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Jalview-JS/JAL-3253-applet update for core_jalview
[jalview.git]
/
src
/
jalview
/
io
/
2019-05-17
hansonr
Jalview-JS/JAL-3253-applet additional static final...
tree
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commitdiff
2019-05-17
hansonr
Jalview-JS/JAL-3253-applet adding more applet parameter...
tree
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commitdiff
2019-05-15
gmungoc
JAL-3253-applet feature parameter processing fixed
tree
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commitdiff
2019-05-15
gmungoc
JAL-3253 ApplicationSingletonProvider replaces Instance
tree
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commitdiff
2019-05-14
hansonr
JAL-3263, JAL 3264 New Transpiler fixes FunctionalInter...
tree
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commitdiff
2019-05-13
hansonr
better preferences/properties
tree
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commitdiff
2019-05-10
hansonr
minor edits
tree
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commitdiff
2019-05-10
hansonr
JAL-3253 FileFormats static removal
tree
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commitdiff
2019-05-10
hansonr
JAL-3253 jalview.bin.Instance for AppCache and FeatureA...
tree
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commitdiff
2019-05-10
hansonr
JAL-3253 jalview.bin.Instance streamlining
tree
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commitdiff
2019-05-10
hansonr
JAL-3253 jalview.bin.Instance handles all singleton...
tree
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commitdiff
2019-05-09
hansonr
JAL-3253/JAL-3258 FileLoader fix for use of file.separator
tree
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commitdiff
2019-05-09
hansonr
JAL-3253/JAL-3257
tree
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commitdiff
2019-05-09
hansonr
JAL-3253 preliminary static fixes for JavaScript part...
tree
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commitdiff
2019-05-08
hansonr
JAL-3253 preliminary static fixes for JavaScript
tree
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commitdiff
2019-04-18
hansonr
explicit Hashtable objects
tree
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commitdiff
2019-04-17
gmungoc
JAL-3026 fix bug loading Jalview Project (in Java)
tree
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commitdiff
2019-04-04
gmungoc
JAL-3220 j2sIgnore on 3 more main methods
tree
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commitdiff
2019-04-04
gmungoc
JAL-3220 j2sIgnore on main methods on test / utility...
tree
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commitdiff
2019-04-03
hansonr
replacing @j2sNative with @j2sIgnore where appropriate...
tree
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commitdiff
2019-04-03
hansonr
j2sNative clean-up. Fixes problem with second try of...
tree
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commitdiff
2019-03-27
hansonr
consolidation of Platform isJS calls
tree
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commitdiff
2019-03-27
hansonr
isJS cleanup
tree
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commitdiff
2019-03-27
hansonr
clean-up of isJS business for (temporarily) noneditable...
tree
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commitdiff
2019-03-14
gmungoc
JAL-3210 JAL-3141 JAL-3056 disable backups in JalviewJS
tree
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commitdiff
2019-03-13
gmungoc
JAL-3210 merge conflict tidying
tree
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commitdiff
2019-03-13
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2019-03-11
gmungoc
Merge branch 'feature/JAL-3127_seqidChainshading' into...
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'bug/JAL-2791exportFilteredFeature' into...
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'feature/JAL-3093wrappedModeTooltips'...
tree
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commitdiff
2019-02-28
gmungoc
Merge branch 'feature/JAL-3169cancelOverwrite' into...
tree
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commitdiff
2019-02-28
gmungoc
Merge remote-tracking branch 'origin/feature/JAL-3141_b...
tree
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commitdiff
2019-02-28
Jim Procter
Merge branch 'feature/JAL-3141_backupfiles_for211'...
merge/develop_feature/JAL-3141_backupfiles_for211
tree
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commitdiff
2019-02-22
gmungoc
JAL-2738 don't set AF as feature score
tree
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commitdiff
2019-02-22
Ben Soares
JAL-3141 improved message for asking whether to delete...
tree
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commitdiff
2019-02-21
Ben Soares
JAL-3141 Sensible refactoring for confirming deleting...
tree
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commitdiff
2019-02-17
Ben Soares
JAL-3141 User warning when deleting old backup files...
tree
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commitdiff
2019-02-15
Ben Soares
JAL-3141 re-order deletion of old files and check lastM...
tree
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commitdiff
2019-02-14
Ben Soares
JAL-3141 Added warning/confirmation when suffixReverse...
tree
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commitdiff
2019-02-04
hansonr
SequenceFetcher JvCacheableInputBox isJS test
tree
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commitdiff
2019-02-04
hansonr
refactoring for DBMODList
tree
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commitdiff
2019-02-04
hansonr
adds protype size to JTextArea hack for nonexistent...
tree
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commitdiff
2019-02-04
hansonr
fixing array processing order
tree
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commitdiff
2019-02-01
Ben Soares
JAL-3141 Slight efficiency gain in detecting backupfile...
tree
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commitdiff
2019-01-30
Ben Soares
JAL-3141 Enabled the 'Include backpup files' checkbox...
tree
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commitdiff
2019-01-29
hansonr
JSON writing fix, JColorChooser (mnemonic change) fix
tree
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commitdiff
2019-01-29
Ben Soares
JAL-3141 Found a good fix for updating the FileChooser...
tree
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commitdiff
2019-01-29
Ben Soares
JAL-3141 Found a (not ideal) fix for updating the FileC...
tree
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commitdiff
2019-01-28
Ben Soares
JAL-3141 improvement on BackupFilenameParts filename...
tree
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commitdiff
2019-01-26
hansonr
Jalview.isJS() --> Platform.isJS(), DBRefEntry[] -...
tree
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commitdiff
2019-01-25
Ben Soares
JAL-3141. This adds quite a lot of code to allow an...
tree
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commitdiff
2019-01-25
hansonr
JSON refactoring
tree
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commitdiff
2019-01-24
Ben Soares
JAL-3141 New layout and wording of Backups Preferences...
tree
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commitdiff
2019-01-24
Ben Soares
JAL-3141 Reformatted code in eclipse
tree
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commitdiff
2019-01-23
Ben Soares
JAL-3141 Added Presets options in the Backups Preferenc...
tree
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commitdiff
2019-01-22
Ben Soares
JAL-3141 Fixed what happens when suffix template has...
tree
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commitdiff
2019-01-21
hansonr
isAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA...
tree
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commitdiff
2019-01-20
Ben Soares
JAL-3141 removing diagnostic output
tree
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commitdiff
2019-01-20
Ben Soares
JAL-3141 Changed suffix position to after the extension...
tree
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commitdiff
2019-01-18
Jim Procter
Merge branch 'feature/JAL-3063jaxbNoCastor' into featur...
tree
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commitdiff
2019-01-14
Ben Soares
JAL-3141 Made more constants
tree
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commitdiff
2019-01-09
Ben Soares
JAL-3141 removed redundant method to tests
tree
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commitdiff
2019-01-09
Ben Soares
JAL-3141 forgot to add this file after extracting the...
tree
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commitdiff
2019-01-09
Ben Soares
JAL-3141 Made one more suggested change from code review
tree
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commitdiff
2019-01-08
Ben Soares
JAL-3141 Made some more suggested changes from code...
tree
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commitdiff
2019-01-08
Ben Soares
JAL-3141 Made some suggested changes from code review
tree
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commitdiff
2018-12-21
gmungoc
JAL-3032 prefer Jalview.isJS() to j2sNative
tree
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commitdiff
2018-12-20
hansonr
JalviewFileChooser back to original; synth. ref fixed...
tree
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commitdiff
2018-12-20
hansonr
preliminary hack fix for synthetic reference issue
tree
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commitdiff
2018-12-19
gmungoc
JAL-3178 include non-positional features in their group...
bug/JAL-2791exportFilteredFeature
tree
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commitdiff
2018-12-18
gmungoc
JAL-3048 fix NPE in file chooser callbacks map
tree
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commitdiff
2018-12-18
gmungoc
JAL-3048 DialogRunnerI reduced to minimal implementation
tree
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commitdiff
2018-12-17
gmungoc
Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into
tree
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commitdiff
2018-12-17
gmungoc
Merge branch 'feature/JAL-3169cancelOverwrite' into...
tree
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commitdiff
2018-12-17
gmungoc
JAL-3068 tidy status bar messaging
tree
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commitdiff
2018-12-17
gmungoc
Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into
tree
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commitdiff
2018-12-13
hansonr
SwingJS 3.2.4.05 should fix JFileChooser synthetic...
tree
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commitdiff
2018-12-10
gmungoc
JAL-3048 wip externalise trigger from RunResponse
tree
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commitdiff
2018-12-10
gmungoc
Merge branch 'feature/JAL-3169cancelOverwrite' into
tree
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commitdiff
2018-12-10
gmungoc
JAL-1421 added type to List and Vector
feature/JAL-3169cancelOverwrite
tree
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commitdiff
2018-12-10
gmungoc
JAL-3169 leave file browser open on Cancel in overwrite...
tree
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commitdiff
2018-12-10
gmungoc
JAL-3048 DialogRunner changes (wip)
tree
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commitdiff
2018-12-06
gmungoc
JAL-3048 response() renamed addResponse(); checkstyle...
tree
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commitdiff
2018-12-03
gmungoc
JAL-3063 Castor removed from codebase
tree
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commitdiff
2018-11-15
gmungoc
JAL-3032 JAL-2344 project files are 'identifiable'
tree
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commitdiff
2018-11-14
gmungoc
JAL-3032 don't throw Exception to signal chain not...
tree
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commitdiff
2018-11-08
gmungoc
JAL-3048 override showOpenDialog with JalviewJS compati...
tree
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commitdiff
2018-11-06
hansonr
JAXB marshalling by JavaScript successfully unmarshalle...
tree
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commitdiff
2018-11-02
Ben Soares
JAL-3141 Tests now available and working, bringing...
tree
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commitdiff
2018-11-02
hansonr
Marshalling produces valid ZIP file. Unmarshalling...
tree
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commitdiff
2018-11-01
gmungoc
Merge branch 'Jalview-BH/JAL-3026' into
tree
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commitdiff
2018-10-31
Ben Soares
JAL-3141 Preferences 'Backups' tab now working. Doesn...
tree
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commitdiff
2018-10-31
gmungoc
Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into...
feature/JAL-3144noJTree
tree
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commitdiff
2018-10-29
gmungoc
JAL-3038 add ActionListener and FocusListener to SwingJ...
tree
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commitdiff
2018-10-25
Ben Soares
JAL-3141 Ostensibly all backups working for alignment...
tree
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commitdiff
2018-10-24
Ben Soares
JAL-3141 Code checkout. Not compiling.
tree
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commitdiff
2018-10-24
Ben Soares
JAL-3141 Code checkout. Not compiling.
tree
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commitdiff
2018-10-23
Ben Soares
BackupFilter and other unfinished business
tree
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commitdiff
2018-10-22
Ben Soares
JAL-3141 Taken the backing up code out of FileChooser...
tree
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commitdiff
2018-10-22
Ben Soares
JAL-3141 Taken the backing up code out of FileChooser...
tree
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commitdiff
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