ensure lastSeq is refreshed if new feature added
[jalview.git] / src / jalview / gui /
2006-11-07 amwaterhouseTidy up group size after alignmentChanged
2006-11-07 amwaterhouseAdd keylistener to InternalFrame, not canvas
2006-11-06 amwaterhouseOnly recalc consensus for start to end of group
2006-11-06 amwaterhousedont limit menu size
2006-11-06 amwaterhouseaccelerators, save menu item
2006-11-03 amwaterhouseAlignpanel is not new if copied from j2xml
2006-11-03 amwaterhouseRemove unnecessary refresh
2006-11-03 amwaterhouseUse Jalview2XML to copy AlignmentPanel
2006-11-02 amwaterhousereturn if image is null
2006-11-02 amwaterhouseUpdate editMenuBar after alignment changed
2006-11-02 amwaterhouseSet menu state in alignFrame
2006-11-02 amwaterhouseFire align change for case change
2006-11-02 amwaterhouseHistory is per viewport
2006-11-02 amwaterhouseselected states set in updateMenusFromViewport
2006-10-30 amwaterhouseFix for feature name amended
2006-10-30 amwaterhouseUpdate features
2006-10-30 amwaterhouseconservation lock
2006-10-27 amwaterhouseRemove consensus annotation if out of memory
2006-10-27 amwaterhouseupdatingConsensus, updatingConservation is static ...
2006-10-27 amwaterhousePaintRefresher can calculate seqs added or removed
2006-10-27 amwaterhouseDont remove or add PaintRefresher registrations for...
2006-10-27 amwaterhouse-1 error
2006-10-27 amwaterhouseReset colour schemes and alignmentChanged moved to...
2006-10-26 amwaterhouseOnly adds history item if size>0
2006-10-26 amwaterhousevoid changeCase(ActionEvent e
2006-10-26 amwaterhouseset quality to null if removed
2006-10-26 amwaterhouseshowConservation, quality, identity not used
2006-10-26 amwaterhouseDont readd the undo
2006-10-26 amwaterhousesequence may be null if hidden or deleted
2006-10-26 amwaterhouseSet alignFrame of gathered panels to be the source...
2006-10-26 amwaterhouseremove gaps size range
2006-10-26 amwaterhouseDont scroll off width-1
2006-10-25 amwaterhouseReturn if negative width, ie alignment deleted
2006-10-25 amwaterhouseGet sequence in routine
2006-10-25 amwaterhouseviewport.hasHiddenColumns updated after undo/redo performed
2006-10-25 amwaterhouseEditCommand added to AlignFrame
2006-10-24 amwaterhouseMust set alignIndex before delete takes place
2006-10-24 amwaterhouseUse EditCommand.Cut
2006-10-24 amwaterhouseHistoryItem replaced by CommandI
2006-10-24 amwaterhouseEditCommand implemented
2006-10-24 amwaterhousemust translate graphics back the same amountcvs diff...
2006-10-24 amwaterhouseChange Case is undoable
2006-10-24 amwaterhouseSequenceIndex might be beyond old height
2006-10-24 amwaterhouseMust catch image outOfMemoryError
2006-10-18 amwaterhouseshowqual, showcons never used
2006-10-18 amwaterhouseremove html and body from tooltip
2006-10-18 amwaterhousenew feature args
2006-10-18 amwaterhouseCan set description for new features
2006-10-18 amwaterhouseFaded anntotations when recalculating
2006-10-18 amwaterhouseset conserve and quality null if outofmemory
2006-10-18 amwaterhouseNo longer a FeatureListener
2006-10-12 amwaterhouseshowQuality may be updated during archive file load
2006-10-12 amwaterhouseAdd features from Popupmenu
2006-10-12 amwaterhouseUse i, not index if not representedSeqs
2006-10-12 amwaterhouseIf conservation is null, disable Blosum62 and conservat...
2006-10-12 amwaterhouseAnnotasiont[j] might be null
2006-10-12 amwaterhouseLocal adjustForhiddenSeqs routine
2006-10-12 amwaterhouseRepresentGroup count items
2006-10-10 amwaterhouseNo need to find index when deleting
2006-10-10 amwaterhouseCalculate alWidth earlier
2006-10-10 amwaterhouseMust repaint whole alignPanel
2006-10-10 amwaterhouseOnly getGroups once if groupEditingcvs update
2006-10-10 amwaterhouseaaIndex replaces aaHash
2006-10-10 amwaterhouseConsensus and conservation updated in threads
2006-10-09 jprocterimported Vamsas bindings and alpha vamsas client code...
2006-10-09 jprocterset firstColumn property for an alignmentView object.
2006-10-06 jprocterAdded filter so that input to a JPred job is *solely...
2006-10-06 amwaterhouseAAFrequency optimized
2006-10-05 amwaterhouseMultiple Views
2006-10-03 amwaterhouseCheck annotation is editable
2006-09-27 jprocterfixed tree building exception when one residue or a...
2006-09-18 amwaterhouseDraw hidden column marker correctly
2006-09-18 amwaterhouseclick node to select sequences
2006-09-12 amwaterhousehideSequence hide all before recalc consensus
2006-09-12 amwaterhouseAllow alt for group editing
2006-09-11 amwaterhouseComment out lower case colouring for bug fix release
2006-09-11 amwaterhouseRemove system.outs
2006-09-11 amwaterhouseget idWidth should use italic font when getting size
2006-09-11 amwaterhousevisWidth allows borders to be drawn around offscreen...
2006-09-11 amwaterhouseRemove system.out
2006-09-11 amwaterhousegetVisibleIdWidth() for making images
2006-09-07 jprocteradded copy consensus sequence to consensus annotation...
2006-09-01 amwaterhouseFeature Settings
2006-08-30 amwaterhouseGraphHeight might be zero
2006-08-30 amwaterhouseUser colours are case sensitive
2006-08-29 amwaterhouseCan shrink graph to zero
2006-08-29 amwaterhousecreateMapping alreadyMapped
2006-08-29 amwaterhouseAdditional repaint
2006-08-29 amwaterhousejnetfile can be loaded onto alignment
2006-08-22 amwaterhouseTo uppercase only visible
2006-08-22 amwaterhouseRemove group when hiding cols from scalePanel
2006-08-22 jprocteroff by one bug in hiden column unmarshalling
2006-08-21 amwaterhouseheader updated
2006-08-21 amwaterhousevalidate groupPanel
2006-08-21 amwaterhousevalidate groupPanel
2006-08-21 amwaterhouseAdd uniprot DBref
2006-08-21 jprocterRefactored Jnet and added hidden columns support.
2006-08-18 amwaterhouseCheck colourScheme is not null - jalview prior 2.5...
2006-08-18 amwaterhouseOnly discover DAS sources if panel shown
2006-08-18 amwaterhouseonly set new layout if 2 buttons visible
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