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added (and enabled) switch to store gff source string as sequencefeature.group rather...
[jalview.git] / src / jalview / gui /
2008-12-15 jprocterwarning for failed parsing of newick strings tree | commitdiff
2008-12-15 jprocternew callback handler allowing threads that request... tree | commitdiff
2008-12-08 jprocterdisplay feature score in tooltip tree | commitdiff
2008-12-08 jprocterexperimental buttons for sort on score/density and... tree | commitdiff
2008-12-05 jproctersupport for multiple accession retrieval from a databas... tree | commitdiff
2008-12-04 jprocterfetch database references for all EBI db + selected... tree | commitdiff
2008-12-04 jprocterdas source browser uses local source method from jalvie... tree | commitdiff
2008-11-12 jprocterselection sending and receiving, autoscrolling to highl... tree | commitdiff
2008-11-12 jprocterselection sending and receiving, autoscrolling to highl... tree | commitdiff
2008-11-12 jprocterselection sending tree | commitdiff
2008-11-12 jprocternew ID constructor and selection sending tree | commitdiff
2008-11-12 jprocternew constructors for setting IDs tree | commitdiff
2008-11-12 jprocternew window discovery and alignment view navigation... tree | commitdiff
2008-11-12 jprocterjar inputstream provider enabling multiple jar entries... tree | commitdiff
2008-09-09 jproctershow non-positional features with same code as positona... tree | commitdiff
2008-09-09 jprocterrefactored feature tooltip generation code to static... tree | commitdiff
2008-09-09 jprocternon-positional features are displayed with additional... tree | commitdiff
2008-09-09 jproctermake URL links from description string when link is... tree | commitdiff
2008-09-08 jprocterview settings in view submenu and user preferences... tree | commitdiff
2008-09-08 jprocterintroduced and commented out code for generating URLs... tree | commitdiff
2008-09-04 jproctermerge from 2_4_Release branch tree | commitdiff
2008-08-26 jprocterset title of viewer frame after file has been loaded... tree | commitdiff
2008-08-26 jprocterfuture bug fix todo tree | commitdiff
2008-08-26 jprocternew thread for initting of DBRefFetcher with latest... tree | commitdiff
2008-08-26 jprocteradded singleton access method to retrieve the latest... tree | commitdiff
2008-08-26 jproctertooltip for fetch db refs and more generic regex for... tree | commitdiff
2008-08-20 jproctertooltip displays formatted annotation row description... tree | commitdiff
2008-08-19 jprocterbeginning of fix for embl/cds/highlighting IO in https... tree | commitdiff
2008-08-19 jprocterfix for arrayoutofbounds bug when secondary structure... tree | commitdiff
2008-08-19 jprocterregex links for launching URL from single click on... tree | commitdiff
2008-08-15 jprocterupdate text and version checker tree | commitdiff
2008-08-15 jprocterdialog size on macs tree | commitdiff
2008-08-15 jproctercheck for crossreferences every time the menus are... tree | commitdiff
2008-08-15 jproctercatch invalid URL link exception properly tree | commitdiff
2008-08-15 jprocterincrease height of dialog tree | commitdiff
2008-08-15 jprocterallow '|' in regex for URL links to be recovered from... tree | commitdiff
2008-08-13 jproctercheck for null viewport on dataset recovery tree | commitdiff
2008-08-13 jprocterensure input data can be recovered for tree and PCA... tree | commitdiff
2008-08-13 jprocterdo not try to cancel jobs that cannot be cancelled tree | commitdiff
2008-08-11 jprocterregular expression based URL link generation tree | commitdiff
2008-08-06 jproctergeneration of additional URLs for DBRefs on a sequence... tree | commitdiff
2008-08-05 jprocternew vamsas session does not open a dialog box tree | commitdiff
2008-08-05 jprocterensure das sequence sources are refreshed when das... tree | commitdiff
2008-08-04 jprocterpfam seed and full alignment retrieval and nicer orderi... tree | commitdiff
2008-08-01 jprocternew SequenceFetcher gui and visual delay indication... tree | commitdiff
2008-08-01 jprocterinterface for windows that display progress bars tree | commitdiff
2008-07-31 jprocteruse canonical DbSource name in GUI box, and ensure... tree | commitdiff
2008-07-18 jprocterSequence label colour stored for each sequence group tree | commitdiff
2008-06-30 jprocterjavadoc and constraint to ensure annotation labels... tree | commitdiff
2008-05-12 jprocterfixed Jalview project archive bug where alignment view... tree | commitdiff
2008-04-29 jproctercomments and version wget ping timeout fix for when... tree | commitdiff
2008-04-29 jprocteradded SeqSearch service interface. Documented and refac... tree | commitdiff
2008-04-25 jprocterpotential fix for hang on opening of application window... tree | commitdiff
2008-04-21 jprocteradded centre annotation labels menu entry (and commente... tree | commitdiff
2008-04-17 jproctertodo for refactoring webservice GUI creation mechanism tree | commitdiff
2008-02-22 jproctersequenceId is a string, not an integer - allows generat... tree | commitdiff
2008-02-22 jprocterprobably unnecessary optimisation (SequenceGroup.addSeq... tree | commitdiff
2008-02-22 jprocterOn 'save' menu entry check to see if fileformat is... tree | commitdiff
2008-01-29 jprocterflag to indicate if errors are raised as warning dialog... tree | commitdiff
2008-01-29 jprocterexplicitly allow access to showMemoryUsage flag in... tree | commitdiff
2008-01-29 jprocterjavadoc tree | commitdiff
2008-01-21 jprocterjavadoc tree | commitdiff
2008-01-11 jproctermemory monitor, garbage collection and changed menu... tree | commitdiff
2007-12-21 jproctersequence db fetcher metadata for multiple sequence... tree | commitdiff
2007-12-18 jprocterincorrect colour-by-sequence when gaps are present... tree | commitdiff
2007-11-28 jprocterbugfix tree | commitdiff
2007-11-24 jprocteronly show bootstrap values if they are valid! tree | commitdiff
2007-11-16 jprocterrefactored ebi soap client and AbstractSequenceFetcher... tree | commitdiff
2007-11-16 jproctertodo for sortbyPID operating on current selection rathe... tree | commitdiff
2007-11-12 jprocteradded mechanism to initiate DAS feature fetching progra... tree | commitdiff
2007-11-12 jprocterpublic access to static getAlignFrames method. tree | commitdiff
2007-11-12 jprocterpublic method to indicate if there are progress bars... tree | commitdiff
2007-11-12 jprocterpublicly accessible flag to indicate if a registry... tree | commitdiff
2007-11-12 jprocterbugfix for occasional race condition causing exception... tree | commitdiff
2007-11-12 jproctercomments tree | commitdiff
2007-11-07 jprocterfix accidental breakage of annotation panel redraw... tree | commitdiff
2007-11-07 jprocterattempt to make fastPaint method thread safe tree | commitdiff
2007-11-05 jproctervamsas connects and updates are threaded with a progres... tree | commitdiff
2007-10-31 jprocterrejiggered loadDataFile and parseFeatureFile so JNet... tree | commitdiff
2007-10-31 jprocteradded bugfix todo tree | commitdiff
2007-10-31 jprocterintroduce new type to pass around featureRendererSettings tree | commitdiff
2007-10-31 jprocternullpointer bug fix on consensus thread tree | commitdiff
2007-10-31 jprocterjavadoc on webservice discovery method tree | commitdiff
2007-10-26 jprocteruse new utility class for platform info tree | commitdiff
2007-10-26 jprocterupdated client which allows XML validation flags to... tree | commitdiff
2007-10-24 jprocterthread for product retrieval tree | commitdiff
2007-10-04 jprocterselected region output also supports generation of... tree | commitdiff
2007-10-04 jprocterrefactored list of file extensions and file format... tree | commitdiff
2007-10-04 jprocteredit label/displayChar contains existing character... tree | commitdiff
2007-10-04 jprocterrefactored invertColumnSelection as an object method tree | commitdiff
2007-10-02 jprocteradded colSel as a parameter formatAdaptor print functio... tree | commitdiff
2007-09-25 jprocteradded store of undo/redo hash for each alignment so... tree | commitdiff
2007-09-25 jprocterprimitive methods for getting current undo/redo state... tree | commitdiff
2007-09-14 jprocteradded support for loading a vamsas document into a... tree | commitdiff
2007-09-10 jprocterchoose a particular vamsas session, load, or create... tree | commitdiff
2007-09-07 jprocteradded action for saving the current session as a vamsas... tree | commitdiff
2007-09-06 jprocterfixes bootstrap bug noted by Chunlong Chen in email... tree | commitdiff
2007-08-31 jprocteradded CSV export of annotation rows to application. tree | commitdiff
2007-08-30 jprocter*really* make sure database references are stored and... tree | commitdiff
2007-08-30 jprocterensure codon mappings and database references are merge... tree | commitdiff
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