| 2006-07-21 |
amwaterhouse | getViewAsString can ignore sequenceGroup |
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| 2006-07-21 |
amwaterhouse | Show hide cols and rows |
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| 2006-07-19 |
amwaterhouse | Save output use whole alignment |
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| 2006-07-19 |
amwaterhouse | Copy works with selection area |
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| 2006-07-18 |
amwaterhouse | Use selection area with hidden columns in calculations |
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| 2006-07-13 |
amwaterhouse | DAS feature retrieval updated |
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| 2006-07-12 |
amwaterhouse | sequences are private in SequenceGroup |
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| 2006-07-07 |
amwaterhouse | changeColour is public |
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| 2006-06-23 |
amwaterhouse | Parse HTML links from jalview features file |
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| 2006-06-23 |
amwaterhouse | No need for repaint |
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| 2006-06-22 |
amwaterhouse | Fetch DBRefs |
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| 2006-06-15 |
amwaterhouse | Correct citation |
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| 2006-06-09 |
amwaterhouse | Feature and annotation parsing moved to io |
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| 2006-06-07 |
amwaterhouse | Wrap alignment added to preferences |
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| 2006-06-07 |
amwaterhouse | new DasSequenceFetcher |
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| 2006-05-17 |
amwaterhouse | Restrict annotation panel to 50% window on load |
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| 2006-05-12 |
amwaterhouse | pass viewport to fileloader, as we need to fireproperty... |
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| 2006-05-11 |
amwaterhouse | Recently loaded files, urls, append sequences to Alignment |
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| 2006-05-10 |
amwaterhouse | Copy and paste of annotations with seqrefs |
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| 2006-04-28 |
amwaterhouse | If autoCalculate selected, recalculate immediately |
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| 2006-04-19 |
amwaterhouse | Multiple views, alignpanels not being used |
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| 2006-04-19 |
amwaterhouse | Alignment might not have any annotations |
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| 2006-04-06 |
amwaterhouse | Hide ref to HiddenRegion |
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| 2006-04-06 |
amwaterhouse | Must copy feature settings from one frame to another... |
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| 2006-04-05 |
amwaterhouse | Padgap history |
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| 2006-04-04 |
amwaterhouse | loadDataFile is public |
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| 2006-04-04 |
amwaterhouse | Autocalculate consensus |
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| 2006-03-24 |
amwaterhouse | Load data file added |
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| 2006-03-16 |
amwaterhouse | historyItem.restore |
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| 2006-03-08 |
amwaterhouse | IdentifyFile should not be static |
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| 2006-02-24 |
amwaterhouse | Cannot delete residues |
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| 2006-02-16 |
amwaterhouse | translate cDNA adjusted |
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| 2006-02-16 |
amwaterhouse | Read startgroup and endgroup in features file |
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| 2006-02-15 |
amwaterhouse | Dont use FeatureFetcher if nucleotide |
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| 2006-02-13 |
amwaterhouse | Parsing features file - dont adjust for alignment position |
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| 2006-02-09 |
amwaterhouse | New implementation for holding search results |
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| 2006-02-08 |
amwaterhouse | Copy dataset annotations for paste(this) |
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| 2006-02-03 |
amwaterhouse | Reading features files readded as ref to FeatureRendere... |
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| 2006-01-30 |
amwaterhouse | Drop annotations onto alignment |
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| 2006-01-11 |
jprocter | refactored Alignframe padGaps code to Alignment and... |
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| 2005-12-22 |
amwaterhouse | Remove import |
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| 2005-12-08 |
amwaterhouse | If dataset seq exists for paste to existing alignment... |
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| 2005-12-06 |
amwaterhouse | Add features to dataset |
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| 2005-12-06 |
amwaterhouse | After merge |
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| 2005-10-03 |
amwaterhouse | Remove development code |
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| 2005-09-30 |
amwaterhouse | Remove redundancy in Eclipse |
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| 2005-09-22 |
amwaterhouse | Create instance of FormatAdapter |
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| 2005-09-22 |
amwaterhouse | If Mac user hasnt selected file format, give warning |
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| 2005-09-21 |
amwaterhouse | Sequences must be aligned before PCA |
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| 2005-09-20 |
amwaterhouse | PCAPanel just requires viewport |
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| 2005-09-19 |
amwaterhouse | Dont add ServiceListeners if desktop is null |
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| 2005-09-15 |
amwaterhouse | remove system.out |
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| 2005-09-14 |
amwaterhouse | Copy and paste uses FASTA format |
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| 2005-09-14 |
amwaterhouse | PCA is in outofmemory try-catch |
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| 2005-09-12 |
amwaterhouse | Remove gaps in regions, not char by char |
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| 2005-09-12 |
amwaterhouse | Update overview in alignmentChanged |
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| 2005-09-08 |
amwaterhouse | Move tree property change to treePanel |
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| 2005-09-08 |
amwaterhouse | If no consensus, disable certain colour options |
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| 2005-09-01 |
amwaterhouse | firePropertyChange if sequences deleted |
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| 2005-09-01 |
amwaterhouse | Use propertyListener for alignment edits |
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| 2005-08-30 |
amwaterhouse | Update colours after remove left, cut, paste |
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| 2005-08-29 |
amwaterhouse | Reset all colour schemes after gaps removed |
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| 2005-08-29 |
amwaterhouse | Keep startRes the same after removing columns |
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| 2005-08-29 |
amwaterhouse | Reset ClustalX after removing gaps |
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| 2005-08-26 |
amwaterhouse | When saving, use print instead of println |
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| 2005-08-23 |
amwaterhouse | Dont make new frame reference in Buildwebservicemenu |
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| 2005-08-23 |
amwaterhouse | Set size and location of frame before visible |
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| 2005-08-22 |
amwaterhouse | Check for null colour |
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| 2005-08-22 |
amwaterhouse | Conservation colour scheme is no more |
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| 2005-08-18 |
amwaterhouse | Add name and mouse listener to new user colour menuitems |
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| 2005-08-18 |
amwaterhouse | Blosum62 PID and conservation bug fixed |
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| 2005-08-18 |
jprocter | GUI typo |
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| 2005-08-17 |
jprocter | Gui Modifications for Service Discovery. |
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| 2005-08-17 |
amwaterhouse | updateUserColourMenu |
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| 2005-08-15 |
amwaterhouse | IgnoreGapsConsensus |
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| 2005-07-29 |
amwaterhouse | Correct label for end res in copy |
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| 2005-07-18 |
amwaterhouse | Copy seq ordering bug fixed |
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| 2005-07-11 |
amwaterhouse | Must check if group.sequences are null in remove gaps |
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| 2005-07-11 |
amwaterhouse | check groupsize is non zero |
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| 2005-07-07 |
amwaterhouse | Remove all gaps must check jSize |
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| 2005-06-30 |
amwaterhouse | Formatting changes |
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| 2005-06-16 |
amwaterhouse | Sort Groups modified |
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| 2005-06-16 |
amwaterhouse | remove gaps applies to selected area |
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| 2005-06-14 |
jprocter | pad-1 gaps fixed. |
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| 2005-06-14 |
amwaterhouse | Deselect sets annotationPanel activeres null |
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| 2005-06-14 |
amwaterhouse | PaintRefresher must be sent alignment |
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| 2005-06-14 |
amwaterhouse | Returns TreePanel when opening Newick |
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| 2005-06-08 |
amwaterhouse | Recalc accelerated |
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| 2005-06-08 |
amwaterhouse | Formatted source |
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| 2005-06-08 |
amwaterhouse | GPL license added |
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| 2005-06-03 |
jprocter | Reinstated 'create tree from selected region only'... |
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| 2005-06-02 |
amwaterhouse | Name of xml file changed |
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| 2005-05-30 |
jprocter | Added clustalW 'realignment' (primitive) |
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| 2005-05-30 |
jprocter | added default ClustalWS or MuscleWS to remove gaps. |
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| 2005-05-30 |
jprocter | fixed stacktrace potential for pairwise alignment action. |
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| 2005-05-27 |
jprocter | right ordering for RedundancyPanel constructor |
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| 2005-05-27 |
jprocter | recovered changes from v 1.84 |
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| 2005-05-27 |
amwaterhouse | New cut and paste |
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| 2005-05-26 |
jprocter | fixed redundancy Undo and allowed it to work on UNALIGN... |
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| 2005-05-26 |
jprocter | bug fix in jpred client. TreeViewer display state and... |
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| next |
git://source.jalview.org / jalview.git / history