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JAL-3066 Fix NullPointerException thrown when showing HMMER run dialog
[jalview.git]
/
src
/
jalview
/
io
/
HMMFile.java
2020-05-18
Jim Procter
Merge branch 'alpha/JAL-3362_Jalview_212_alpha' into...
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2018-04-23
gmungoc
JAL-2956 save/restore HMMER profile to/from Jalview...
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2018-03-30
gmungoc
JAL-2599 MapList from HMM nodes to consensus dataset...
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2018-02-26
gmungoc
JAL-2599 test coverage and bug fixes for 'minimal file...
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2018-02-23
gmungoc
JAL-2599 parser and datamodel use primitive double...
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2018-02-22
gmungoc
JAL-2629 tidy tests, refactor hmmer node mapping slightly
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2018-02-22
gmungoc
JAL-2629 tidy unit tests, constants etc
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2017-09-01
TZVanaalten
JAL-2629 fix hmmbuild failing due to RF longer than...
features/hmmer
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2017-08-18
TZVanaalten
Merge branch 'develop' into features/hmmer
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2017-08-18
TZVanaalten
JAL-2668 HMMFile export method moved to print method
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2017-08-17
TZVanaalten
JAL-2599 move fillSymbol method to HMFile
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2017-08-17
TZVanaalten
JAL-2599 some slight renaming of variables and methods
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2017-08-17
TZVanaalten
JAL-2629 add documentation to previous work
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2017-08-16
TZVanaalten
JAL-2629 add hmmbuild validation check which also gets...
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2017-08-11
TZVanaalten
JAL-2599 HMMs can now be dropped onto the desktop
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2017-08-10
tzvanaalten
JAL-2629 fix files permission issue on Mac
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2017-08-08
TZVanaalten
JAL-2599 fix for index issue on node lookup
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2017-08-07
TZVanaalten
JAL-2629 current hmmer commands are now executed in...
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2017-08-02
TZVanaalten
JAL-2599 fix issue where parser exported map annotation...
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2017-07-31
TZVanaalten
JAL-2629 add hmmalign command
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2017-07-27
TZVanaalten
JAL-2629 implement hmmbuild
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2017-07-24
tzvanaalten
JAL-2599 .hmm parser should now accept older .hmm files
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2017-07-20
TZVanaalten
JAL-2599 add ability to process RNA HMMer files
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2017-07-18
TZVanaalten
JAL-2599 complete documentation for HMM and HMMFile...
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2017-07-18
TZVanaalten
JAL-2599 modified state transition probability storage
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2017-06-29
TZVanaalten
transferred the storage position of the HMM to annotations
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2017-06-22
TZVanaalten
fully integrate HMMER3 file format into Jalview
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2017-06-20
TZVanaalten
restructure file exporter
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2017-06-15
TZVanaalten
add HMMFile class to read and write HMM files
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