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JAL-3763 Javadoc, check for null, additional tests
[jalview.git] / src / jalview / util /
2020-10-22 gmungocJAL-3751 only merge strictly contiguous ranges of mappings tree | commitdiff
2020-08-05 gmungocJAL-3700 fix for propagation of sort commands tree | commitdiff
2020-08-03 gmungocJAL-3700 check for 'covering' mapping when matching... tree | commitdiff
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop tree | commitdiff
2020-05-18 gmungocJAL-3613 remove debug code committed in error tree | commitdiff
2020-05-01 gmungocJAL-3613 check sequence overlap when matching search... tree | commitdiff
2020-04-21 Jim ProcterJAL-3407 add GPL license to Jalview source files tree | commitdiff
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3574filterByPOS' into documentati... tree | commitdiff
2020-04-14 Jim ProcterMerge branch 'bug/JAL-3529_uniprotidsinstockholm' into... tree | commitdiff
2020-04-13 gmungocJAL-3574 Matcher with integer/long value pattern (e... tree | commitdiff
2020-04-07 BobHansonJAL-3589 (old Platform) fix for Jalvew-JS/develop only. tree | commitdiff
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-03-09 gmungocJAL-3528 unit tests added for failed lookup, Javadoc tree | commitdiff
2020-02-14 Jim Procterfix for JAL-3529 tree | commitdiff
2020-02-14 Jim ProcterJAL-1354 JAL-3528 fix bug from b594d516dac69eebcccdc743... tree | commitdiff
2020-02-12 Jim ProcterJAL-1354 JAL-3528 report missing keys for MessageManage... tree | commitdiff
2020-01-28 gmungocMerge branch 'feature/JAL-3121gffAttributeMap' into... tree | commitdiff
2019-11-19 gmungocJAL-3210 use JSUtil methods getFileBytes, getApplet tree | commitdiff
2019-11-12 gmungocJAL-3274 resource path correction, code tidying (consta... tree | commitdiff
2019-11-05 gmungocJAL-3120 JAL-3130 can't read "java.specification.versio... tree | commitdiff
2019-11-05 gmungocJAL-3210 JAL-3263 redo 'Mandarin' character for JS... tree | commitdiff
2019-11-01 Ben SoaresJAL-3474 removed all .cvsignore files stored in the... improvement/JAL-3474_lots_of_.cvsignore_files tree | commitdiff
2019-10-08 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2019-08-22 gmungocJAL-3121 round trip GFF attributes including map-valued... tree | commitdiff
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge tree | commitdiff
2019-07-10 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-06-18 Ben SoaresJAL-3312 Fixed SHIFT-CMD/SHIFT-CTRL Key combinations... tree | commitdiff
2019-06-12 Ben SoaresJAL-3295 Fixed CMD-select of sequences in alignment... tree | commitdiff
2019-06-11 gmungocJAL-3187 CDS has same dataset sequence as transcript tree | commitdiff
2019-05-02 gmungocJAL-3244 renamed Platform method for clarity bug/JAL-3244jmolWindows tree | commitdiff
2019-05-01 gmungocJAL-3244 ignore file path separator when comparing... tree | commitdiff
2019-04-30 gmungocJAL-3241 simplified enum constructors for classloadabil... tree | commitdiff
2019-04-16 hansonrcaching of DnD files dropped tree | commitdiff
2019-04-15 Ben SoaresJAL-3130 Helper classes to take Class Exceptions when... tree | commitdiff
2019-04-11 Jim ProcterMerge branch 'develop' into task/JAL-3130_Java_11_inves... tree | commitdiff
2019-04-09 hansonrbetter comment regarding setting recognized ajax-enable... tree | commitdiff
2019-04-05 hansonrFile caching activated explicitly in Platform tree | commitdiff
2019-04-05 hansonrcommand line fix tree | commitdiff
2019-04-05 hansonrfixes for Jalview command-line URI code tree | commitdiff
2019-04-04 gmungocJAL-3220 j2sIgnore on 3 more main methods tree | commitdiff
2019-04-04 gmungocJAL-3220 j2sIgnore on main methods on test / utility... tree | commitdiff
2019-04-03 hansonrreplacing @j2sNative with @j2sIgnore where appropriate... tree | commitdiff
2019-04-03 hansonrj2sNative clean-up. Fixes problem with second try of... tree | commitdiff
2019-04-02 hansonr#210 Fixes Ensembl fetch problem (really) tree | commitdiff
2019-04-01 hansonrJSON refactoring of a few methods; fixing JavaScript... tree | commitdiff
2019-03-31 hansonrCache JS adds search of Info for jalview_xxx properties tree | commitdiff
2019-03-28 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2019-03-28 gmungocMerge branch 'feature/JAL-3181linkOrdering' into develop tree | commitdiff
2019-03-27 hansonrconsolidation of Platform isJS calls tree | commitdiff
2019-03-27 hansonrisJS cleanup tree | commitdiff
2019-03-27 hansonrPlatform comment about isPopupTrigger Jalview-JS/developPreFrameEmbedding tree | commitdiff
2019-03-26 hansonrupgraded Platform.java tree | commitdiff
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat... tree | commitdiff
2019-03-19 Ben SoaresJAL-3130 Merge of JAL-3130_Java_11_investigations-Ben... tree | commitdiff
2019-03-13 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2019-03-04 gmungocMerge remote-tracking branch 'origin/tasks/JAL-3035_rem... tree | commitdiff
2019-02-04 hansonrrefactoring for DBMODList tree | commitdiff
2019-01-29 hansonrJSON writing fix, JColorChooser (mnemonic change) fix tree | commitdiff
2019-01-29 hansonrmore iterators out; some time checks tree | commitdiff
2019-01-26 hansonrremoving cyclic call tree | commitdiff
2019-01-26 hansonrJalview.isJS() --> Platform.isJS(), DBRefEntry[] -... tree | commitdiff
2019-01-25 hansonrtiming code tree | commitdiff
2019-01-25 hansonrJSON refactoring tree | commitdiff
2019-01-21 hansonradded Platform settings separating mouse use of win... tree | commitdiff
2019-01-21 hansonradded Platform settings separating mouse use of win... tree | commitdiff
2019-01-21 hansonrisAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA... tree | commitdiff
2019-01-21 hansonrisAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA... tree | commitdiff
2019-01-21 hansonrcomments only tree | commitdiff
2019-01-04 gmungocJAL-3181 simplified code and test tree | commitdiff
2019-01-03 gmungocJAL-3181 order link menu items tree | commitdiff
2018-12-18 gmungocJAL-3048 DialogRunnerI reduced to minimal implementation tree | commitdiff
2018-12-13 Ben SoaresJAL-3130 Use non-deprecated check for Mac CMD key press tree | commitdiff
2018-12-10 gmungocJAL-3048 wip externalise trigger from RunResponse tree | commitdiff
2018-12-10 gmungocJAL-3048 DialogRunner changes (wip) tree | commitdiff
2018-12-06 gmungocJAL-3048 response() renamed addResponse(); checkstyle... tree | commitdiff
2018-11-27 gmungocJAL-3163 only log missing message keys once each tree | commitdiff
2018-11-01 gmungocMerge branch 'feature/JAL-3143ensemblJSON' into tree | commitdiff
2018-10-25 gmungocJAL-3143 comma-delimited feature attributes for alleles, tree | commitdiff
2018-09-18 Jim ProcterJAL-3035 more dedasification tree | commitdiff
2018-07-23 gmungocJAL-3048 all image export (alignment, tree, PCA, Jmol... tree | commitdiff
2018-07-20 gmungocJAL-3048 JalviewJS compliant use of LineartOptions... tree | commitdiff
2018-07-20 gmungocJAL-3048 revised AlignExportSettings dialog with respon... tree | commitdiff
2018-07-19 gmungocJAL-3048 inlined 1-line methods, small refactor of... tree | commitdiff
2018-07-17 gmungocJAL-3068 LineartOptions for EPS/HTML/SVG, new preferenc... task/JAL-3068lineartDialog tree | commitdiff
2018-07-09 gmungocJAL-3048 EditNameDialog modified for JalviewJS (layout... tree | commitdiff
2018-07-06 Jim ProcterJAL-3048 internalDialog with dialogRunner tree | commitdiff
2018-07-03 Jim ProcterJAL-3048 allow a default response handler to be set tree | commitdiff
2018-07-02 Jim ProcterJAL-3048 attempt to catch Object(NaN) … probably doesn... tree | commitdiff
2018-07-02 Jim ProcterJAL-3048 todo for export SVG/PNG/EPS tree | commitdiff
2018-07-02 Jim ProcterJAL-3048 allow a chain of responses for a particular... tree | commitdiff
2018-06-29 Jim ProcterJAL-3048 jalview.utils.dialogrunner.DialogRunner allows... tree | commitdiff
2018-06-28 Jim ProcterJAL-3048 TODOs for refactoring JalviewFileChooser pattern tree | commitdiff
2018-06-27 gmungocJAL-3032 explicit Integer.intValue() conversion for... tree | commitdiff
2018-06-23 hansonrJAL-3032 BrowserLauncher simplified for JS tree | commitdiff
2018-06-20 hansonrBob first commit JAL-3032 tree | commitdiff
2018-06-20 hansonrMessageManager logger to log4j tree | commitdiff
2018-06-20 gmungocJAL-3032 load properties as "java.properties" tree | commitdiff
2018-06-04 gmungocJAL-3019 correctly form toRange of 'traversed' MapList tree | commitdiff
2018-05-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-05-04 gmungocJAL-2965 graduate brightness on z-axis from centre... tree | commitdiff
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