todo
[jalview.git] / src / jalview / gui / AlignFrame.java
2010-02-09 jproctertodo
2009-10-14 jprocterquick fix for nullpointer in column selection when...
2009-08-21 jprocterprototype make groups from selection function and shift...
2009-07-24 jprocterheadless warning messages, prototype group annotation...
2009-06-19 jprocterdrag'n'drop a URL on to an alignment
2009-06-09 jprocterfix null pointer when new view is created then closed...
2009-06-08 jprocterensure listeners are deregistered when panel is closed...
2009-06-01 jproctermore graduated feature support
2009-02-06 jproctershowUnconserved view and group setting
2009-01-07 jprocteradded higher level method to enable the display of...
2008-12-19 jprocternew sort by length method, justify edit menu entries...
2008-12-15 jprocternew callback handler allowing threads that request...
2008-12-04 jprocterfetch database references for all EBI db + selected...
2008-11-12 jprocterselection sending and receiving, autoscrolling to highl...
2008-09-08 jprocterview settings in view submenu and user preferences...
2008-09-04 jproctermerge from 2_4_Release branch
2008-08-26 jprocternew thread for initting of DBRefFetcher with latest...
2008-08-26 jproctertooltip for fetch db refs and more generic regex for...
2008-08-15 jproctercheck for crossreferences every time the menus are...
2008-08-01 jprocternew SequenceFetcher gui and visual delay indication...
2008-07-18 jprocterSequence label colour stored for each sequence group
2008-04-29 jprocteradded SeqSearch service interface. Documented and refac...
2008-04-21 jprocteradded centre annotation labels menu entry (and commente...
2008-04-17 jproctertodo for refactoring webservice GUI creation mechanism
2008-02-22 jprocterOn 'save' menu entry check to see if fileformat is...
2008-01-29 jprocterjavadoc
2008-01-21 jprocterjavadoc
2007-12-21 jproctersequence db fetcher metadata for multiple sequence...
2007-11-16 jproctertodo for sortbyPID operating on current selection rathe...
2007-11-12 jprocterpublic method to indicate if there are progress bars...
2007-10-31 jprocterrejiggered loadDataFile and parseFeatureFile so JNet...
2007-10-31 jprocterjavadoc on webservice discovery method
2007-10-24 jprocterthread for product retrieval
2007-10-04 jprocterrefactored list of file extensions and file format...
2007-10-02 jprocteradded colSel as a parameter formatAdaptor print functio...
2007-08-22 jprocterpopup for non-fatal tree parsing error
2007-08-02 jprocterjavadoc and bugfix for 'save' when jalview is default...
2007-08-01 jprocterensure current dataset reference is passed to the cross...
2007-07-25 jprocterbugfix for vamsas demo and IO rearrangement for AMSAFil...
2007-07-13 jprocterpickmanager on sequence and alignment position, vamsas...
2007-05-10 jprocterdocumentation
2007-05-10 amwaterhouseDont duplicate annotations in multiple views
2007-05-08 amwaterhousecheck for null annotations
2007-05-02 jprocterundo stackempty error fix, refactored do and undo(...
2007-05-01 jproctersort-by-score works of sequence-annotation, not alignme...
2007-04-30 jprocterrebuild sort by scores menu when new annotation is...
2007-04-27 amwaterhousePut alignmentProperties in scrollpane
2007-04-27 jprocternewlines in alignment properties converted to <br>
2007-04-26 jprocteradded/tested sort by scores menu and added basic extrac...
2007-04-25 jproctergetContentPane().add alignmentProperties popup.
2007-04-25 amwaterhouseView Properties
2007-04-23 jprocterfunctions that operate on references to sequences in...
2007-04-23 amwaterhouseDbref fetcher takes sequences, not alignment
2007-04-20 jprocterglobal dbref fetch option in web services menu.
2007-04-19 jprocterfixed column selection cut/paste and self paste.
2007-04-19 amwaterhouseOnly setDropTarget if Desktop is not null
2007-04-17 jprocterpaste adds or creates full copies of objects in clipboa...
2007-04-13 amwaterhouseFeatureRenderer takes alignmentPanel
2007-04-12 amwaterhouseNumber pad keys can be used in cursor mode
2007-04-02 amwaterhouseAllow for scroll bar height
2007-04-02 amwaterhousedestroy destroyed
2007-04-02 amwaterhousedestroy destroyed
2007-04-02 amwaterhouseDestroy Alignment when closing frame
2007-03-22 amwaterhouseSet gatherViewsHere false when making a new tab
2007-03-19 jproctertranslate aligned cDNA to aligned peptide
2007-02-27 amwaterhouseUse paintAlignment
2007-02-12 amwaterhouseReload jar files
2007-02-09 jprocteradded 'show overview' preference.
2007-02-07 amwaterhouseFormatting
2007-02-07 amwaterhousereload, just close this frame and open a new one
2007-01-31 amwaterhouseCan edit annotation name/description
2007-01-31 amwaterhouseDont export annotations if not visible
2007-01-30 amwaterhouseOutput groups in annotation file
2007-01-29 amwaterhousescaleAbove, left and right set when tab selection changes
2007-01-25 amwaterhouseAnnotations move when full alignment edited
2007-01-24 amwaterhousePage setup added
2007-01-23 amwaterhouseboolean for internal copies
2007-01-23 amwaterhouseHidden representatives moved from sequence to viewport
2007-01-19 amwaterhouseNeeed to know protocol for annotation loading
2007-01-18 amwaterhouseFile Parsing returns Alignments, not Sequence[]
2007-01-04 amwaterhouseSend new sequences when firing alignment changed
2006-11-30 amwaterhouseWarning message if file was not saved, repaint ids...
2006-11-28 amwaterhouseTree title
2006-11-27 amwaterhouseCant save to a URL loaded Jar file
2006-11-27 amwaterhouseCant save to a URL loaded Jar file
2006-11-24 amwaterhouseseqColours null
2006-11-23 amwaterhouseIf alignment is closed, then undo performed in visible...
2006-11-23 amwaterhouseIf alignment is closed, then undo performed in visible...
2006-11-23 amwaterhouseIf alignment is closed, then undo performed in visible...
2006-11-23 amwaterhouseIf alignment is closed, then undo performed in visible...
2006-11-23 amwaterhouseAssociate PCA with multiple views
2006-11-22 amwaterhouseDynamically build tree sort menu when sort menu is...
2006-11-22 amwaterhouseRenaming viewNames
2006-11-21 jprocterfix unselectable tree leaf nodes when node mapping...
2006-11-21 amwaterhouseexpanded views, j2xml use setinitialtabvisible, close...
2006-11-21 amwaterhouseUse textColourChooser
2006-11-20 amwaterhouseexpand and gather
2006-11-20 amwaterhouselook for current alignframe to search
2006-11-15 amwaterhouseAdd remove seq from multiple views, must fire alignment...
2006-11-15 amwaterhouseright align ids
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