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JAL-3210 renamed jar for consistency
[jalview.git]
/
src
/
jalview
/
bin
/
2019-07-16
gmungoc
JAL-3210 Merge branch 'develop' into trialMerge
tree
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commitdiff
2019-07-02
Jim Procter
Merge branch 'develop' into tasks/JAL-3311_removeVamsasMenu
tree
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commitdiff
2019-06-26
Jim Procter
JAL-3334 fix - always load full SO to resolve the seque...
tree
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commitdiff
2019-06-26
Jim Procter
JAL-3111 get rid of nasty tab characters
tree
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commitdiff
2019-06-19
Ben Soares
JAL-3321 Last pieces of the getdown-launcher.jar upgrad...
tree
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commitdiff
2019-06-17
Ben Soares
JAL-3310 JAL-3300 two getdown fixes merged
tree
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commitdiff
2019-06-17
Jim Procter
JAL-3311 remove menus and documentation relating to...
tasks/JAL-3311_removeVamsasMenu
tree
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commitdiff
2019-06-14
Ben Soares
JAL-3278 A system.out.println turned into a cache.log...
tree
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commitdiff
2019-06-14
Jim Procter
JAL-3111 report build type and commit in stdout from...
tree
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commitdiff
2019-06-14
Jim Procter
JAL-3299 JAL-3280 javadoc on BuildDetails bean
tree
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commitdiff
2019-05-22
Jim Procter
JAL-3274 import build properties and authors resources...
Jalview-JS/tasks/JAL-3274-build_details
tree
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commitdiff
2019-05-21
Ben Soares
JAL-3247 Launcher start improvements. RPM and DEB no...
tree
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commitdiff
2019-05-20
Ben Soares
JAL-3254 Improved memory setting (allows mem for OS...
tree
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commitdiff
2019-04-26
Ben Soares
JAL-3233 Added isAMac check for -Xdock:icon addition...
tree
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commitdiff
2019-04-25
Ben Soares
JAL-3224 JAL-3225 Some fixes in install4j template...
tree
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commitdiff
2019-04-25
Ben Soares
JAL-3224 JAL-3225 Added lines to check for updates...
tree
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commitdiff
2019-04-24
Jim Procter
Merge branch 'task/JAL-3225_Integration_Gradle_building...
tree
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commitdiff
2019-04-15
Ben Soares
JAL-3130 Helper classes to take Class Exceptions when...
tree
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commitdiff
2019-04-05
hansonr
fixes for Jalview command-line URI code
tree
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commitdiff
2019-04-03
hansonr
replacing @j2sNative with @j2sIgnore where appropriate...
tree
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commitdiff
2019-04-03
hansonr
j2sNative clean-up. Fixes problem with second try of...
tree
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commitdiff
2019-04-01
Ben Soares
JAL-3130 JAL-3007 Added gradle build for Java 11 and...
tree
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commitdiff
2019-03-31
hansonr
Cache JS adds search of Info for jalview_xxx properties
tree
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commitdiff
2019-03-27
gmungoc
JAL-3032 small formatting and isJS() tidy
tree
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commitdiff
2019-03-27
hansonr
reinstating test data for JalviewJS
tree
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commitdiff
2019-03-27
hansonr
comment out of @j2sNative block
tree
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commitdiff
2019-03-27
hansonr
consolidation of Platform isJS calls
tree
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commitdiff
2019-03-27
hansonr
isJS cleanup
tree
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commitdiff
2019-03-20
Ben Soares
JAL-3130 Lots of deprecation fixes. See utils/deprecat...
tree
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commitdiff
2019-03-13
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2019-03-11
gmungoc
Merge branch 'feature/JAL-3127_seqidChainshading' into...
tree
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commitdiff
2019-03-06
gmungoc
Merge branch 'tasks/JAL-3035_remove_dasobert_dependency...
tree
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commitdiff
2019-03-06
gmungoc
JAL-3035 more das bits removed
tree
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commitdiff
2019-03-06
Jim Procter
JAL-3208 re-enable the setprop CLI arg, but only in...
tree
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commitdiff
2019-03-04
gmungoc
Merge remote-tracking branch 'origin/tasks/JAL-3035_rem...
tree
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commitdiff
2019-02-28
gmungoc
JAL-3032 any url parameter not "j2s..." taken as Jalvie...
Jalview-BH/JAL-3026-JAL-3063-JAXB
tree
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commitdiff
2019-02-25
gmungoc
JAL-3032 Jalview (as JS) parse query params to main...
tree
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commitdiff
2019-02-25
gmungoc
JAL-3032 JalviewJS2 converts url query parameters to...
tree
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commitdiff
2019-01-26
hansonr
Jalview.isJS() --> Platform.isJS(), DBRefEntry[] -...
tree
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commitdiff
2019-01-21
hansonr
isAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA...
tree
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commitdiff
2019-01-18
hansonr
canvas line/font/pixel fixes; menu accelerators;
tree
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commitdiff
2019-01-11
hansonr
(commented out but potentially useful) methods to tap...
tree
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commitdiff
2018-12-01
hansonr
adding jaxbtest.jvx and directing JalviewJS2.java to...
tree
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commitdiff
2018-11-11
hansonr
adds static declaration of AJAX-readable domains
tree
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commitdiff
2018-10-19
Ben Soares
JAL-3141 Backup files being created with default suffix...
tree
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commitdiff
2018-10-17
Jim Procter
Merge branch 'feature/JAL-3063JAXB' into Jalview-BH...
tree
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commitdiff
2018-10-09
Jim Procter
JAL-3127 pass reference to AlignViewportI when creating...
tree
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commitdiff
2018-09-18
Jim Procter
JAL-3035 more dedasification
tree
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commitdiff
2018-09-11
Jim Procter
Merge branch 'develop' into releases/Release_2_11_Branch
tree
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commitdiff
2018-09-05
Jim Procter
JAL-3065 - amended commit 4906697ab6e5a79fbce3baae89f7...
bug/JAL-3065_DH_keyPair_Exception_nogroovysettings
tree
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commitdiff
2018-08-21
hansonr
mc_view references were MCview
tree
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commitdiff
2018-07-23
gmungoc
JAL-3056 suppress menu options, and repoint Help, for...
tree
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commitdiff
2018-07-23
gmungoc
JAL-3048 javadoc and code tidy
tree
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commitdiff
2018-07-20
hansonr
JAL-3032 moving Mungo's original JalviewJS.java out...
tree
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commitdiff
2018-07-17
bsoares
JAL-3065
tree
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commitdiff
2018-07-11
Jim Procter
JAL-3048 refactored export settings to bean+dialog...
Jalview-BH/JAL-3048_exportSettingsrefactor
tree
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commitdiff
2018-06-27
hansonr
JAL-3032 just the changes pulled already
tree
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commitdiff
2018-06-26
Jim Procter
Merge branch 'tasks/JAL-3035_remove_dasobert_dependency...
tree
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commitdiff
2018-06-26
Jim Procter
JAL-3035 - jalview-das is no more !
tree
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commitdiff
2018-06-24
hansonr
JAL-3032
tree
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commitdiff
2018-06-23
hansonr
RELATIVE_URL
tree
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commitdiff
2018-06-23
hansonr
Merge branch 'Jalview-BH/JAL-3026' of https://source...
tree
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commitdiff
2018-06-23
hansonr
JAL-3026 JDesktop/JInternalFrames support + relative...
tree
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commitdiff
2018-06-22
gmungoc
Merge branch 'Jalview-BH/JAL-3026' of https://source...
tree
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commitdiff
2018-06-22
gmungoc
JAL-3030 size split frame taller
tree
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commitdiff
2018-06-22
hansonr
fix for no access-control-origin on jalview site
tree
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commitdiff
2018-06-21
gmungoc
JAL-3030 allow uncaught exceptions (for easier JS debuggin)
tree
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commitdiff
2018-06-21
gmungoc
JAL-3030 try to open a split frame if file and file2...
tree
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commitdiff
2018-06-20
hansonr
update of javajs package; adds org.apache.harmony,...
tree
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commitdiff
2018-06-20
hansonr
Bob first commit JAL-3032
tree
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commitdiff
2018-06-20
gmungoc
JAL-3030 suppress change that goes with JAL-3031
tree
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commitdiff
2018-06-20
gmungoc
JAL-3030 reads features file, properties file
tree
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commitdiff
2018-06-19
gmungoc
JAL-3030 added menu bar
tree
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commitdiff
2018-06-19
gmungoc
JAL-3030 first cut of JalviewJS.main entry point accept...
tree
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commitdiff
2018-05-09
Jim Procter
JAL-2976 fixed bad equivalence check and implemented...
tree
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commitdiff
2018-05-02
Jim Procter
JAL-2976 fallback to Vaqua for Macs that don’t work...
tree
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commitdiff
2018-03-13
gmungoc
JAL-2913 use FIGURE_FIXEDIDWIDTH (not FIGURE_USERIDWIDTH)
tree
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commitdiff
2018-03-07
gmungoc
JAL-2913 use FIGURE_USERIDWIDTH for fixed id width...
tree
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commitdiff
2018-02-27
Jim Procter
Merge branch 'feature/JAL-2759' into merge/JAL-2759_2104
tree
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commitdiff
2018-01-16
gmungoc
JAL-1270 JAL-2885 clear properties before load
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Refactor of hideInsertionsFor after review
tree
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commitdiff
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
tree
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
tree
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commitdiff
2017-06-09
gmungoc
JAL-2446 merged to spike branch
tree
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commitdiff
2017-05-05
kiramt
Merge remote-tracking branch 'origin/develop' into
features/JAL-2388hiddencolumnschanges
tree
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commitdiff
2017-04-24
kiramt
JAL-2388 Hidden cols separated from column selection...
tree
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commitdiff
2017-03-24
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
tree
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commitdiff
2017-03-24
Jim Procter
JAL-2360 fix applet build by separating castor XML...
tree
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commitdiff
2017-02-27
gmungoc
JAL-1632 similarity options on TreeChooser panel affect...
tree
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commitdiff
2017-02-08
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-02-08
Jim Procter
JAL-2366 updated default URL to jalview.org/services...
tree
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commitdiff
2017-01-26
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-01-26
kiramt
JAL-2316 Updated to use identifiers jalview service
tree
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commitdiff
2017-01-17
gmungoc
Merge branch 'develop' into features/JAL-2360colourSche...
tree
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commitdiff
2017-01-11
gmungoc
JAL-2344 FileFormats singleton for formats, FileFormatI...
tree
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commitdiff
2017-01-09
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-01-05
gmungoc
Merge branch 'develop' into features/JAL-2360colourSche...
tree
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commitdiff
2016-12-23
gmungoc
JAL-2360 removed UserDefinedColours.userColourSchemes
tree
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commitdiff
2016-12-16
gmungoc
JAL-2360 added UserColourScheme.toAppletParameter+test...
tree
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commitdiff
2016-12-16
gmungoc
JAL-2360 getColour() renamed to getColourScheme(),...
tree
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commitdiff
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