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proper vamsas style binding of alignment sequence objects to newick node labels....
[jalview.git] / src / jalview / gui /
2007-08-22 jprocterpopup for non-fatal tree parsing error tree | commitdiff
2007-08-22 jprocterquick fix for exceptions due to invalid embl refs tree | commitdiff
2007-08-22 jprocterfix serious repetitive exceptions if user closes colour... tree | commitdiff
2007-08-22 jproctercatch occasional -ve imgWidth exception tree | commitdiff
2007-08-13 jprocterfixed typo in new 2_3 startup file default value tree | commitdiff
2007-08-02 jprocterjavadoc and bugfix for 'save' when jalview is default... tree | commitdiff
2007-08-01 jprocterensure current dataset reference is passed to the cross... tree | commitdiff
2007-07-25 jprocterbugfix for vamsas demo and IO rearrangement for AMSAFil... tree | commitdiff
2007-07-13 jprocterpickmanager on sequence and alignment position, vamsas... tree | commitdiff
2007-07-13 jprocterupdated to iscb demo vamsas-client version tree | commitdiff
2007-06-17 jproctervamsas mouseOvers tree | commitdiff
2007-06-17 jprocterenable mouseover between DNA coding regions and transla... tree | commitdiff
2007-06-17 jproctermouseOver highlighting and broadcasting efficiency tree | commitdiff
2007-06-17 jprocterthread safety during repaint tree | commitdiff
2007-06-17 jprocternull pointer exception fix tree | commitdiff
2007-05-22 jprocterrefactored document objects and bugfix on jvdataset... tree | commitdiff
2007-05-22 amwaterhouseDONT SET PICKING LABEL tree | commitdiff
2007-05-18 jprocterupdate to and from document (and remove deprecated... tree | commitdiff
2007-05-18 jprocterremoved uneccessary vamsasLoad commented out. tree | commitdiff
2007-05-17 jprocterrefining - still debugging. tree | commitdiff
2007-05-17 jprocteruse of proper vamsas client API by Jalview tree | commitdiff
2007-05-17 jproctermodified castor-1.1 library and refactored uk.ac.vamsas tree | commitdiff
2007-05-15 amwaterhouseSequenceListener highlights SearchResults, not just... tree | commitdiff
2007-05-10 jprocterdocumentation tree | commitdiff
2007-05-10 amwaterhousevisibility setting tree | commitdiff
2007-05-10 amwaterhouseKeep record of last tooltip tree | commitdiff
2007-05-10 amwaterhouseVisible state of annotation tree | commitdiff
2007-05-10 amwaterhouseAdd show all hidden menu tree | commitdiff
2007-05-10 amwaterhouseDont duplicate annotations in multiple views tree | commitdiff
2007-05-09 amwaterhouseminor formatting of tooltip tree | commitdiff
2007-05-08 amwaterhousecheck for null annotations tree | commitdiff
2007-05-08 amwaterhouseset picking label tree | commitdiff
2007-05-08 amwaterhouseinstant update when seq colour is pressed tree | commitdiff
2007-05-08 amwaterhousemust specify .CA tree | commitdiff
2007-05-08 amwaterhousesmall sphere for alpha carbon tree | commitdiff
2007-05-07 amwaterhouseImage size must allow for scale height tree | commitdiff
2007-05-07 amwaterhousedif is never used tree | commitdiff
2007-05-07 amwaterhouseAllow for large font sizes tree | commitdiff
2007-05-07 amwaterhousedont use gold highlights tree | commitdiff
2007-05-07 amwaterhouseMax width for tooltip tree | commitdiff
2007-05-07 amwaterhousestill trying to prevent null painting tree | commitdiff
2007-05-07 amwaterhouseUse id hash to add pdb mappings back to alignment tree | commitdiff
2007-05-07 amwaterhousePDBViewer available if necessary tree | commitdiff
2007-05-04 amwaterhouseCheck bounds of loaded comp tree | commitdiff
2007-05-04 amwaterhouseremove system.out tree | commitdiff
2007-05-04 amwaterhouseadded tree | commitdiff
2007-05-04 amwaterhouseAdd dbrefs before zero length features tree | commitdiff
2007-05-04 amwaterhouseRename AppJMol to AppJmol - also AppJmol works with... tree | commitdiff
2007-05-04 amwaterhouseRenamed to AppJmol tree | commitdiff
2007-05-04 amwaterhouseNew example file for version 2.3 tree | commitdiff
2007-05-04 amwaterhouseSplash screen is not added using normal method, prevent... tree | commitdiff
2007-05-03 amwaterhousepdb id toUpperCase tree | commitdiff
2007-05-03 amwaterhouseoptimize repaints tree | commitdiff
2007-05-03 amwaterhouseremove system.out tree | commitdiff
2007-05-02 amwaterhouseAllow expansion of textarea for many sequence input tree | commitdiff
2007-05-02 amwaterhouseconvert space to gapchar tree | commitdiff
2007-05-02 jprocterundo stackempty error fix, refactored do and undo(... tree | commitdiff
2007-05-02 jprocterrefactored do and undo() method to take array of alignm... tree | commitdiff
2007-05-02 jproctercopy only the sequence associated alignment annotation... tree | commitdiff
2007-05-01 amwaterhouseMultiple views/hidden region/undo out of index bug tree | commitdiff
2007-05-01 amwaterhouseCan specify PDB chain to map sequence to - only used... tree | commitdiff
2007-05-01 jproctersort-by-score works of sequence-annotation, not alignme... tree | commitdiff
2007-05-01 amwaterhouseSave seqset properties tree | commitdiff
2007-04-30 jprocterfixed deadlock tree | commitdiff
2007-04-30 jprocterrebuild sort by scores menu when new annotation is... tree | commitdiff
2007-04-27 amwaterhouseremove excessive painting tree | commitdiff
2007-04-27 amwaterhouseCheck pdbid size >0 tree | commitdiff
2007-04-27 amwaterhouseMove repaint in thread tree | commitdiff
2007-04-27 amwaterhousePut alignmentProperties in scrollpane tree | commitdiff
2007-04-27 amwaterhouseCheck feature group is visible for mouse over features tree | commitdiff
2007-04-27 amwaterhouseremove System.out tree | commitdiff
2007-04-27 jprocternewlines in alignment properties converted to <br> tree | commitdiff
2007-04-27 amwaterhousehide the initial window after selection made tree | commitdiff
2007-04-27 amwaterhouseAnnotation gradient will use direct colours if no graph... tree | commitdiff
2007-04-27 amwaterhousehide annotation colouring options tree | commitdiff
2007-04-27 amwaterhouseDont colour labels tree | commitdiff
2007-04-26 jprocteradded/tested sort by scores menu and added basic extrac... tree | commitdiff
2007-04-26 jprocteruse hasScore method to test presence of score in annota... tree | commitdiff
2007-04-26 amwaterhousecheck for null ss character tree | commitdiff
2007-04-26 amwaterhouseEdit seqs tree | commitdiff
2007-04-26 jproctergroovy support without compile-time dependency. tree | commitdiff
2007-04-25 jproctergetContentPane().add alignmentProperties popup. tree | commitdiff
2007-04-25 amwaterhouseShow scores tree | commitdiff
2007-04-25 amwaterhouseExport annotations with properties tree | commitdiff
2007-04-25 amwaterhouseView Properties tree | commitdiff
2007-04-25 jprocterAlignmentAnnotation: added annotation score attribute... tree | commitdiff
2007-04-23 jprocterfunctions that operate on references to sequences in... tree | commitdiff
2007-04-23 jprocterdistinct methods for getting references to selected... tree | commitdiff
2007-04-23 amwaterhouseDbref fetcher takes sequences, not alignment tree | commitdiff
2007-04-23 amwaterhouseTest out new arrangement tree | commitdiff
2007-04-23 amwaterhouseGet colour from structure added tree | commitdiff
2007-04-23 amwaterhousecheck dispalyChar is not null tree | commitdiff
2007-04-20 jprocterglobal dbref fetch option in web services menu. tree | commitdiff
2007-04-19 jprocterfixed column selection cut/paste and self paste. tree | commitdiff
2007-04-19 amwaterhouseOnly setDropTarget if Desktop is not null tree | commitdiff
2007-04-18 amwaterhousehastext = false tree | commitdiff
2007-04-18 amwaterhousefeatureGroups not null tree | commitdiff
2007-04-18 amwaterhouseQuality does not have text tree | commitdiff
2007-04-18 amwaterhouseAlignment of labels and text tree | commitdiff
2007-04-18 amwaterhousechecks for scrollbar height tree | commitdiff
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