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fix for JAL-2922 - update states all at once and then refresh
[jalview.git]
/
src
/
jalview
/
viewmodel
/
2017-05-12
kiramt
JAL-2491 Renamed comp scrolling flag for consistency...
tree
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commitdiff
2017-05-12
kiramt
JAL-2491 Unit test updates
tree
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commitdiff
2017-05-11
kiramt
JAL-2491 Unit tests and updates
tree
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commitdiff
2017-05-10
kiramt
JAL-2491 Make it work with cursor movement
tree
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commitdiff
2017-05-10
kiramt
JAL-2491 Cursor scrolling
tree
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commitdiff
2017-05-09
kiramt
JAL-2491 Tidies and more refactoring
tree
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commitdiff
2017-05-09
gmungoc
JAL-2483 JAL-2481 fixed findAllFeatures to handle null...
tree
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commitdiff
2017-05-08
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-08
kiramt
JAL-2491 More wrap corrections
tree
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commitdiff
2017-05-08
kiramt
JAL-2491 Tweaks to avoid scroll problems at bottom...
tree
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commitdiff
2017-05-08
kiramt
JAL-2491 Started moving other scrolling fns into viewpo...
tree
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commitdiff
2017-05-05
gmungoc
Merge branch 'develop' into features/JAL-2435splitScree...
tree
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commitdiff
2017-05-05
gmungoc
JAL-964 JAL-2510 update Feature Settings from Amend...
tree
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commitdiff
2017-05-05
kiramt
Merge remote-tracking branch
tree
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commitdiff
2017-05-05
kiramt
Merge remote-tracking branch 'origin/develop' into
features/JAL-2388hiddencolumnschanges
tree
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commitdiff
2017-05-05
kiramt
Merge remote-tracking branch 'origin/develop' into
tree
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commitdiff
2017-05-04
Jim Procter
Merge branch 'features/JAL-2393customMatrices' into...
tree
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commitdiff
2017-05-04
Jim Procter
Merge branch 'features/JAL-2393customMatrices' into...
tree
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commitdiff
2017-05-03
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-03
Jim Procter
JAL-1933 JAL-2501 i18n for all auto calculated descriptions
features/JAL-2432_annotbypercent
tree
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commitdiff
2017-05-03
kiramt
JAL-2491 sort of working overview/find interaction...
tree
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commitdiff
2017-05-02
gmungoc
JAL-2499 JAL-2403 push 'configure for view' inside...
tree
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commitdiff
2017-05-02
kiramt
JAL-2491 first addition of new event
tree
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commitdiff
2017-04-28
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-04-28
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
tree
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commitdiff
2017-04-27
Jim Procter
JAL-1933 consensus calculation doesn’t depend on occupa...
tree
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commitdiff
2017-04-27
Jim Procter
JAL-1933 only create and add occupancy row to alignment...
tree
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commitdiff
2017-04-27
Jim Procter
JAL-1933 occupancy row has a space below it for counts
tree
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commitdiff
2017-04-26
gmungoc
JAL-2490 findFeaturesAtRes with performant feature...
tree
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commitdiff
2017-04-26
kiramt
JAL-2388 Tidies and unit tests
tree
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commitdiff
2017-04-25
kiramt
JAL-2388 Working hidden regions hide/show in desktop
tree
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commitdiff
2017-04-24
kiramt
Merge remote-tracking branch
tree
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commitdiff
2017-04-24
kiramt
JAL-2388 Finished split of hidden columns and selected...
tree
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commitdiff
2017-04-24
kiramt
JAL-2388 Hidden cols separated from column selection...
tree
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commitdiff
2017-04-21
kiramt
JAL-2388 Tidies
tree
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commitdiff
2017-04-21
kiramt
JAL-2388 Make sure resizing still works
tree
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commitdiff
2017-04-21
kiramt
JAL-2388 Alignment col and row collections with iterators
tree
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commitdiff
2017-04-20
gmungoc
JAL-2483 JAL-2481 findAllFeatures without scanning...
tree
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commitdiff
2017-04-19
kiramt
Merge remote-tracking branch 'origin/develop' into
tree
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commitdiff
2017-04-10
gmungoc
JAL-2403 removed remaining jvCalcMode references from PCA
tree
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commitdiff
2017-04-07
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
tree
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commitdiff
2017-04-03
gmungoc
Merge branch 'develop' into features/JAL-2435splitScree...
tree
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commitdiff
2017-03-31
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-03-31
gmungoc
Merge branch 'develop' into bug/JAL-2431splitFrameNewView
bug/JAL-2431splitFrameNewView
tree
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commitdiff
2017-03-31
gmungoc
JAL-2435 slightly more sensible behaviour changing...
tree
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commitdiff
2017-03-29
kiramt
JAL-2388 New rendering code, extensions to support...
tree
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commitdiff
2017-03-23
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
tree
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commitdiff
2017-03-22
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-03-22
kiramt
Merge remote-tracking branch 'origin/develop' into
tree
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commitdiff
2017-03-22
kiramt
Merge remote-tracking branch 'origin/develop' into
tree
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commitdiff
2017-03-21
kiramt
JAL-2388 Made ViewportRanges final
tree
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commitdiff
2017-03-21
Jim Procter
Merge branch 'features/JAL-2388OverviewWindow' into...
tree
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commitdiff
2017-03-17
kiramt
JAL-2388 Renamed column and row subtraction functions
tree
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commitdiff
2017-03-16
kiramt
JAL-2388 Applied ViewportRanges to code
tree
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commitdiff
2017-03-16
kiramt
JAL-2388 Renamed viewport position props to viewport...
tree
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commitdiff
2017-03-16
kiramt
JAL-2439 Out-by-one in setting endRes/endSeq
tree
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commitdiff
2017-03-15
gmungoc
JAL-2431 show cDNA consensus after New View in split...
tree
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commitdiff
2017-03-15
kiramt
JAL-2388 Unit tests and tidies
tree
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commitdiff
2017-03-14
kiramt
JAL-2388 Working overview panel
tree
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commitdiff
2017-03-14
gmungoc
JAL-2438 Javadoc updates
tree
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commitdiff
2017-03-14
gmungoc
JAL-2438 comment/Javadoc tidies
tree
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commitdiff
2017-03-13
gmungoc
JAL-2438 FeatureColourFinder refactored from FeatureRen...
tree
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commitdiff
2017-03-10
kiramt
JAL-2388 Moving some alignment panel logic into overvie...
tree
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commitdiff
2017-03-07
kiramt
JAL-2388 Fixed inherited&new out-by-one errors; further...
tree
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commitdiff
2017-03-07
kiramt
JAL-2388 Additional unit tests
tree
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commitdiff
2017-03-07
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-03-06
kiramt
JAL-2388 Dependency tidy
tree
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commitdiff
2017-03-06
kiramt
JAL-2388 Remove OverviewDimensions dependency on gui...
tree
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commitdiff
2017-03-06
kiramt
JAL-2388 Corrected overview panel behaviour, updated...
tree
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commitdiff
2017-03-03
kiramt
JAL-2388 Initial removal of hidden cols/seqs out of...
tree
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commitdiff
2017-03-01
kiramt
JAL-2388 Reverted to previous
tree
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commitdiff
2017-03-01
gmungoc
Merge branch 'features/JAL-2295setChimeraAttributes...
tree
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commitdiff
2017-03-01
kiramt
JAL-2388 Preliminary refactor check-in, does not compile
tree
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commitdiff
2017-02-28
kiramt
JAL-2388 First move of endRes etc out of AlignmentViewp...
tree
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commitdiff
2017-02-27
kiramt
JAL-2388 Make startRes,startSeq,endRes,endSeq private...
tree
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commitdiff
2017-02-27
gmungoc
JAL-1632 dialog to calculate either Tree or PCA
tree
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commitdiff
2017-02-27
kiramt
JAL-2388 Minor refactoring
tree
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commitdiff
2017-02-27
gmungoc
JAL-1632 add score model params to PCAModel and PCA...
tree
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commitdiff
2017-02-23
gmungoc
JAL-2403 JAL-1483 changes to ScoreModelI hierarchy...
tree
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commitdiff
2017-02-21
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
tree
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commitdiff
2017-02-21
kiramt
Merge branch 'develop' into features/JAL-2388OverviewWindow
tree
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commitdiff
2017-02-20
Jim Procter
Merge branch 'features/JAL-2379pcaMemory' into develop
tree
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commitdiff
2017-02-13
gmungoc
JAL-1632 JAL-2416 load score matrices from file, as...
tree
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commitdiff
2017-02-10
gmungoc
JAL-2371 small move of code, typo correction
tree
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commitdiff
2017-02-09
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-02-09
kiramt
JAL-2388 Initial refactor of OverviewPanel
tree
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commitdiff
2017-02-09
gmungoc
Merge branch 'develop' into features/JAL-2379pcaMemory
features/JAL-2379pcaMemory
tree
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commitdiff
2017-02-09
gmungoc
JAL-2405 set initial selection group alignment context
tree
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commitdiff
2017-02-08
gmungoc
JAL-2405 set context on selection group for tailored...
tree
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commitdiff
2017-02-07
gmungoc
JAL-2397 flag provided for 2.10.1 PCA gap calculation...
tree
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commitdiff
2017-02-03
gmungoc
JAL-2379 'direct' pairwise score calculation for PCA...
tree
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commitdiff
2017-01-31
gmungoc
JAL-2371 commented code removed only
tree
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commitdiff
2017-01-31
gmungoc
JAL-2371 rename global/viewportColourScheme to residueS...
tree
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commitdiff
2017-01-31
gmungoc
JAL-2385 more tests/bug fixes mostly for gui.SliderPane...
tree
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commitdiff
2017-01-27
gmungoc
JAL-2379 commented out code removed
tree
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commitdiff
2017-01-27
gmungoc
JAL-2371 CollectionColourScheme renamed ResidueShader...
tree
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commitdiff
2017-01-27
gmungoc
JAL-2360 JAL-2371 updates from review CR-JAL-1
tree
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commitdiff
2017-01-23
gmungoc
JAL-2386 unit tests for change colour (and minor refact...
tree
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commitdiff
2017-01-23
gmungoc
JAL-2386 simplify changeColour (doesn't change colour...
tree
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commitdiff
2017-01-17
gmungoc
JAL-2379 use SparseMatrix for encoded sequences, tidy...
tree
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commitdiff
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