JAL-2798 tree frame is now added to active views when added to Jalview
[jalview.git] / src / jalview / viewmodel /
2017-12-18 kjvdheideJAL-1953 -External from all interfaces names
2017-12-11 kjvdheideJAL-1953 start on making everything interface based
2017-11-20 kjvdheideMerge remote-tracking branch 'origin/releases/Release_2...
2017-11-17 kiramtMerge branch 'develop' into bug/JAL-2837 bug/JAL-2837
2017-11-15 kiramtJAL-2840 fix wrapped scrolling when using cursor at...
2017-11-14 kiramtJAL-2831 tidies and tests
2017-11-14 kiramtJAL-2831 tidy
2017-11-14 kiramtJAL-2831 Attempt at cursor fix for wrapped mode
2017-11-14 kiramtJAL-2831 deal with hidden cols and seqs in new cursor...
2017-11-14 kiramtJAL-2831 Added move viewport event and set up cursor...
2017-11-13 kjvdheideJAL-2805 undid accidental double (buggy) binding, more...
2017-11-07 kiramtJAL-2774 Added javadoc for new event parameters imp/JAL-2774
2017-10-31 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-10-26 Jim ProcterJAL-2488 patch causes of NPE during testStoreAndRecover...
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2667mouseWheelWrapped' into develop
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2727closeAllFreeMemory' into...
2017-10-13 kiramtJAL-2774 Created single event for update to both start...
2017-10-11 kiramtJAL-2742 removed unused getViewAsCigars
2017-09-14 gmungocJAL-2727 null more fields in AlignmentViewport.dispose...
2017-09-13 gmungocJAL-2727 null additional references on close
2017-09-12 gmungocRevert "JAL-2727 null hconsensus, "
2017-09-12 gmungocJAL-2727 null hconsensus,
2017-09-12 gmungocJAL-2727 ensure ViewportRanges (and gapcounts) are...
2017-08-23 gmungocJAL-2667 tests added, update status bar and tooltip
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList
2017-08-16 Jim ProcterJAL-2418 add GPL to main sources
2017-08-16 Jim ProcterJAL-2418 source formatting
2017-08-10 gmungocJAL-2593 don't filter out 'colour by label' features
2017-08-09 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-08-08 gmungocJAL-2560 alternative fix (reinstate lost line of code)
2017-08-08 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-08-08 gmungocJAL-2649 JAL-2650 wait for Conservation calc to complet...
2017-08-01 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-08-01 gmungocJAL-2611 reinstate missed merge - again!
2017-08-01 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-08-01 gmungocMerge branch 'feature/JAL-2611' into develop
2017-07-23 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-07-22 gmungocJAL-2624 check feature colour threshold when colouring...
2017-07-22 kiramtMerge branch 'develop' into feature/JAL-2611
2017-07-19 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-07-18 kiramtJAL-2611 Tidies, initial unit tests
2017-07-18 gmungocJAL-147 corrected calculation of vertical scroll positi...
2017-07-18 kiramtJAL-2611 Better
2017-07-17 kiramtJAL-2611 Still not happy with behaviour
2017-07-14 kiramtJAL-2611 First pass, not thrilled with hidden column...
2017-07-14 kiramtMerge branch 'feature/JAL-2613' into feature/JAL-2611
2017-07-14 kiramtJAL-2611 Pre-merge checkin
2017-07-13 kiramtJAL-2611 Added overview dimensions test for position...
2017-07-13 kiramtJAL-2613 Unit tests and a fix. Phew.
2017-07-12 kiramtJAL-2613 Centre alignment at click point
2017-07-06 gmungocJAL-1858 scrollToWrappedVisible preserve any horizontal...
2017-07-06 gmungocJAL-147 prevent vertical Overview box movement in wrapp...
2017-07-06 gmungocJAL-147 unit test for hide/show sequences update Viewpo...
2017-07-05 gmungocJAL-147 prevent overview box move up over hidden first...
2017-07-04 gmungocJAL-147 revised update of startSeq, endSeq on unhide...
2017-07-04 gmungocJAL-147 unit tests added, unused setEndRes removed
2017-07-04 gmungocJAL-147 corrected update of ViewportRanges for show...
2017-07-04 gmungocJAL-147 update ViewportRanges height after show/hide...
2017-07-04 gmungocJAL-147 extract local variable for ease of debugging
2017-07-03 gmungocMerge branch 'develop' into bug/JAL-147scrollWrappedView
2017-07-03 gmungocJAL-147 don't scroll Overview box outside panel dimensions
2017-07-03 gmungocJAL-147 ViewportRanges calculate wrapped vertical scrol...
2017-06-30 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-06-30 gmungocJAL-147 don't page up above origin, repaint ids for...
2017-06-30 gmungocJAL-2602 pulled up identical methods to base class
2017-06-30 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-06-29 gmungocJAL-147 improved wrapped scrolling (including Overview...
2017-06-28 kiramtJAL-2600 updates following review
2017-06-27 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-06-09 gmungocJAL-2593 avoid redundant rendering of co-located features
2017-06-06 kiramtJAL-2591 Removed getHiddenRegions()==null checks which...
2017-06-05 gmungocMerge branch 'features/JAL-2446NCList' into
2017-06-05 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-06-02 kiramtJAL-2577 Don't allow viewport ranges below 0. Unit... bug/JAL-2577
2017-06-02 gmungocMerge branch 'features/JAL-2446NCList' into features...
2017-06-01 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-06-01 gmungocJAL-2754 Sequence.findFeatures(fromCol, toCol) features/JAL-2754findFeaturesByColumn
2017-05-31 gmungocJAL-2483 JAL-2575 don't sort newly discovered features
2017-05-31 gmungocJAL-2574 preparation for Sequence.findFeatures(col1...
2017-05-30 kiramtJAL-2573 Fixes for alignment < viewport width, and... JAL-2571
2017-05-30 kiramtJAL-2571 Corrected alignment width/height checks to...
2017-05-30 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-05-29 Jim ProcterMerge branch 'bug/JAL-2034contextchange' into develop
2017-05-29 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-05-27 Jim ProcterMerge branch 'bug/JAL-2491' into develop
2017-05-24 kiramtJAL-2034 Added isDefined flag to SequenceGroup
2017-05-23 gmungocJAL-2490 find features for export as GFF, JAL-2548...
2017-05-22 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-05-17 gmungocMerge branch 'develop' into bug/JAL-2510amendFeatures
2017-05-16 kiramtMerge branch 'develop' into bug/JAL-2491
2017-05-16 kiramtJAL-2491 Better merge
2017-05-15 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-05-15 kiramtJAL-2491 Better merge but not quite right yet
2017-05-15 Jim ProcterJAL-2371 create a default ResidueShader when constructi...
2017-05-15 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-05-15 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-05-12 kiramtJAL-2491 Tidy
2017-05-12 kiramtJAL-2491 Tidies to Overview panel calls in light of...
2017-05-12 Jim ProcterMerge branch 'features/JAL-2435splitScreenFont' into...
2017-05-12 kiramtJAL-2491 Renamed comp scrolling flag for consistency...
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