javadoc
[jalview.git] / src / jalview / gui /
2012-05-04 jprocterJAL-1065 JAL-1066 - refactored tcoffee score-> jalview...
2012-05-04 jprocterJAL-1065 JAL-1066 generic 'annotation collection update...
2012-05-04 jprocterJAL-1065 JAL-1066 - use direct object reference rather...
2012-04-10 jprocterMerge branch 'Tcoffee_JAL-1065' of https://source.jalvi...
2012-04-09 Paolo Di TommasoJAL-1065 - Visualize T-Coffee quality scores for an...
2012-02-12 Jim Procter(JAL-1022) reverted to original strategy of escaping...
2012-02-12 Jim Procter(JAL-1050) ensure all filenames passed in to the load...
2012-02-12 Jim Procter(JAL-1025 JAL-1022) File based equivalence used to...
2012-02-12 Jim Procter(JAL-1049) only store state reference for sequence...
2012-02-12 Jim ProcterJAL-1025 JAL-1022 use File based equivalence to map...
2012-02-12 Jim ProcterJAL-715 - remove platform dependent includes
2011-12-08 jprocter(JAL-1023) ensure filename is properly escaped before...
2011-12-08 jprocterremove commented lines
2011-11-21 jprocter(JAL-368) ensure window never gets a negative Y coordin...
2011-11-20 jprocter(JAL-1004) add mouse listener to internal panel
2011-11-09 jprocter(JAL-986) rendering to imageMap counts as rendering...
2011-11-09 jprocter(JAL-985,JAL-986) documentation and tooltips
2011-11-09 jprocter(JAL-985,JAL-986) allow different ID margin calculation...
2011-11-09 jprocter(JAL-985,JAL-986) preference widgets for settings
2011-11-04 jprocter(JAL-980) update binding for refactored Jmol constants...
2011-09-27 jproctersame overzeaolous logic (JAL-915)
2011-09-27 jprocterapply version 2.7 copyright
2011-09-26 jproctertweaked dialog layout. should consider refactoring
2011-09-26 jproctermake news window a modal dialog on the jalview desktop...
2011-09-26 jprocteravoid deprecation and ensure dialog close event is...
2011-09-25 jprocterorganise imports
2011-09-25 jproctermore focus fixing (JAL-943)
2011-09-25 jprocterfix logic to ensure first check for news is correct...
2011-09-23 jproctertry even harder to get focus - for benefit of windows...
2011-09-23 jprocterensure blog window gets put to front after dialogs...
2011-09-22 jprocterrefactor and remove excess imports (JAL-943)
2011-09-22 jprocterjalview rss reader based on jswingreader (JAL-943)
2011-09-16 jprocterJAL-747 - made warning message friendlier and more...
2011-09-16 jprocterJAL-574 added option to enable/disable 'follow selectio...
2011-09-16 jprocterJAL-940 - removed legacy service options from preferenc...
2011-09-16 jprocterJAL-468 JAL-936 sort alignment by tree and autosort...
2011-09-15 jprocterJAL-860 fixed grammar for one structure vs many structu...
2011-09-15 jprocterJAL-854 tweaked menu layout so services appear before...
2011-09-14 jprocterJAL-934 - refactor to use label font functions
2011-09-14 jprocterJAL-934 - refactor to use label font functions
2011-09-14 jprocterJAL-934 - standard label font functions
2011-09-14 jprocterpatch for NPE (not clear if NPE is evidence of deeper...
2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations...
2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations...
2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations...
2011-08-30 jprocterJAL-915 - ensured that exceptions are not raised in...
2011-08-30 jprocterJAL-715 rsbs service editing
2011-08-30 jprocterJAL-715 JalviewDialog for RSBS service editing pane
2011-08-29 jprocterJAL-919, JAL-715 - prototype service editing dialog...
2011-08-29 jprocterJAL-633, JAL-591 - refactored ArgumentI.getValue from...
2011-08-29 jprocterrefactored popup dialog boilerplate code to own class
2011-08-25 jprocterconstructor only needs GUI container interface
2011-08-25 jprocterJAL-591 - refactored web service parameter dialog to...
2011-08-25 jprocterdebug dialog
2011-08-24 jprocterJAL-715 dialog for interactively editing a new or exist...
2011-08-24 jprocterrefactor labelled button creator to JvSwingUtils
2011-08-18 jprocterremove debug message
2011-08-18 jprocterfix for JAL-701 - ensure '<' appears in tooltip in...
2011-08-18 jprocterminor efficiency refactor
2011-08-17 jprocterJAL-853 use service action attribute to index services...
2011-08-17 jprocterremove any trailing '/' from the URL before validation...
2011-08-17 jprocteravoid NPE race condition when several threads waiting...
2011-08-17 jprocterfix for JAL-888
2011-08-17 jprocterfix for JAL-888
2011-08-17 jprocterJAL-867 - rejigged layout to a single splitpane wide...
2011-08-15 jprocterJAL-747 - warning dialog if Jalview can't resolve filen...
2011-08-05 jprocterallow several progress bars on the desktop window ...
2011-07-28 jprocterrefer to local default setting for proxy when connecting to
2011-07-25 jprocteruse proper encoding for storing colour as user preferen...
2011-07-22 jproctertodo for JAL-860 - associate multiple sequences with...
2011-07-22 jprocterensure propagation of colour change on annotation updat...
2011-07-22 jprocterfix NPE when annotation colourgradient is applied
2011-07-22 jproctercode style
2011-07-22 jprocterdefault parameter for colours in annotation shading...
2011-07-21 jprocterretrieve all sequences matching a particular name ...
2011-07-10 jprocterprogress when saving state (JAL-870) and hack to trap...
2011-07-09 jprocterdocumentation for menu item JAL-860
2011-07-09 jproctermenu item and constructor to open a bunch of structures...
2011-07-09 jprocterrefactored from PopupMenu (for JAL-860)
2011-07-09 jprocterJAL-868 todo
2011-07-08 jprocteropen each query result from an alignment datasource...
2011-07-07 jproctercomment re JAL-153
2011-07-05 jprocterRevert "partial patch for JAL-411 - text rendered above...
2011-07-05 jprocterpartial patch for JAL-411 - text rendered above features
2011-07-04 jprocterjmb isn't created yet, so use another SSM provider
2011-06-23 jprocterjmb isn't created yet, so use another SSM provider
2011-05-17 jprocterrefactor to allow distinct StructureSelectionManager...
2011-05-05 jprocterensure feature renderer settings come from the given...
2011-04-25 jprocterJAL-824 - additional methods to allow jmol colouring...
2011-04-25 jprocterJAL-824 - patch to schema to allow jmol colouring state...
2011-04-25 jproctertoggle of inclusion/exclusion of views for colouring...
2011-04-22 jprocterformatting
2011-04-22 jprocterremoved useless flag (was always null for button press...
2011-04-22 jprocterJAL-823 and JAL-824 - seqColour no longer the default...
2011-04-22 jproctercomments re JAL-823 legacy issue
2011-04-22 jprocterclarify tooltip
2011-04-21 jprocterJAL-641 patch
2011-04-21 jprocterpatch for JAL-733
2011-04-21 jprocterpatch for JAL-820 and JAL-821
2011-04-21 jprocterseparated alignment annotation height calculation from...
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