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JAL-3223 - update swingjs to 3.2.9-j11
[jalview.git] / src / jalview / bin /
2020-06-30 gmungocJAL-3446 unused imports removed tree | commitdiff
2020-06-18 BobHansonJAL-3659 unnecessary duplication -- test is made in... tree | commitdiff
2020-06-18 BobHansonJAL-3446 unintentially left training message in code. tree | commitdiff
2020-06-17 Jim ProcterJAL-3662 JAL-3660 JAL-3561 source formatting tree | commitdiff
2020-06-17 Jim ProcterJAL-3660 JAL-3561 output alignment as requested file... cherrypicks/JAL-3660_JAL-3561_JAL-3662_cli_outputformat tree | commitdiff
2020-06-16 BobHansonJAL-3659 proper headless check; skips setProperty for JS tree | commitdiff
2020-06-16 BobHansonJAL-3662 simple fix for CLI not using right format... tree | commitdiff
2020-06-11 BobHansonMerge branch 'Jalview-JS/develop.JAL-3446.ctrlDown... tree | commitdiff
2020-06-09 BobHansonJAL-3446 from applet; JAL-3374 tree | commitdiff
2020-06-09 BobHansonJAL-3446 from applet - Cache news date fix tree | commitdiff
2020-06-07 BobHansonJAL-3446 AppletParams tree | commitdiff
2020-06-07 BobHansonJAL-3446 reorganized JalviewJSApp (accidentally put... tree | commitdiff
2020-06-07 BobHansonreorganized JalviewJSApp (accidentally put that in... tree | commitdiff
2020-06-07 BobHansonJAL-3446 JavaScript interface tree | commitdiff
2020-06-06 BobHansonJAL-3446 adds Jmol viewer embedding. tree | commitdiff
2020-06-06 BobHansonJAL-3379 JalviewJS-API specs - preliminary tree | commitdiff
2020-06-05 BobHansonJAL-3446 removes all JalviewJSApp dependency from jalvi... tree | commitdiff
2020-06-05 BobHansonRefactoring of Jalview, JalviewAppLoader, JalviewApp... tree | commitdiff
2020-06-03 BobHansonJAL-3664 support for user.home, user.dir, user tree | commitdiff
2020-06-03 BobHansonJAL-3446 from JAL-3253 ApplicationSingletonProvider tree | commitdiff
2020-06-03 BobHansonJAL-3446 from JAL-3253 ApplicationSingletonProvider... tree | commitdiff
2020-06-02 BobHansonJAL-3446 from JAL-3253 ApplicationSingletonProvider... tree | commitdiff
2020-06-02 BobHansonJAL-3446 from JAL-3253-applet Desktop and Jws2Discovere... tree | commitdiff
2020-06-02 BobHansonJAL-3446 test for simpler key mask operation tree | commitdiff
2020-06-02 BobHansonJAL-3626 from JAL-3253-applet Jalview.java tree | commitdiff
2020-06-02 BobHansonJAL-3626 from JAL-3253-applet Cache applicationProperti... tree | commitdiff
2020-06-02 BobHansonJAL-3626 from JAL-3253-applet web page embedding tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet AppletParams + Cache... tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet ArgsParser tree | commitdiff
2020-06-01 BobHansonJAL-3262 from JAL-3523-applet JalviewApp and JalviewJSApi tree | commitdiff
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop tree | commitdiff
2020-04-21 Jim ProcterJAL-3407 add GPL license to Jalview source files tree | commitdiff
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-02-27 Ben SoaresJAL-3543 remove debugging output improvement/JAL-3543_dont_report_null_versions_in_java_console tree | commitdiff
2020-02-27 Ben SoaresMerge branch 'develop' into improvement/JAL-3543_dont_r... tree | commitdiff
2020-02-27 Ben SoaresJAL-3543 Conditional reporting of Install4j and Getdown... tree | commitdiff
2020-02-26 Jim ProcterMerge branch 'bug/JAL-3477_memory_max_allocation' into... tree | commitdiff
2020-01-10 Ben SoaresJAL-3477 Javadoc, addition of -jvmmempc and -jvmmemmax... tree | commitdiff
2020-01-09 Ben SoaresJAL-3477 Refactoring based on CR-JAL-189 tree | commitdiff
2020-01-09 Ben SoaresJAL-3477 Javadoc, refactoring and slight changes to... tree | commitdiff
2019-12-06 Ben SoaresJAL-3449 Added more versions to getdown splashscreen... tree | commitdiff
2019-11-22 Ben SoaresJAL-3449 install4j version, install4j template version... tree | commitdiff
2019-11-20 Ben SoaresJAL-3477 A bit of refactoring for the better tree | commitdiff
2019-11-19 Ben SoaresJAL-3210 removing overly complicated logging. Settling... tree | commitdiff
2019-11-18 Ben SoaresJAL-3477 New jvmmemmax config option in getdown and... tree | commitdiff
2019-11-18 Ben SoaresJAL-3477 New sensible default decisions on memory,... tree | commitdiff
2019-11-12 gmungocJAL-3274 resource path correction, code tidying (consta... tree | commitdiff
2019-11-05 gmungocJAL-3210 JAL-3130 skip Taskbar in JalviewJS tree | commitdiff
2019-11-05 gmungocJAL-3210 JAL-3330 use SequenceOntologyLite in JalviewJS tree | commitdiff
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge tree | commitdiff
2019-07-02 Jim ProcterMerge branch 'develop' into tasks/JAL-3311_removeVamsasMenu tree | commitdiff
2019-06-26 Jim ProcterJAL-3334 fix - always load full SO to resolve the seque... tree | commitdiff
2019-06-26 Jim ProcterJAL-3111 get rid of nasty tab characters tree | commitdiff
2019-06-19 Ben SoaresJAL-3321 Last pieces of the getdown-launcher.jar upgrad... tree | commitdiff
2019-06-17 Ben SoaresJAL-3310 JAL-3300 two getdown fixes merged tree | commitdiff
2019-06-17 Jim ProcterJAL-3311 remove menus and documentation relating to... tasks/JAL-3311_removeVamsasMenu tree | commitdiff
2019-06-14 Ben SoaresJAL-3278 A system.out.println turned into a cache.log... tree | commitdiff
2019-06-14 Jim ProcterJAL-3111 report build type and commit in stdout from... tree | commitdiff
2019-06-14 Jim ProcterJAL-3299 JAL-3280 javadoc on BuildDetails bean tree | commitdiff
2019-05-22 Jim ProcterJAL-3274 import build properties and authors resources... Jalview-JS/tasks/JAL-3274-build_details tree | commitdiff
2019-05-21 Ben SoaresJAL-3247 Launcher start improvements. RPM and DEB no... tree | commitdiff
2019-05-20 Ben SoaresJAL-3254 Improved memory setting (allows mem for OS... tree | commitdiff
2019-04-26 Ben SoaresJAL-3233 Added isAMac check for -Xdock:icon addition... tree | commitdiff
2019-04-25 Ben SoaresJAL-3224 JAL-3225 Some fixes in install4j template... tree | commitdiff
2019-04-25 Ben SoaresJAL-3224 JAL-3225 Added lines to check for updates... tree | commitdiff
2019-04-24 Jim ProcterMerge branch 'task/JAL-3225_Integration_Gradle_building... tree | commitdiff
2019-04-15 Ben SoaresJAL-3130 Helper classes to take Class Exceptions when... tree | commitdiff
2019-04-05 hansonrfixes for Jalview command-line URI code tree | commitdiff
2019-04-03 hansonrreplacing @j2sNative with @j2sIgnore where appropriate... tree | commitdiff
2019-04-03 hansonrj2sNative clean-up. Fixes problem with second try of... tree | commitdiff
2019-04-01 Ben SoaresJAL-3130 JAL-3007 Added gradle build for Java 11 and... tree | commitdiff
2019-03-31 hansonrCache JS adds search of Info for jalview_xxx properties tree | commitdiff
2019-03-27 gmungocJAL-3032 small formatting and isJS() tidy tree | commitdiff
2019-03-27 hansonrreinstating test data for JalviewJS tree | commitdiff
2019-03-27 hansonrcomment out of @j2sNative block tree | commitdiff
2019-03-27 hansonrconsolidation of Platform isJS calls tree | commitdiff
2019-03-27 hansonrisJS cleanup tree | commitdiff
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat... tree | commitdiff
2019-03-13 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2019-03-11 gmungocMerge branch 'feature/JAL-3127_seqidChainshading' into... tree | commitdiff
2019-03-06 gmungocMerge branch 'tasks/JAL-3035_remove_dasobert_dependency... tree | commitdiff
2019-03-06 gmungocJAL-3035 more das bits removed tree | commitdiff
2019-03-06 Jim ProcterJAL-3208 re-enable the setprop CLI arg, but only in... tree | commitdiff
2019-03-04 gmungocMerge remote-tracking branch 'origin/tasks/JAL-3035_rem... tree | commitdiff
2019-02-28 gmungocJAL-3032 any url parameter not "j2s..." taken as Jalvie... Jalview-BH/JAL-3026-JAL-3063-JAXB tree | commitdiff
2019-02-25 gmungocJAL-3032 Jalview (as JS) parse query params to main... tree | commitdiff
2019-02-25 gmungocJAL-3032 JalviewJS2 converts url query parameters to... tree | commitdiff
2019-01-26 hansonrJalview.isJS() --> Platform.isJS(), DBRefEntry[] -... tree | commitdiff
2019-01-21 hansonrisAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA... tree | commitdiff
2019-01-18 hansonrcanvas line/font/pixel fixes; menu accelerators; tree | commitdiff
2019-01-11 hansonr(commented out but potentially useful) methods to tap... tree | commitdiff
2018-12-01 hansonradding jaxbtest.jvx and directing JalviewJS2.java to... tree | commitdiff
2018-11-11 hansonradds static declaration of AJAX-readable domains tree | commitdiff
2018-10-19 Ben SoaresJAL-3141 Backup files being created with default suffix... tree | commitdiff
2018-10-17 Jim ProcterMerge branch 'feature/JAL-3063JAXB' into Jalview-BH... tree | commitdiff
2018-10-09 Jim ProcterJAL-3127 pass reference to AlignViewportI when creating... tree | commitdiff
2018-09-18 Jim ProcterJAL-3035 more dedasification tree | commitdiff
2018-09-11 Jim ProcterMerge branch 'develop' into releases/Release_2_11_Branch tree | commitdiff
2018-09-05 Jim ProcterJAL-3065 - amended commit 4906697ab6e5a79fbce3baae89f7... bug/JAL-3065_DH_keyPair_Exception_nogroovysettings tree | commitdiff
2018-08-21 hansonrmc_view references were MCview tree | commitdiff
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