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[jalview.git] / src / jalview / datamodel / AlignmentAnnotation.java

2007-05-28	jprocter	fix compact annotation array routine	blob \| commitdiff
2007-05-02	jprocter	checks for negative start column in restrict	blob \| commitdiff \| diff to current
2007-05-02	amwaterhouse	Padgaps is false by default	blob \| commitdiff \| diff to current
2007-05-01	amwaterhouse	Pad gaps method	blob \| commitdiff \| diff to current
2007-04-30	jprocter	pad should leave null annotations array null	blob \| commitdiff \| diff to current
2007-04-30	jprocter	convenient creation of 'score only' annotation.	blob \| commitdiff \| diff to current
2007-04-27	amwaterhouse	padGaps moved	blob \| commitdiff \| diff to current
2007-04-26	jprocter	score is a double, fix bugs for score only annotation...	blob \| commitdiff \| diff to current
2007-04-26	jprocter	score and visible copy construction	blob \| commitdiff \| diff to current
2007-04-26	jprocter	fix for null annotations	blob \| commitdiff \| diff to current
2007-04-25	amwaterhouse	alignmentProperties added	blob \| commitdiff \| diff to current
2007-04-25	jprocter	AlignmentAnnotation: added annotation score attribute...	blob \| commitdiff \| diff to current
2007-04-23	amwaterhouse	Check for null displayCharacters	blob \| commitdiff \| diff to current
2007-04-20	jprocter	fix null annotation values	blob \| commitdiff \| diff to current
2007-04-19	jprocter	bugfix	blob \| commitdiff \| diff to current
2007-04-19	jprocter	padGaps flag in copy constructor	blob \| commitdiff \| diff to current
2007-04-19	jprocter	copying sequenceMapping, restrict(alstart/end) and...	blob \| commitdiff \| diff to current
2007-04-18	amwaterhouse	Validate range for all annotations	blob \| commitdiff \| diff to current
2007-04-18	amwaterhouse	Pad gaps when annotation editing	blob \| commitdiff \| diff to current
2007-04-18	amwaterhouse	Check values not null in copy constructor	blob \| commitdiff \| diff to current
2007-04-18	jprocter	java 1.1 compliance	blob \| commitdiff \| diff to current
2007-04-17	jprocter	copy constructors and AlignmentAnnotation sequenceRef...	blob \| commitdiff \| diff to current
2007-02-07	amwaterhouse	Formatting	blob \| commitdiff \| diff to current
2007-01-30	amwaterhouse	Check valid residues in ss	blob \| commitdiff \| diff to current
2007-01-26	amwaterhouse	AnnotationId is hashcode of object	blob \| commitdiff \| diff to current
2007-01-25	amwaterhouse	Annotation adjustment moved to EditCommand	blob \| commitdiff \| diff to current
2007-01-24	amwaterhouse	AdjustAnnotations needs position, number and insert	blob \| commitdiff \| diff to current
2007-01-18	amwaterhouse	Is secondary structure label modified	blob \| commitdiff \| diff to current
2006-12-14	amwaterhouse	Watch out for - symbol lin jnet files	blob \| commitdiff \| diff to current
2006-12-14	amwaterhouse	Are the labels all secondary Strutures? are the display...	blob \| commitdiff \| diff to current
2006-10-06	jprocter	javadoc	blob \| commitdiff \| diff to current
2006-08-29	amwaterhouse	SequenceMapping updated	blob \| commitdiff \| diff to current
2006-08-21	amwaterhouse	header updated	blob \| commitdiff \| diff to current
2006-08-21	jprocter	fix for truncation of sequence associated annotation...	blob \| commitdiff \| diff to current
2006-08-20	jprocter	javadoc	blob \| commitdiff \| diff to current
2006-07-07	amwaterhouse	Checks on drawing characters and if sequence ref has...	blob \| commitdiff \| diff to current
2006-05-15	amwaterhouse	All or nothing drawing display char	blob \| commitdiff \| diff to current
2006-05-10	amwaterhouse	Correction for sequences with start not equal to 1	blob \| commitdiff \| diff to current
2006-05-10	amwaterhouse	Create sequence mapping for annotations	blob \| commitdiff \| diff to current
2006-02-24	amwaterhouse	Typo	blob \| commitdiff \| diff to current
2006-02-15	amwaterhouse	Removed SuperGroup	blob \| commitdiff \| diff to current
2006-02-03	amwaterhouse	Add annotation with sequence ref updated	blob \| commitdiff \| diff to current
2006-01-30	amwaterhouse	AddAnnotation with start index	blob \| commitdiff \| diff to current
2005-12-22	amwaterhouse	graph now has type, not a boolean	blob \| commitdiff \| diff to current
2005-06-30	amwaterhouse	Formatting changes	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	Formatted source	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	GPL license added	blob \| commitdiff \| diff to current
2005-05-26	amwaterhouse	toString modified	blob \| commitdiff \| diff to current
2005-05-25	amwaterhouse	toString method added	blob \| commitdiff \| diff to current
2005-05-19	amwaterhouse	calculate max and min for graph	blob \| commitdiff \| diff to current
2005-04-01	amwaterhouse	Alignment Annotation added	blob \| commitdiff \| diff to current

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