JAL-1517 fix copyright for 2.8.2
[jalview.git] / src / jalview / gui /
2013-06-23 Jim ProcterMerge branch 'bug/JAL-1230' into develop
2013-06-23 Jim ProcterJAL-1230 update alignment state for annotation edits...
2013-06-23 Jim ProcterMerge branch 'develop' into develop_m2_8_1_2
2013-06-23 Jim ProcterMerge branch 'bug/JAL-1230' into Release_2_8_Branch
2013-06-23 Jim ProcterMerge branch 'bug/JAL-1230' into develop
2013-06-23 Jim ProcterMerge commit '72c628b' into develop
2013-06-23 Jim ProcterMerge commit '72c628b' into Release_2_8_Branch
2013-06-22 Jim ProcterMerge branch 'feature/JAL-1330' into develop
2013-06-22 Jim ProcterJAL-1330 pick primary seqeunce data source for authorit...
2013-06-21 Jim ProcterJAL-1230 comment unused code to avoid NPE
2013-06-21 Jim ProcterJAL-1327 TODO
2013-06-21 Jim ProcterJAL-1326 JAL-1327 update all graphline thresholds with...
2013-06-21 Jim ProcterMerge branch 'develop' into develop_m2_8_1_2
2013-06-21 Jim ProcterMerge branch 'JAL-1321_jws2_tooltips' into develop
2013-06-21 Jim ProcterJAL-1127 set option widgets to service defaults only...
2013-06-19 Jim ProcterMerge branch 'develop' into develop_m2_8_1_2
2013-06-19 Jim ProcterMerge branch 'JAL-1321_jws2_tooltips' into develop
2013-06-18 Jim ProcterJAL-1320 preserve option/parameter order with LinkedHashMap
2013-06-18 Jim ProcterJAL-1321 don't show a tooltip for empty strings
2013-06-18 Jim ProcterMerge branch 'develop' into develop_m2_8_1_2
2013-06-17 Jim ProcterMerge branch 'JAL-1312_ambiguity_na' into develop
2013-06-17 Jim ProcterJAL-1312 more helpful error message when translation...
2013-06-13 Jim ProcterMerge branch 'develop' into develop_m2_8_1_2
2013-06-13 Jim ProcterMerge branch 'JAL-1315_headlessEPS' into develop
2013-06-13 Jim Procterfix for JAL-1315
2013-06-07 Jim ProcterMerge branch 'develop' into develop_m2_8_1_2
2013-06-07 Jim ProcterMerge branch '2_8_1_patch_multiharmony' into develop
2013-06-07 Jim Procterfix for JAL-1246
2013-06-07 Jim ProcterJAL-1307 patch to squash number format exceptions when...
2013-06-07 Jim ProcterMerge branch 'develop' into develop_m2_8_1_2
2013-06-07 Jim ProcterMerge branch 'JAL-1161_optimisingAnnotationPanel' into...
2013-05-24 Jim ProcterJAL-1291 reinstate fastPaint flag manipulation to make...
2013-05-24 Jim ProcterJAL-1291 TODO: revised graphGroup model so grouped...
2013-05-24 Jim ProcterJAL-1291 - don't touch the graphics object until after...
2013-05-24 Jim ProcterJAL-1291 conditional output of rendering debugging...
2013-05-24 Jim ProcterJAL-966 paintrefresher should be abstract [ Merge branc...
2013-05-24 Jim ProcterJAL-1161 conditional parameters for controlling clipping
2013-05-24 Jim ProcterJAL-1161 changed signature to allow clipping bounds...
2013-05-24 Jim Procterformatting
2013-05-24 Jim ProcterJAL-1161 only trigger an annotation repaint in unwrappe...
2013-05-24 Jim ProcterJAL-1161 enable fastPaint for nudges from scroll bars...
2013-05-24 Jim ProcterJAL-1161 stick to api
2013-02-14 Jim Procterpatch for bizarre ConcurrentModificationException that...
2013-02-13 Jim ProcterMerge branch 'jims_annotate3d_update' into menard_final...
2013-02-13 jprocterfix merge conflicts for finess on JAL-1140 (introduced...
2013-02-13 jprocterJAL-1216 switch to official release of VARNA 3.9
2013-01-18 jprocterMerge branch 'JAL-1254-hotfix' into develop
2013-01-18 jprocterJAL-1255 don't show 'Right click to add annotations...
2012-12-07 jproctermenu for choosing between 'protein' and 'RNA' mode...
2012-12-07 jproctergui hooks for contrafold and RNAfold services. commente...
2012-12-07 jprocterException signature change (will be overwritten by...
2012-12-07 jprocterremove mentions of non-functional RNAInteraction colour...
2012-12-07 jproctertidy debug messages
2012-12-07 jprocterproxy commit for Anne Menard <menard.annec@gmail.com...
2012-12-04 jprocterJAL-1140 - IO classes should only raise generic IOExcep...
2012-12-04 jprocterJAL-1216 switch to official release of VARNA 3.9
2012-11-17 jprocteropenjdk7 returns null for default value selected format...
2012-11-15 jprocterMerge branch 'develop' into menard
2012-11-09 jprocterconstructor takes settings from any existing feature...
2012-11-08 jprocterJAL-1193 ensure the 'loadedComplete' method gets called...
2012-11-08 jproctertidy imports
2012-10-24 jprocterJAL-1193 call setLoadingFromArchiveFinished(true) for...
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-04 jprocterMerge branch 'develop' into Release_2_8_Branch
2012-10-04 jprocterJAL-1064 JAL-671 make sure all buttons are disabled...
2012-10-03 jprocterformatting
2012-10-03 jprocterformatting
2012-10-03 jprocterJAL-1183 JAL-343 - use dialog queue for JABA warning...
2012-10-02 jprocterJAL-1185 patch NPE - create new group for subtree on...
2012-10-01 jprocterJAL-1130 JAL-1137 messy hardcoding of author list to...
2012-10-01 jprocterJAL-1130 JAL-1139 hardcode preferred height to logo...
2012-10-01 jprocterJAL-1130 more robust loading code and different logos...
2012-10-01 jprocterJAL-1183 dialog thread is only started after the splash...
2012-10-01 jprocterJAL-1111 dialog flickers whilst example file starts...
2012-10-01 jprocterJAL-1184 apparent deadlock when launching jalview on...
2012-10-01 jprocterJAL-1183 showNews adds news discovery and display threa...
2012-10-01 jprocterJAL-1183 dialog queue
2012-09-27 jprocterJAL-1030 patch typo
2012-09-25 jprocterJAL-1031 JAL-1032 if selection is non-null but empty...
2012-09-25 jprocterJAL-1010 write validated value back to text field to...
2012-09-25 jprocterJAL-1173 - trap redraw buffer OOM errors. needs a test...
2012-09-25 jprocterJAL-1173 try to catch OOMs when loading annotation...
2012-09-24 jprocterformatting
2012-09-24 jprocterJAL-958 enable logo display when normalise option selected
2012-09-24 jprocteronly recalc group conservation after last sequence...
2012-09-24 jprocterJAL-516 JAL-759 JAL-1066 group & group colourscheme...
2012-09-24 jprocterJAL-958 JAL-966 refactor group/alignment associated...
2012-09-21 jprocterJAL-1165 allow progress indicators on the web service...
2012-09-21 jprocterJAL-1130 jalview spinning icon for web service dialog
2012-09-21 jprocterJAL-1130 splashscreen logo
2012-09-19 jprocterJAL-1130 new logo in help, splash screen and web servic...
2012-09-19 jprocterJAL-1130 new logo spinner in webservices status window
2012-09-19 jprocterJAL-1130 made SplashScreen able to be a dialog that...
2012-09-19 jprocterJAL-1130 refactored standard hyperlink handler code...
2012-09-19 jprocterJAL-1130 trial view of new logo on splashscreen.
2012-09-06 jprocterJAL-958 flag indicating if visualization settings for...
2012-09-06 jprocterJAL-958 store/recover normalised flag
2012-09-05 jprocterJAL-1136 give pre-existing custom settings a special...
2012-09-05 jprocterJAL-1111 allow news reader window to be moved even...
2012-09-05 jprocterJAL-976 fix AACon name typo in source and GUI
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