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[jalview.git] / src / jalview / io / HMMFile.java

2017-08-11	TZVanaalten	JAL-2599 HMMs can now be dropped onto the desktop	blob \| commitdiff
2017-08-10	tzvanaalten	JAL-2629 fix files permission issue on Mac	blob \| commitdiff \| diff to current
2017-08-08	TZVanaalten	JAL-2599 fix for index issue on node lookup	blob \| commitdiff \| diff to current
2017-08-07	TZVanaalten	JAL-2629 current hmmer commands are now executed in...	blob \| commitdiff \| diff to current
2017-08-02	TZVanaalten	JAL-2599 fix issue where parser exported map annotation...	blob \| commitdiff \| diff to current
2017-07-31	TZVanaalten	JAL-2629 add hmmalign command	blob \| commitdiff \| diff to current
2017-07-27	TZVanaalten	JAL-2629 implement hmmbuild	blob \| commitdiff \| diff to current
2017-07-24	tzvanaalten	JAL-2599 .hmm parser should now accept older .hmm files	blob \| commitdiff \| diff to current
2017-07-20	TZVanaalten	JAL-2599 add ability to process RNA HMMer files	blob \| commitdiff \| diff to current
2017-07-18	TZVanaalten	JAL-2599 complete documentation for HMM and HMMFile...	blob \| commitdiff \| diff to current
2017-07-18	TZVanaalten	JAL-2599 modified state transition probability storage	blob \| commitdiff \| diff to current
2017-06-29	TZVanaalten	transferred the storage position of the HMM to annotations	blob \| commitdiff \| diff to current
2017-06-22	TZVanaalten	fully integrate HMMER3 file format into Jalview	blob \| commitdiff \| diff to current
2017-06-20	TZVanaalten	restructure file exporter	blob \| commitdiff \| diff to current
2017-06-15	TZVanaalten	add HMMFile class to read and write HMM files	blob \| commitdiff \| diff to current

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