group consensus/conservation calculated from start to end
[jalview.git] / src / jalview / gui /
2009-08-21 jproctergroup consensus/conservation calculated from start...
2009-08-21 jprocterviewport setting for displaying sequence logos
2009-08-21 jprocterreversed order of addition of group consensus and conse...
2009-08-21 jprocterprototype make groups from selection function and shift...
2009-08-21 jprocterrace condition null pointer bugfix
2009-08-21 jprocterbugfix
2009-08-21 jproctertodo for 2.5
2009-08-21 jprocternull pointer exception bug fix
2009-08-03 jprocterfix feature creation for selected region beyond end...
2009-07-24 jprocterupdate annotation when group state is changed
2009-07-24 jproctercolour by label prototype flag
2009-07-24 jproctercatch null pointer exception in headless context
2009-07-24 jprocterget consensus sequence and set ignore gaps flag for...
2009-07-24 jprocterannotation update method synchronises group annotation
2009-07-24 jprocterheadless warning messages, prototype group annotation...
2009-07-24 jprocterrefactored conservation thread, added showgroupannotati...
2009-07-24 jprocterconservation thread refactored from AlignViewport
2009-06-24 jproctercan use whitespace, comma or semicolon to separate IDs
2009-06-19 jprocterselection handler and sender bugfix
2009-06-19 jproctertodo
2009-06-19 jprocterselections sent when mouse is released (drags on ID...
2009-06-19 jprocterprogress bars (still need to be threaded properly)...
2009-06-19 jproctersmoother scroll-to-position action
2009-06-19 jprocterdrag'n'drop a URL on to an alignment
2009-06-12 jproctermethods for importing anonymous vamsas documents into...
2009-06-12 jprocternullpointer bugfix (possibly not needed - was an error...
2009-06-12 jprocterrecover pdb from jalview-xml in vamsas doc
2009-06-12 jproctersend selection on drag over sequence ids
2009-06-12 jprocterretrieve and init vamsas session from vdoc at URL
2009-06-09 jprocterfix null pointer when new view is created then closed...
2009-06-08 jprocterrefactored public methods for non-interactive import...
2009-06-08 jprocterrefactored for non-interactive import and initiation...
2009-06-08 jproctersequence scores only shown if they vary. shift stops...
2009-06-08 jprocterdebug messages and graceful recovery when structure...
2009-06-08 jprocterbetter thread safety for tooltip. apply gpl development...
2009-06-08 jprocterensure listeners are deregistered when panel is closed...
2009-06-08 jprocterensure listeners are deregistered when panel is closed...
2009-06-08 jprocterapply gpl development license
2009-06-01 jproctermore graduated feature support
2009-06-01 jprocterproperly export graduated colour features
2009-06-01 jprocterprototype function for relabelling treenodes with diffe...
2009-06-01 jprocterbetter tooltip placement in alignment window
2009-03-31 jprocterprototype for store/restore of feature colour gradient...
2009-03-17 jprocterallow configuration of graduated colour
2009-03-17 jprocterquantitative shading of features by GraduatedColor
2009-03-17 jprocterprototype dialog for setting feature display shading...
2009-03-17 jproctersortbytree view setting and action added - setting...
2009-02-24 jprocterbetter tooltip display and placement, cope with linkOnl...
2009-02-24 jprocterdebugging selection message send/receive
2009-02-24 jprocteronly display unique url links (both in label and in...
2009-02-24 jprocterbugfix for occasional nullpointer exceptions when selec...
2009-02-24 jprocterchange method signature to allow caller to test if...
2009-02-06 jprocterupdated jalview reference
2009-02-06 jproctershowUnconserved view and group setting
2009-01-09 jprocterhack to completely disable calculation of consensus...
2009-01-09 jprocterbugfix
2009-01-07 jprocterensure that the DAS sequence source checkbox is checked...
2009-01-07 jproctercheck for features on the retrieved sequences
2009-01-07 jprocterrefactor
2009-01-07 jprocteradded higher level method to enable the display of...
2008-12-19 jprocterexperimental: sort by feature UI in feature settings...
2008-12-19 jprocternew sort by length method, justify edit menu entries...
2008-12-19 jproctercatch null pointer exception when no colourscheme is...
2008-12-15 jprocterwarning for failed parsing of newick strings
2008-12-15 jprocternew callback handler allowing threads that request...
2008-12-08 jprocterdisplay feature score in tooltip
2008-12-08 jprocterexperimental buttons for sort on score/density and...
2008-12-05 jproctersupport for multiple accession retrieval from a databas...
2008-12-04 jprocterfetch database references for all EBI db + selected...
2008-12-04 jprocterdas source browser uses local source method from jalvie...
2008-11-12 jprocterselection sending and receiving, autoscrolling to highl...
2008-11-12 jprocterselection sending and receiving, autoscrolling to highl...
2008-11-12 jprocterselection sending
2008-11-12 jprocternew ID constructor and selection sending
2008-11-12 jprocternew constructors for setting IDs
2008-11-12 jprocternew window discovery and alignment view navigation...
2008-11-12 jprocterjar inputstream provider enabling multiple jar entries...
2008-09-09 jproctershow non-positional features with same code as positona...
2008-09-09 jprocterrefactored feature tooltip generation code to static...
2008-09-09 jprocternon-positional features are displayed with additional...
2008-09-09 jproctermake URL links from description string when link is...
2008-09-08 jprocterview settings in view submenu and user preferences...
2008-09-08 jprocterintroduced and commented out code for generating URLs...
2008-09-04 jproctermerge from 2_4_Release branch
2008-08-26 jprocterset title of viewer frame after file has been loaded...
2008-08-26 jprocterfuture bug fix todo
2008-08-26 jprocternew thread for initting of DBRefFetcher with latest...
2008-08-26 jprocteradded singleton access method to retrieve the latest...
2008-08-26 jproctertooltip for fetch db refs and more generic regex for...
2008-08-20 jproctertooltip displays formatted annotation row description...
2008-08-19 jprocterbeginning of fix for embl/cds/highlighting IO in https...
2008-08-19 jprocterfix for arrayoutofbounds bug when secondary structure...
2008-08-19 jprocterregex links for launching URL from single click on...
2008-08-15 jprocterupdate text and version checker
2008-08-15 jprocterdialog size on macs
2008-08-15 jproctercheck for crossreferences every time the menus are...
2008-08-15 jproctercatch invalid URL link exception properly
2008-08-15 jprocterincrease height of dialog
2008-08-15 jprocterallow '|' in regex for URL links to be recovered from...
2008-08-13 jproctercheck for null viewport on dataset recovery
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