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JAL-885; Structure conservation row is just added if alignment
[jalview.git] / src / jalview / gui /
2011-08-10 janengelhardtJAL-885; Structure conservation row is just added if... tree | commitdiff
2011-08-09 janengelhardtJAL-891; base-pair logos can now be activated for structure tree | commitdiff
2011-08-08 janengelhardtJAL-891; structure logo is adapted to two char's; Missi... tree | commitdiff
2011-08-08 janengelhardtJAL-891; sequence logos are available on structure... tree | commitdiff
2011-08-04 jprocterJAL-896 - patch to ensure arrows in different direction... tree | commitdiff
2011-08-04 jprocterJAL-883 - refactored and debugged arrow, stem and helix... tree | commitdiff
2011-07-31 janengelhardtJAL-885; StructureConservation row is displayed at... tree | commitdiff
2011-07-29 janengelhardtJAL-885; Implementation of StructureFrequency.java... tree | commitdiff
2011-07-25 janengelhardtsome print statements to test things tree | commitdiff
2011-07-25 janengelhardtJAL-882; VARNA crashed when non-standard gaps where... tree | commitdiff
2011-07-25 janengelhardtJAL-878; Additional structures with a 'GR' tag in Stock... tree | commitdiff
2011-07-25 janengelhardtJAL-842; toy example to insert nucleotides in sequences... tree | commitdiff
2011-07-25 janengelhardtJAL-842; Implement transmitting of Jalview Sequence... tree | commitdiff
2011-07-25 janengelhardtJAL-842: some bugfixes; tree | commitdiff
2011-07-25 janengelhardtJAL-842; Added the TextField to edit structure in VARNA tree | commitdiff
2011-07-25 janengelhardtJAL-842; trimming single structures for single sequence... tree | commitdiff
2011-07-25 janengelhardtJAL-842; Give Varna frames name for window organizer... tree | commitdiff
2011-07-25 janengelhardtVarna external frame bug solved tree | commitdiff
2011-07-25 janengelhardtReorganize the class structure, unfortunately breaks... tree | commitdiff
2011-07-25 janengelhardtclean code tree | commitdiff
2011-07-25 janengelhardtFurther structure accessing feature tree | commitdiff
2011-07-25 janengelhardtChanged location of VARNAv3-8b.jar; small changes tree | commitdiff
2011-07-25 janengelhardtjal-842; sequence transmitting to Varna included tree | commitdiff
2011-07-25 janengelhardtJAL-842, AppVarnaBinding was filled with a minimalistic... tree | commitdiff
2011-07-25 janengelhardtJAL-842, Further creation of VARNA classes (probably... tree | commitdiff
2011-07-25 janengelhardtContainer for VARNA classes are created according to... tree | commitdiff
2011-07-25 janengelhardtJAL-841; Structure trigger token in jalview.io.Alignmen... tree | commitdiff
2011-07-25 janengelhardtStart merging of Laurens Code tree | commitdiff
2011-07-25 janengelhardtNew branch created and author list changed to test... tree | commitdiff
2011-07-22 jproctertodo for JAL-860 - associate multiple sequences with... tree | commitdiff
2011-07-22 jprocterensure propagation of colour change on annotation updat... tree | commitdiff
2011-07-22 jprocterfix NPE when annotation colourgradient is applied tree | commitdiff
2011-07-22 jproctercode style tree | commitdiff
2011-07-22 jprocterdefault parameter for colours in annotation shading... tree | commitdiff
2011-07-21 jprocterretrieve all sequences matching a particular name ... tree | commitdiff
2011-07-10 jprocterprogress when saving state (JAL-870) and hack to trap... tree | commitdiff
2011-07-09 jprocterdocumentation for menu item JAL-860 tree | commitdiff
2011-07-09 jproctermenu item and constructor to open a bunch of structures... tree | commitdiff
2011-07-09 jprocterrefactored from PopupMenu (for JAL-860) tree | commitdiff
2011-07-09 jprocterJAL-868 todo tree | commitdiff
2011-07-08 jprocteropen each query result from an alignment datasource... tree | commitdiff
2011-07-07 jproctercomment re JAL-153 tree | commitdiff
2011-07-05 jprocterRevert "partial patch for JAL-411 - text rendered above... tree | commitdiff
2011-07-05 jprocterpartial patch for JAL-411 - text rendered above features tree | commitdiff
2011-07-04 jprocterjmb isn't created yet, so use another SSM provider tree | commitdiff
2011-06-23 jprocterjmb isn't created yet, so use another SSM provider tree | commitdiff
2011-05-17 jprocterrefactor to allow distinct StructureSelectionManager... tree | commitdiff
2011-05-05 jprocterensure feature renderer settings come from the given... tree | commitdiff
2011-04-25 jprocterJAL-824 - additional methods to allow jmol colouring... tree | commitdiff
2011-04-25 jprocterJAL-824 - patch to schema to allow jmol colouring state... tree | commitdiff
2011-04-25 jproctertoggle of inclusion/exclusion of views for colouring... tree | commitdiff
2011-04-22 jprocterformatting tree | commitdiff
2011-04-22 jprocterremoved useless flag (was always null for button press... tree | commitdiff
2011-04-22 jprocterJAL-823 and JAL-824 - seqColour no longer the default... tree | commitdiff
2011-04-22 jproctercomments re JAL-823 legacy issue tree | commitdiff
2011-04-22 jprocterclarify tooltip tree | commitdiff
2011-04-21 jprocterJAL-641 patch tree | commitdiff
2011-04-21 jprocterpatch for JAL-733 tree | commitdiff
2011-04-21 jprocterpatch for JAL-820 and JAL-821 tree | commitdiff
2011-04-21 jprocterseparated alignment annotation height calculation from... tree | commitdiff
2011-04-21 jproctersave and recover graph height, visibility and row posit... tree | commitdiff
2011-04-19 jprocteravoid race condition when featureRenderer for structure... tree | commitdiff
2011-04-08 jproctertodo tree | commitdiff
2011-02-28 jprocterexcess imports tree | commitdiff
2011-02-25 jprocterfirst approximation for JAL-782 - hint that opaque... tree | commitdiff
2011-02-18 jprocterJAL-777/JAL-641 debugging tree | commitdiff
2011-02-18 jprocternew alignmentPanel api + JAL-777/JAL-641 debugging tree | commitdiff
2011-02-18 jprocterJAL-574 tree | commitdiff
2011-02-18 jprocterconvenience method to discover all Jmols tree | commitdiff
2011-02-18 jprocterJAL-779 and some redraw refinements tree | commitdiff
2011-02-18 jprocterJAl-574 tree | commitdiff
2011-02-18 jprocteravoid exceptions for orphaned windows tree | commitdiff
2011-02-18 jprocterbugfixing for JAL-778 tree | commitdiff
2011-02-18 jprocterdynamic alignmentPanel menu class tree | commitdiff
2011-02-15 jprocterfix for JAL-776 tree | commitdiff
2011-02-04 jprocterjavadoc tree | commitdiff
2011-01-21 jproctermore efficient highlighting and selection display tree | commitdiff
2011-01-21 jprocterlogic bug for auto scrolling tree | commitdiff
2011-01-21 jprocterrelaxed ID matching parameter JAL-753 and sortBy JAL-754 tree | commitdiff
2011-01-18 jprocterpatch for JAL-695 tree | commitdiff
2011-01-18 jprocterrefactored VamsasListener to allow the source of the... tree | commitdiff
2011-01-12 jprocterselection should be sent after refresh happens tree | commitdiff
2011-01-10 jprocterpatch for JAL-740 tree | commitdiff
2011-01-07 jprocterbulk associate pdb files dropped on to alignment :... tree | commitdiff
2011-01-07 jprocterrefactored guts of pdb file association code tree | commitdiff
2011-01-05 jprocterexception reporting for bad URLs tree | commitdiff
2010-12-17 jprocterfirst publicly accessible test of JAL-724 tree | commitdiff
2010-12-14 jprocterrender of html job logs and link opening JAL-720 tree | commitdiff
2010-12-14 jprocterJAL-725 - show progress when opening URL in browser tree | commitdiff
2010-12-14 jprocterrefactored and patched for JAL-721 tree | commitdiff
2010-12-09 jprocterrefactored and added methods for getting richer Alignme... tree | commitdiff
2010-11-14 jprocterflag indicating if results should be associated immediately tree | commitdiff
2010-11-12 jprocterpatch for JAL-682 - copy over current display settings... tree | commitdiff
2010-11-12 jprocterpatch for JAL-699 so conservation/consensus threads... tree | commitdiff
2010-11-12 jprocterrevised logic to avoid NPE tree | commitdiff
2010-11-11 jprocterpotential non-threadsafe condition tree | commitdiff
2010-11-11 jprocterpatch for JAL-655 tree | commitdiff
2010-11-04 jproctermade ws warning dialog optional, and fixed its wording... tree | commitdiff
2010-11-04 jprocterreport any problematic web service URLs ( JAL-343 ) tree | commitdiff
2010-11-04 jprocterremove name of progress bar when stopping ws refresh... tree | commitdiff
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