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Merge remote-tracking branch 'origin/tasks/JAL-3070_wsinterfaces' into alpha/JAL...
[jalview.git] / src / jalview / gui /
2018-11-08 Ben SoaresJAL-1988 JAVA 11 enabled version with Quit, Preferences... tree | commitdiff
2018-11-05 Ben SoaresJAL-1988 Investigating... tree | commitdiff
2018-11-05 Ben SoaresJAL-3141 couple of minor fixes for example files being... tree | commitdiff
2018-11-02 Ben SoaresJAL-3141 Tests now available and working, bringing... tree | commitdiff
2018-11-01 Ben SoaresJAL-3141 Preferences 'Backups' tab now fits. Moved... tree | commitdiff
2018-10-31 Ben SoaresJAL-3141 Preferences 'Backups' tab now working. Doesn... tree | commitdiff
2018-10-25 Ben SoaresJAL-3141 Ostensibly all backups working for alignment... tree | commitdiff
2018-10-16 Jim ProcterJAL-3127 reinstate ability to set sequence ID colour... tree | commitdiff
2018-10-16 Jim ProcterJAL-3127 use AlignViewportI.addGroup to create & propag... tree | commitdiff
2018-10-16 Jim ProcterJAL-3127 use AlignViewportI.addGroup() to add group... tree | commitdiff
2018-10-16 Jim Procterviewport flag to indicate when structure view needs... tree | commitdiff
2018-10-09 Jim ProcterJAL-3127 TODO - resolve reference to Viewport for group... tree | commitdiff
2018-10-09 Jim ProcterJAL-3127 pass reference to AlignViewportI when creating... tree | commitdiff
2018-10-08 gmungocJAL-1244 comments, javadoc, method signature tweaks feature/JAL-1244stretchStatusMsg tree | commitdiff
2018-10-08 gmungocJAL-1244 editSequence extract method refactoring tree | commitdiff
2018-10-05 gmungocJAL-1244 improved status message for insert/delete gap tree | commitdiff
2018-10-04 gmungocJAL-3132 status message for sequence and/or graph group... tree | commitdiff
2018-10-04 gmungocJAL-1244 no status message (yet) for locked edit of... tree | commitdiff
2018-10-04 gmungocJAL-1244 status message for insert/delete gaps on singl... tree | commitdiff
2018-10-04 gmungocJAL-1244 status message while dragging a stretch group tree | commitdiff
2018-10-04 gmungocJAL-3132 set status message when over sequence id or... tree | commitdiff
2018-10-04 gmungocJAL-3093 unit tests, no mouse action over left/right... tree | commitdiff
2018-10-03 gmungocJAL-3093 tweaks to code and test for 3px gap above... tree | commitdiff
2018-10-02 gmungocJAL-3093 unit tests for SeqPanel.findMousePosition tree | commitdiff
2018-10-02 gmungocJAL-3093 limited Consensus popup menu when in wrapped... tree | commitdiff
2018-10-02 gmungocJAL-3093 added MousePos.isOverAnnotation() for extra... tree | commitdiff
2018-10-01 gmungocJAL-3093 'read-only' annotations when in wrapped mode tree | commitdiff
2018-10-01 gmungocJAL-3093 refactor (+test) Annotation Labels tooltip... tree | commitdiff
2018-10-01 gmungocJAL-3093 show annotation tooltips and status message... tree | commitdiff
2018-09-28 gmungocJAL-3063 service param files read/saved using JAXB... tree | commitdiff
2018-09-27 gmungocJAL-2791 refactored Export Features to apply all visibi... tree | commitdiff
2018-09-26 gmungocJAL-3125 tidy up tree | commitdiff
2018-09-26 gmungocJAL-3125 avoid slider 'rounding' threshold field value tree | commitdiff
2018-09-21 gmungocJAL-3120 preserve feature colour/mincolour/maxcolour... bug/JAL-3120restoreFeatureColour tree | commitdiff
2018-09-19 gmungocJAL-3120 preserve plain colour value when changing... tree | commitdiff
2018-09-19 Jim ProcterJAL-2808 JAL-3026 deleted all commented out tab code... tree | commitdiff
2018-09-19 gmungocJAL-2808 JAL-3032 drop tabbed layout for Colours and... tree | commitdiff
2018-09-19 gmungocJAL-3063 use JAXB for 'Save as Project' and load projec... tree | commitdiff
2018-09-18 gmungocJAL-3063 Save/Load user defined colours using JAXB tree | commitdiff
2018-09-18 gmungocJAL-3063 Save/Load user colour scheme using JAXB tree | commitdiff
2018-09-18 gmungocJAL-3063 New View via JAXB tree | commitdiff
2018-09-18 gmungocJAL-3063 temporary extra menu option to save/load proje... tree | commitdiff
2018-09-18 Jim ProcterJAL-3035 more dedasification tree | commitdiff
2018-09-14 gmungocJAL-3116 parse EMBL XML with JAXB (todo: update unit... tree | commitdiff
2018-09-11 Jim ProcterMerge branch 'develop' into releases/Release_2_11_Branch tree | commitdiff
2018-09-10 gmungocJAL-3099 use Alignment.getVisibleWidth() where wanted bug/JAL-3099alignmentVisibleWidth tree | commitdiff
2018-09-10 gmungocJAL-3097 adjust viewport width on hiding columns bug/JAL-3097blankExtraColumns tree | commitdiff
2018-09-10 gmungocJAL-3108 fix concurrency bug in Reveal action handler tree | commitdiff
2018-09-07 Jim ProcterJAL-3107 update any group associated annotation rows... tree | commitdiff
2018-09-07 Jim ProcterJAL-3105 fix for focus transfer after window closed... tree | commitdiff
2018-09-06 Jim ProcterJAL-3091 code committed in error (failed patch for... tree | commitdiff
2018-09-06 Jim ProcterJAL-3091 release notes for JAL-3104 tree | commitdiff
2018-09-06 Jim ProcterJAL-2854 compute visible annotation panel height and... tree | commitdiff
2018-08-31 Jim ProcterJAL-3095 account for sequence start when highlighting... tree | commitdiff
2018-08-31 Jim ProcterMerge branch 'releases/Release_2_10_5_Branch' of source... tree | commitdiff
2018-08-31 Jim Procterjava doc and fix for JAL-3095 - region of trimmed RNA... tree | commitdiff
2018-08-31 gmungocJAL-3003 remove redundant call to drawSelectionGroup tree | commitdiff
2018-08-28 gmungocJAL-3059 use correct border colour for groups tree | commitdiff
2018-08-28 gmungocJAL-3003 draw selection group outline on main graphics... tree | commitdiff
2018-08-28 gmungocJAL-247 comment to clarify wrapped print algorithm tree | commitdiff
2018-08-28 gmungocJAL-247 print/export wrapped uses common code to draw... tree | commitdiff
2018-08-28 gmungocJAL-3087 include full alignment height in repeating... tree | commitdiff
2018-08-28 gmungocJAL-247 draw/print sequence ids now uses common code... tree | commitdiff
2018-08-16 gmungocJAL-3082 handle regex error, exclusive threshold, unit... tree | commitdiff
2018-08-15 gmungocJAL-3080 remove tree partition if no groups created feature/JAL-3080clearTreeGroups tree | commitdiff
2018-08-14 gmungocJAL-3078 reset Tree font (only!) on Cancel bug/JAL-3078cancelTreeFont tree | commitdiff
2018-08-06 Jim ProcterJAL-3070 TODO for mateusz tree | commitdiff
2018-07-26 Jim ProcterJAL-3070 UIinfo provides JobParameterStoreI tree | commitdiff
2018-07-25 gmungocJAL-3073 select columns if dragging sideways in a graph... bug/JAL-3072scrollThread tree | commitdiff
2018-07-25 gmungocJAL-3074 don't scroll up/down on drag out of scale... tree | commitdiff
2018-07-25 gmungocJAL-3072 SeqPanel.stopScrolling on mouse up in scale... tree | commitdiff
2018-07-23 Jim ProcterJAL-3070 pushed down JABAWS specific args for WsJobPara... tree | commitdiff
2018-07-23 Jim Procter final merge for merge/wsinterfaces_mchmmer_JAL-3070_JA... tree | commitdiff
2018-07-23 Jim ProcterMerge branch 'features/mchmmer' into merge/wsinterfaces... tree | commitdiff
2018-07-20 Jim ProcterJAL-3070 pull up hostURL and postURL to UIinfo and... tree | commitdiff
2018-07-20 Jim ProcterJAL-3070 core service descriptors for JABAWS services... tree | commitdiff
2018-07-18 Jim ProcterMerge branch 'features/mchmmer' into features/mchmmer_m... features/mchmmer_merge_JAL-1950 tree | commitdiff
2018-07-03 gmungocJAL-3054 table tooltip follow mouse in a sensible manner bug/JAL-3049colourCellTooltip tree | commitdiff
2018-06-29 gmungocJAL-3049 removed wrong way to set tooltip tree | commitdiff
2018-06-29 gmungocJAL-3049 JAL-2069 colour icon tooltip including by... tree | commitdiff
2018-06-29 gmungocJAL-3049 working tooltip on colours column tree | commitdiff
2018-06-26 Jim ProcterJAL-3035 - jalview-das is no more ! tree | commitdiff
2018-06-06 gmungocJAL-2956 don't load (non-existent) HMMER jar entry... tree | commitdiff
2018-06-05 Jim ProcterJAL-3009 news reader thread should be in background... bugs/JAL-3009_blockingNetworkThreads tree | commitdiff
2018-06-05 Jim ProcterJAL-3009 Identifiers.Org retrieval on background thread. tree | commitdiff
2018-06-05 gmungocJAL-3011 include annotation scores in sequence id toolt... tree | commitdiff
2018-06-05 gmungocMerge branch 'develop' into features/mchmmer tree | commitdiff
2018-05-31 Jim ProcterJAL-3011 - show score in annotation row - looks like... tree | commitdiff
2018-05-31 gmungocJAL-2808 don't capture or report min-max for mixed... tree | commitdiff
2018-05-31 Jim ProcterMerge branch 'spike/JAL-1950_hmmer3client' into feature... tree | commitdiff
2018-05-31 Jim ProcterMerge branch 'develop' into spike/JAL-1950_hmmer3client tree | commitdiff
2018-05-31 gmungocJAL-2808 pre-fill numeric inequality filter with min... tree | commitdiff
2018-05-30 gmungocJAL-3005 JAL-3008 render file chooser and radio button... tree | commitdiff
2018-05-28 gmungocMerge branch 'develop' into features/mchmmer tree | commitdiff
2018-05-28 gmungocMerge branch 'bug/JAL-797' into develop tree | commitdiff
2018-05-28 gmungocMerge remote-tracking branch 'origin/releases/Release_2... tree | commitdiff
2018-05-25 gmungocJAL-3002 don't use fastPaint for page up/down bug/JAL-3002fastPaintWrapped tree | commitdiff
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2992panelHeight' into releases... tree | commitdiff
2018-05-25 Jim ProcterMerge branch 'bug/JAL-1460_dragndropWindows' into relea... tree | commitdiff
2018-05-25 gmungocJAL-2992 simpler heuristic for available height bug/JAL-2992panelHeight tree | commitdiff
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