2017-09-20 |
kiramt | JAL-2674 fix up interface of locateVisibleBoundsOfSequence |
tree | commitdiff |
2017-09-05 |
Jim Procter | Merge branch 'master' into portforward/JAL-2675_2102b1t... |
tree | commitdiff |
2017-09-04 |
Jim Procter | JAL-2675 source license |
tree | commitdiff |
2017-09-03 |
Jim Procter | Merge branch 'bug/JAL-2665-2.10.2b' into documentation... bug/JAL-2673_mergewithproblem |
tree | commitdiff |
2017-09-03 |
Jim Procter | Merge branch 'documentation/JAL-2675_release2102b1... |
tree | commitdiff |
2017-09-03 |
Jim Procter | Merge branch 'feature/JAL-2527' into documentation... |
tree | commitdiff |
2017-09-01 |
gmungoc | JAL-2488 remove finalize methods |
tree | commitdiff |
2017-08-30 |
kiramt | Merge branch 'feature/JAL-2664' into feature/JAL-2527 |
tree | commitdiff |
2017-08-29 |
kiramt | JAL-2664 Updates following review feature/JAL-2664 |
tree | commitdiff |
2017-08-28 |
kiramt | Merge remote-tracking branch 'origin/develop' into... |
tree | commitdiff |
2017-08-28 |
kiramt | Merge remote-tracking branch 'origin/releases/Release_2... |
tree | commitdiff |
2017-08-28 |
kiramt | JAL-2665 Changes for review comments; printing with... bug/JAL-2665 |
tree | commitdiff |
2017-08-23 |
gmungoc | JAL-2682 non-regex sequence id parsing, and tests added |
tree | commitdiff |
2017-08-22 |
Jim Procter | JAL-1551 formatting |
tree | commitdiff |
2017-08-21 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList |
tree | commitdiff |
2017-08-16 |
Jim Procter | JAL-2418 source formatting |
tree | commitdiff |
2017-08-16 |
kiramt | JAL-2665 Added hidden columns group selection - almost... |
tree | commitdiff |
2017-08-16 |
kiramt | JAL-2665 Added sequence group update event. |
tree | commitdiff |
2017-08-09 |
gmungoc | JAL-2480 inline one method, improve comments |
tree | commitdiff |
2017-08-01 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-07-24 |
gmungoc | spike branch updated from latest features/JAL-2446 |
tree | commitdiff |
2017-07-22 |
kiramt | Merge branch 'develop' into feature/JAL-2611 |
tree | commitdiff |
2017-07-19 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-07-13 |
kiramt | JAL-2613 Unit tests and a fix. Phew. |
tree | commitdiff |
2017-07-05 |
gmungoc | JAL-147 additions to unit test, check for negative... |
tree | commitdiff |
2017-07-05 |
gmungoc | JAL-147 prevent overview box move up over hidden first... |
tree | commitdiff |
2017-06-30 |
gmungoc | JAL-2505 correct handling of change of feature type |
tree | commitdiff |
2017-06-30 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-06-29 |
kiramt | JAL-2597 Fix and unit test bug/JAL-2597 |
tree | commitdiff |
2017-06-27 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-06-24 |
gmungoc | Merge branch 'features/JAL-2446NCList' into spikes... |
tree | commitdiff |
2017-06-24 |
gmungoc | JAL-2547 fix case of gap followed by enclosing contact... |
tree | commitdiff |
2017-06-24 |
gmungoc | Merge branch 'features/JAL-2446NCList' into spikes... |
tree | commitdiff |
2017-06-23 |
gmungoc | JAL-1858 handle hidden columns when computing region... |
tree | commitdiff |
2017-06-22 |
gmungoc | JAL-2481 JAL-2593 JAL-2526 further optimisation of... |
tree | commitdiff |
2017-06-22 |
gmungoc | JAL-2480 simpler and safer test to avoid adding duplicates |
tree | commitdiff |
2017-06-21 |
gmungoc | JAL-2480 tidy generic initialisations, SequenceFeatures... |
tree | commitdiff |
2017-06-20 |
gmungoc | JAL-2526 don't retain lastColumnPosition from an invali... |
tree | commitdiff |
2017-06-15 |
gmungoc | Merge branch 'bug/JAL-2386groupConservationColouring... |
tree | commitdiff |
2017-06-14 |
gmungoc | JAL-2598 Sequence.getSequence return a copy of the... |
tree | commitdiff |
2017-06-12 |
kiramt | JAL-2591 Updates following code review |
tree | commitdiff |
2017-06-09 |
gmungoc | JAL-2446 merged to spike branch |
tree | commitdiff |
2017-06-09 |
gmungoc | JAL-2480 tidy javadoc |
tree | commitdiff |
2017-06-08 |
gmungoc | JAL-2526 correct boundary conditions for sequence left... |
tree | commitdiff |
2017-06-08 |
gmungoc | JAL-2386 JAL-2570 use ResidueShader copy constructor... bug/JAL-2386groupConservationColouring |
tree | commitdiff |
2017-06-08 |
kiramt | JAL-2591 Refactor HiddenColumns to use ArrayList instea... |
tree | commitdiff |
2017-06-08 |
kiramt | JAL-2591 More HiddenColumns refactoring. Tests passing. |
tree | commitdiff |
2017-06-08 |
gmungoc | JAL-2526 cache first/last residue column positions... |
tree | commitdiff |
2017-06-08 |
gmungoc | JAL-2526 reuse findIndex result if start==end |
tree | commitdiff |
2017-06-07 |
kiramt | JAL-2591 Further refactoring (still incomplete) |
tree | commitdiff |
2017-06-07 |
kiramt | JAL-2591 More refactoring (incomplete) |
tree | commitdiff |
2017-06-07 |
kiramt | JAL-2591 Hidden columns regions can be output to string... |
tree | commitdiff |
2017-06-07 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-06-07 |
kiramt | JAL-2591 updated HiddenColumns::findHiddenRegionPositio... |
tree | commitdiff |
2017-06-07 |
gmungoc | JAL-2386 ensure group conservation shading is applied... |
tree | commitdiff |
2017-06-07 |
kiramt | JAL-2591 simplifying hidden columns usage |
tree | commitdiff |
2017-06-06 |
kiramt | JAL-2591 Added readwrite locking on HiddenColumns |
tree | commitdiff |
2017-06-06 |
gmungoc | JAL-2526 less stringent test for invalid cursor |
tree | commitdiff |
2017-06-06 |
kiramt | Merge remote-tracking branch 'origin/bug/JAL-2576'... |
tree | commitdiff |
2017-06-05 |
Jim Procter | Merge branch 'bug/JAL-2576' into develop |
tree | commitdiff |
2017-06-05 |
gmungoc | JAL-2505 comments updated |
tree | commitdiff |
2017-06-05 |
gmungoc | JAL-2480 remove redundant method, further test coverage |
tree | commitdiff |
2017-06-05 |
gmungoc | JAL-2505 explicit (and final) contactFeature property |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'features/JAL-2526sequenceCursor' into |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'features/JAL-2446NCList' into |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features/JAL-2526sequenceCursor |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 get bitset representing hidden columns |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 method taking a BitSet for hiding columns |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 bug fix - BitSet.set is [start,end+1) |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 SequenceI.getInsertionsAsBits for convenient... |
tree | commitdiff |
2017-06-02 |
gmungoc | JAL-2526 additional tests for findPosition with/without... |
tree | commitdiff |
2017-06-02 |
kiramt | JAL-2576 Proposed fix bug/JAL-2576 |
tree | commitdiff |
2017-06-02 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-06-01 |
gmungoc | JAL-2526 additional calls to sequenceChanged() after... |
tree | commitdiff |
2017-06-01 |
gmungoc | JAL-2526 zapCursor() renamed sequenceChanged() |
tree | commitdiff |
2017-06-01 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-06-01 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-06-01 |
gmungoc | JAL-2754 Sequence.findFeatures(fromCol, toCol) features/JAL-2754findFeaturesByColumn |
tree | commitdiff |
2017-05-31 |
Jim Procter | Merge branch 'JAL-2571' into develop |
tree | commitdiff |
2017-05-30 |
kiramt | JAL-2571 Corrected alignment width/height checks to... |
tree | commitdiff |
2017-05-30 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-05-30 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-30 |
gmungoc | JAL-2570 don't zap group colour scheme when mapping... |
tree | commitdiff |
2017-05-30 |
gmungoc | JAL-2526 first draft of findIndex/findPosition with... |
tree | commitdiff |
2017-05-29 |
Jim Procter | Merge branch 'bug/JAL-2034contextchange' into develop |
tree | commitdiff |
2017-05-29 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-29 |
gmungoc | JAL-2526 Sequence.findPositions to get residue position... |
tree | commitdiff |
2017-05-27 |
Jim Procter | JAL-2562 javadoc TODO |
tree | commitdiff |
2017-05-26 |
gmungoc | JAL-2480 move ContiguousI and Range to jalview.datamodel |
tree | commitdiff |
2017-05-25 |
gmungoc | JAL-2557 removal of Sequence.sequenceFeatures |
tree | commitdiff |
2017-05-25 |
gmungoc | JAL-2050 make SequenceFeature.score final, adjust const... |
tree | commitdiff |
2017-05-25 |
gmungoc | JAL-2505 simplifying number of SequenceFeature construc... |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2505 make SequenceFeature type, begin, end, feature... |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2506 relocate Uniprot binding classes, bind to... |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2505 remove setters for SequenceFeature.begin,end... |
tree | commitdiff |
2017-05-24 |
gmungoc | Merge branch 'bug/JAL-2541cutWithFeatures' into feature... |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2505 JAL-2542 SequenceFeatures.shift() to shift... |
tree | commitdiff |
2017-05-24 |
kiramt | JAL-2034 Added isDefined flag to SequenceGroup |
tree | commitdiff |
2017-05-23 |
gmungoc | JAL-2490 tidy code and tests for feature export in... |
tree | commitdiff |
next |