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Features added removed from alignment
[jalview.git]
/
src
/
jalview
/
gui
/
2005-11-29
amwaterhouse
Features added removed from alignment
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commitdiff
2005-11-29
amwaterhouse
Save features and pdbids
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commitdiff
2005-11-28
amwaterhouse
new Implementation for getting colour quickly
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commitdiff
2005-11-28
amwaterhouse
wrapped alignment 1 larger
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commitdiff
2005-11-25
amwaterhouse
Must follow alignmentPosition
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commitdiff
2005-11-25
amwaterhouse
Comment out test lines
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commitdiff
2005-11-24
amwaterhouse
Don't parse input id, leave it as it is
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commitdiff
2005-11-18
amwaterhouse
Add PDB accession to new sequence
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commitdiff
2005-11-18
amwaterhouse
Show error message outside thread loop
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commitdiff
2005-11-17
amwaterhouse
Hidden tabs and vamsas refs for beta release
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commitdiff
2005-11-17
amwaterhouse
No more isOverview
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commitdiff
2005-11-17
amwaterhouse
If overview is visible, update it
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commitdiff
2005-11-17
amwaterhouse
no more show translation
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commitdiff
2005-11-17
amwaterhouse
Hide Tab settings for build
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commitdiff
2005-11-17
amwaterhouse
Use setRGB rather than color, fillrect
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commitdiff
2005-11-17
amwaterhouse
Optimized Overview
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commitdiff
2005-11-16
amwaterhouse
Highlight from alignment
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commitdiff
2005-11-14
amwaterhouse
Catch exceptions
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commitdiff
2005-11-11
amwaterhouse
No new PDBViewer
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commitdiff
2005-11-11
amwaterhouse
SequenceFetcher new class
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commitdiff
2005-11-11
amwaterhouse
PNG and EPS in ImageMaker
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commitdiff
2005-11-10
amwaterhouse
Allow featuresettings to be enabled on load
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commitdiff
2005-11-10
amwaterhouse
AlignSeq takes printstream as arg
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commitdiff
2005-11-10
amwaterhouse
Set PDBViewer
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commitdiff
2005-11-10
amwaterhouse
Use Antialiasing
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commitdiff
2005-11-10
amwaterhouse
PDB implementation updated
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commitdiff
2005-11-10
amwaterhouse
If selectionGroup is null, return
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commitdiff
2005-11-10
amwaterhouse
Return accurate RGB for transparent residues
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commitdiff
2005-11-10
amwaterhouse
Make cancelled public variable
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commitdiff
2005-11-08
amwaterhouse
getVersion added for Castor mapping
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commitdiff
2005-11-04
amwaterhouse
Id parsing moved to Sequence
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commitdiff
2005-11-04
amwaterhouse
Display full id in trees
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commitdiff
2005-11-04
amwaterhouse
Use visible id for sorting
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commitdiff
2005-11-02
amwaterhouse
Load and save Feature Colour Settings
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commitdiff
2005-11-01
amwaterhouse
Wrap long description in table
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commitdiff
2005-11-01
jprocter
dataset reference propagated to new MsaWS alignment.
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commitdiff
2005-11-01
amwaterhouse
disulfide bond exceptions
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commitdiff
2005-11-01
amwaterhouse
Adjust seq limits for visual and dataset sequences
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commitdiff
2005-10-31
amwaterhouse
dbPrefix and jvsuffix added
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commitdiff
2005-10-31
amwaterhouse
getDisplayId changed
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commitdiff
2005-10-31
amwaterhouse
jalviewClipboard added
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commitdiff
2005-10-31
amwaterhouse
Display only selected features
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commitdiff
2005-10-31
amwaterhouse
DBPrefix and JVSuffix added
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commitdiff
2005-10-31
amwaterhouse
FeatureRenderer doenst use groups
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commitdiff
2005-10-31
amwaterhouse
Sequence.getDatasetSequence().getFeatures
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commitdiff
2005-10-31
amwaterhouse
Use fontmetrics to tidy up display
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commitdiff
2005-10-27
amwaterhouse
Moved vector features
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commitdiff
2005-10-27
amwaterhouse
Allow old style groups file
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commitdiff
2005-10-26
amwaterhouse
Groups file is now feature file
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commitdiff
2005-10-26
amwaterhouse
vamsasDemo new branch
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commitdiff
2005-10-07
amwaterhouse
getalignment method added
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commitdiff
2005-10-07
amwaterhouse
Select all cutandpaste
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commitdiff
2005-10-03
amwaterhouse
Remove float width
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commitdiff
2005-10-03
amwaterhouse
Request focus for new frames
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commitdiff
2005-10-03
amwaterhouse
Return if no searchString
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commitdiff
2005-10-03
amwaterhouse
Keylistener added to internalFrame
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commitdiff
2005-10-03
amwaterhouse
Remove development code
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commitdiff
2005-09-30
amwaterhouse
Remove redundancy in Eclipse
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commitdiff
2005-09-29
amwaterhouse
Take into account scroll value
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commitdiff
2005-09-27
amwaterhouse
Show labels in wrapped view
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commitdiff
2005-09-23
amwaterhouse
Draw labels, anti alias
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commitdiff
2005-09-23
amwaterhouse
Right click copy/paste popup
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commitdiff
2005-09-23
amwaterhouse
Now an InternalFrame with menus
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commitdiff
2005-09-22
amwaterhouse
SetAnnotationVisible - ignore if wrapped
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commitdiff
2005-09-22
amwaterhouse
Dont calculate conservation for nucleotides
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commitdiff
2005-09-22
amwaterhouse
Create instance of FormatAdapter
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commitdiff
2005-09-22
amwaterhouse
Display nucleotides
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commitdiff
2005-09-22
amwaterhouse
Break if regex not found
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commitdiff
2005-09-22
amwaterhouse
If Mac user hasnt selected file format, give warning
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commitdiff
2005-09-22
amwaterhouse
Wrap alignment with annotations
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commitdiff
2005-09-21
amwaterhouse
Jalview
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commitdiff
2005-09-21
amwaterhouse
Sequences must be aligned before PCA
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commitdiff
2005-09-21
amwaterhouse
Next active Frame losing focus bug fixed
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commitdiff
2005-09-20
amwaterhouse
Checks end of sequence before drawing text
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commitdiff
2005-09-20
amwaterhouse
PCAPanel just requires viewport
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commitdiff
2005-09-20
amwaterhouse
Help gets bounds from help map file
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commitdiff
2005-09-20
amwaterhouse
New methods in treePanel
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commitdiff
2005-09-20
amwaterhouse
Null pointer if user presses shift before anything...
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commitdiff
2005-09-20
amwaterhouse
Align labels format left
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commitdiff
2005-09-20
amwaterhouse
Optimise graphics copy object
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commitdiff
2005-09-20
amwaterhouse
Use selectionGroup to find chosen sequences
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commitdiff
2005-09-20
amwaterhouse
Make sure fontmetrics is not null
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commitdiff
2005-09-19
amwaterhouse
Make sure fontmetrics exists for headless state
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commitdiff
2005-09-19
amwaterhouse
Dont add ServiceListeners if desktop is null
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commitdiff
2005-09-19
amwaterhouse
Alignment of node labels modified
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commitdiff
2005-09-19
amwaterhouse
ShowDistances, placeHolders and bootstraps have their...
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commitdiff
2005-09-16
amwaterhouse
Check image is not null in fast paint
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commitdiff
2005-09-16
amwaterhouse
Set distanceMenu selected true
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commitdiff
2005-09-15
amwaterhouse
OptionPane warning for out of memory
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commitdiff
2005-09-15
amwaterhouse
remove system.out
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commitdiff
2005-09-15
amwaterhouse
Remove key listener
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commitdiff
2005-09-14
amwaterhouse
Move bootStrap/distance settings outside thread
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commitdiff
2005-09-14
amwaterhouse
Add end of consensus test for wrapped edit
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commitdiff
2005-09-14
amwaterhouse
Make new frame selected
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commitdiff
2005-09-14
amwaterhouse
Copy and paste uses FASTA format
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commitdiff
2005-09-14
amwaterhouse
Call methods in treeCanvas on init
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commitdiff
2005-09-14
amwaterhouse
offy changes
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commitdiff
2005-09-14
amwaterhouse
OutOfMemory try catch
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commitdiff
2005-09-14
amwaterhouse
Use font size, not font height
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commitdiff
2005-09-14
amwaterhouse
Use getTreeFont instead of getFont
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commitdiff
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