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JAL-2717 JAL-2668 fixes to HMMER colour scheme display names, enabled state, test...
[jalview.git]
/
src
/
jalview
/
hmmer
/
HMMBuildThread.java
2018-02-27
gmungoc
JAL-2717 JAL-2668 fixes to HMMER colour scheme display...
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2018-02-22
gmungoc
JAL-2629 tidy tests, refactor hmmer node mapping slightly
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2018-02-21
gmungoc
JAL-2629 simplifying method signatures in Hmmer command...
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2018-02-20
gmungoc
JAL-2629 removed SequenceI.get/setLastPosition and...
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2018-02-19
gmungoc
JAL-2629 partial refactoring of Hmmer command classes
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2018-02-19
gmungoc
JAL-2629 formatting only
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2017-09-01
TZVanaalten
JAL-2629 fix hmmbuild failing due to RF longer than...
features/hmmer
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2017-09-01
TZVanaalten
JAL-2629 manual curation of HMMs via reference annotati...
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2017-08-30
TZVanaalten
JAL-2629 fix issue where HMM sequence would be longer...
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2017-08-30
TZVanaalten
JAL-2629 for multi-job hmmbuilds, group names are now...
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2017-08-28
TZVanaalten
JAL-2629 HMMER alignment background colour scheme is...
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2017-08-25
TZVanaalten
JAL-2629 hmmbuild runs on the alignment by default
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2017-08-25
TZVanaalten
JAL-2629 fix for hmmbuild failing due to whitespace...
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2017-08-25
TZVanaalten
Revert "jal-2629 fix for hmmbuild failing due to whites...
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2017-08-25
TZVanaalten
jal-2629 fix for hmmbuild failing due to whitespace...
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2017-08-25
TZVanaalten
JAL-2629 add multiple options for running hmmbuild...
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2017-08-25
TZVanaalten
JAL-2629 add adjustable parameters to hmmbuild
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2017-08-25
TZVanaalten
JAL-2629 add basic parameter adjustment to hmmsearch...
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2017-08-18
TZVanaalten
JAL-2668 HMMFile export method moved to print method
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2017-08-17
TZVanaalten
JAL-2629 add documentation to previous work
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2017-08-16
TZVanaalten
JAL-2629 fix for hmmbuild not loading a HMM onto the...
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2017-08-16
TZVanaalten
JAL-2629 add hmmbuild validation check which also gets...
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2017-08-15
TZVanaalten
JAL-2629 prevent hmmbuild from running if there are...
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2017-08-15
TZVanaalten
JAL-2629 add checks for executing hmmer commands as...
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2017-08-15
tzvanaalten
JAL-2629 fix file loading issues on Mac
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2017-08-15
TZVanaalten
JAL-2629 exported HMMs are now named correctly
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2017-08-15
TZVanaalten
JAL-2629 fix uniquified sequence names appearing when...
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2017-08-14
TZVanaalten
JAL-2629 fix expected length error for hmmbuild by...
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2017-08-14
TZVanaalten
JAL-2629 add validation for HMMER path
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2017-08-13
TZVanaalten
JAL-2629 add force alphabet type for HMMER commands
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2017-08-11
TZVanaalten
JAL-2629 add ability to build a HMM from a group
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2017-08-10
TZVanaalten
JAL-2629 hmmalign now correctly creates a new frame
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2017-08-10
tzvanaalten
JAL-2629 fix files permission issue on Mac
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2017-08-09
TZVanaalten
JAL-2629 buffers are now temporary files
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2017-08-08
TZVanaalten
JAL-2629 add ability to select hmmer binaries folder
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2017-08-07
TZVanaalten
JAL-2629 fixed hmmalign failing due to differing sequen...
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2017-08-07
TZVanaalten
JAL-2629 current hmmer commands are now executed in...
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git://source.jalview.org / jalview.git / history