javadoc
[jalview.git] / src / jalview / gui /
2010-04-05 jprocterjavadoc
2010-04-05 jprocterExtend XML model for graduated feature colours, group...
2010-04-02 jprocterload and save graduated feature colours in XML
2010-04-02 jprocteravoid occasional null exception
2010-04-02 jprocterbetter truncation mechanism
2010-04-01 jprocterrefactored copy of groupURL mechanism into new Envision...
2010-03-30 jproctergroup autoannotation and consensus display settings
2010-03-30 jprocterbugfix for redraw when AlignPanel partially constructed...
2010-03-26 jprocterFeatureColourI removed
2010-03-26 jproctergui/debug: integrate graduated feature colour editor...
2010-03-26 jproctergroup autocalc annotation update logic (still broken)
2010-03-26 jprocterconsole output to stderr and stdout, and console buffer...
2010-03-26 jprocterprofiles only shown for consensus row
2010-03-26 jprocterfix logic for annotation label popup (still outstanding...
2010-03-26 jprocterenable feature display when feature settings is opened.
2010-03-26 jproctermore efficient group URL generation.
2010-03-22 jprocteronly do scaletofit for annotation labels
2010-03-22 jprocterensure that all bits of annotation panel (slider, annot...
2010-03-22 jprocternote to callers of adjustPanelHeight
2010-03-11 jprocterfiner column label format control and new 'scale label...
2010-02-10 jproctercommented out enfin/envision2 sequence submission URL...
2010-02-10 jprocterallow das fetch to be blocking or non-blocking (bug...
2010-02-10 jprocterprogress bar hashtable entry was not being removed...
2010-02-09 jproctergroupURL link prototype
2010-02-09 jproctergroupURL link preference variables
2010-02-09 jproctertodo
2010-01-28 jproctertodo for bug #0058199
2009-11-06 jprocterproperly import column selection from message
2009-11-06 jprocterpotential null pointer fix
2009-11-06 jprocterbetter formed generic select residue X expression
2009-10-30 jprocterna pdb: highlight any part of a residue, not just the...
2009-10-27 jproctertodo
2009-10-27 jprocterfix null pointer exception in redraw for short sequence...
2009-10-14 jprocterquick fix for nullpointer in column selection when...
2009-10-13 jprocterprototype Java log window and sticky configuration
2009-10-13 jprocterdesktop window scaled to current window geometry, proto...
2009-10-13 jprocteradded preferences for usage stats, questionnaire check...
2009-10-13 jprocteruse Pdb database source for fetching and warn user...
2009-10-13 jproctersafer OOM handling when importing from XML
2009-10-13 jprocterenact on a boolean configuration option, prompting...
2009-10-13 jprocterfix potential race condition
2009-10-05 jprocterimmediately show memory usage
2009-08-21 jprocterrender sequence logo over consensus histogram
2009-08-21 jproctersingle-click highlights, double click selectes th assoc...
2009-08-21 jproctergroup consensus/conservation calculated from start...
2009-08-21 jprocterviewport setting for displaying sequence logos
2009-08-21 jprocterreversed order of addition of group consensus and conse...
2009-08-21 jprocterprototype make groups from selection function and shift...
2009-08-21 jprocterrace condition null pointer bugfix
2009-08-21 jprocterbugfix
2009-08-21 jproctertodo for 2.5
2009-08-21 jprocternull pointer exception bug fix
2009-08-03 jprocterfix feature creation for selected region beyond end...
2009-07-24 jprocterupdate annotation when group state is changed
2009-07-24 jproctercolour by label prototype flag
2009-07-24 jproctercatch null pointer exception in headless context
2009-07-24 jprocterget consensus sequence and set ignore gaps flag for...
2009-07-24 jprocterannotation update method synchronises group annotation
2009-07-24 jprocterheadless warning messages, prototype group annotation...
2009-07-24 jprocterrefactored conservation thread, added showgroupannotati...
2009-07-24 jprocterconservation thread refactored from AlignViewport
2009-06-24 jproctercan use whitespace, comma or semicolon to separate IDs
2009-06-19 jprocterselection handler and sender bugfix
2009-06-19 jproctertodo
2009-06-19 jprocterselections sent when mouse is released (drags on ID...
2009-06-19 jprocterprogress bars (still need to be threaded properly)...
2009-06-19 jproctersmoother scroll-to-position action
2009-06-19 jprocterdrag'n'drop a URL on to an alignment
2009-06-12 jproctermethods for importing anonymous vamsas documents into...
2009-06-12 jprocternullpointer bugfix (possibly not needed - was an error...
2009-06-12 jprocterrecover pdb from jalview-xml in vamsas doc
2009-06-12 jproctersend selection on drag over sequence ids
2009-06-12 jprocterretrieve and init vamsas session from vdoc at URL
2009-06-09 jprocterfix null pointer when new view is created then closed...
2009-06-08 jprocterrefactored public methods for non-interactive import...
2009-06-08 jprocterrefactored for non-interactive import and initiation...
2009-06-08 jproctersequence scores only shown if they vary. shift stops...
2009-06-08 jprocterdebug messages and graceful recovery when structure...
2009-06-08 jprocterbetter thread safety for tooltip. apply gpl development...
2009-06-08 jprocterensure listeners are deregistered when panel is closed...
2009-06-08 jprocterensure listeners are deregistered when panel is closed...
2009-06-08 jprocterapply gpl development license
2009-06-01 jproctermore graduated feature support
2009-06-01 jprocterproperly export graduated colour features
2009-06-01 jprocterprototype function for relabelling treenodes with diffe...
2009-06-01 jprocterbetter tooltip placement in alignment window
2009-03-31 jprocterprototype for store/restore of feature colour gradient...
2009-03-17 jprocterallow configuration of graduated colour
2009-03-17 jprocterquantitative shading of features by GraduatedColor
2009-03-17 jprocterprototype dialog for setting feature display shading...
2009-03-17 jproctersortbytree view setting and action added - setting...
2009-02-24 jprocterbetter tooltip display and placement, cope with linkOnl...
2009-02-24 jprocterdebugging selection message send/receive
2009-02-24 jprocteronly display unique url links (both in label and in...
2009-02-24 jprocterbugfix for occasional nullpointer exceptions when selec...
2009-02-24 jprocterchange method signature to allow caller to test if...
2009-02-06 jprocterupdated jalview reference
2009-02-06 jproctershowUnconserved view and group setting
2009-01-09 jprocterhack to completely disable calculation of consensus...
2009-01-09 jprocterbugfix
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