCTUREIMA...
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2023-11-13
James Procter
JAL-4090 JAL-1551 source license
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2023-10-11
Ben Soares
JAL-629 Remove argfiles from the hashset of used argfil...
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2023-09-07
Ben Soares
JAL-629 Change names of Opt.ALLOWALL to Opt.ALLOWMULTII...
improvement/JAL-629_Apply_alignment_options_to_all_globbed_files
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2023-08-17
Ben Soares
Merge branch 'feature/JAL-629_--output_-_means_output_t...
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2023-08-17
Ben Soares
JAL-3830 JAL-4160 Remove --noheadless as --gui does...
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2023-08-10
Ben Soares
JAL-629 STDOUT documentation. Opt.STDOUT narrower...
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2023-08-10
Ben Soares
JAL-629 Change all stdout and stderr output to use...
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2023-08-09
Ben Soares
JAL-629 Move more stdout messages to stderr when output...
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2023-06-01
Ben Soares
JAL-4193 JAL-4194 sessionProperties layer in Cache...
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2023-05-30
Ben Soares
JAL-4121 slight refactoring of method name and added...
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2023-05-27
Ben Soares
JAL-4121 Store Arg.Opts in bootstrapArgs. Change Opt...
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2023-05-18
Ben Soares
JAL-629 fixes to typed args
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2023-05-18
Ben Soares
JAL-629 Added 'Type' to args and argvalues
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2023-05-04
Ben Soares
JAL-629 More NG arguments: --features, --annotations...
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2023-04-12
Ben Soares
JAL-629 Fix non-multi string bootstrap arg bug.
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2023-04-12
Ben Soares
JAL-629 allow argfiles in argfiles, but avoid looping...
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2023-04-04
Ben Soares
JAL-629 Remove debugging comment
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2023-04-03
Ben Soares
JAL-629 sort files from java glob for predictability...
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2023-04-03
Ben Soares
JAL-629 added setprop. More filename based substitution...
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2023-03-29
Ben Soares
JAL-629 Added --opennew --nonews --nosplash. Added...
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2023-03-28
Ben Soares
JAL-629 Opening files in new windows. not working yet
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2023-03-23
Ben Soares
JAL-629 refactor ArgParser and helper classes all to...
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