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JAL-1065 per sequence and per-alignment scores added to annotation
[jalview.git] / src / jalview / ws /
2012-05-23 jprocterTODO for JAL-976 tree | commitdiff
2012-05-23 jprocterJAL-961 - annotatable datamodel objects can be queried... tree | commitdiff
2012-05-14 jprocterJAL-1095 - todo tree | commitdiff
2012-05-14 jprocterjavadoc tree | commitdiff
2012-05-11 jprocterJAL-972 workaround for working out source URL for pre... tree | commitdiff
2012-05-11 jprocterformatting tree | commitdiff
2012-05-11 jprocterJAL-972 migration from dasobert to jdas registry URLs tree | commitdiff
2012-05-11 jprocterJAL-972 local do not have a coordsys element with sourc... tree | commitdiff
2012-05-11 jprocterJAL-424 TODO: new method signature for local source... tree | commitdiff
2012-05-10 jprocterJAL-1085 - ensure sequence fetching client waits around... tree | commitdiff
2012-05-10 jprocterJAL-972 JAL-1084 propagate reference to local authentic... tree | commitdiff
2012-05-10 jprocterJAL-1083 - graceful failover to single ID query mode... tree | commitdiff
2012-05-10 jprocterformatting tree | commitdiff
2012-05-10 jprocterJAL-1083 graceful failover to one ID per sequences... tree | commitdiff
2012-04-24 jprocterJAL-1075, JAL-1061, JAL-1064 - introduced second tier... tree | commitdiff
2012-04-24 jprocterJAL-1064 sequence database sources are stored and retri... tree | commitdiff
2012-04-24 jprocterJAL-972 correct das registry default URL (JDAS automati... tree | commitdiff
2012-04-24 jprocterJAL-972 - test to distinguish sources based on age... tree | commitdiff
2012-04-24 jprocterJAL-1074 fix - missing tag indicating alignments are... tree | commitdiff
2012-04-20 jprocterJAL-972, JAL-1072 new default dasregistry.org registry... tree | commitdiff
2012-04-20 jprocterJAL-1064 - refactor to iterate over many sources associ... tree | commitdiff
2012-04-20 jprocterJAL-972 - correct name when constructing db-source... tree | commitdiff
2012-03-30 jprocterJAL-1062 - recognise and split off the range qualifier... tree | commitdiff
2012-03-30 jprocterMerge branch 'JAL-972-dasobert-to-jdas' into JAL-972... tree | commitdiff
2012-03-30 jprocterlogic bug tree | commitdiff
2012-03-28 jprocterJAL-1060 - record which services are invalid, valid... tree | commitdiff
2012-03-27 jprocter(JAL-976) - consistent ordering of services according... tree | commitdiff
2012-03-27 jprocterJAL-976 - hack to provide consistent ordering of JABAWS... tree | commitdiff
2012-03-27 jprocter(JAL-976) refactor JABAWS1 list tree | commitdiff
2012-03-01 jprocterMerge branch 'Release_2_7_Branch' into develop tree | commitdiff
2012-03-01 jprocterdebug local source management buttons and formatting tree | commitdiff
2012-03-01 jprocterrevised version of Jdas with simpler connectionProperty... tree | commitdiff
2012-02-29 jproctermove from dasobert to jdas multithreaded feature fetchi... tree | commitdiff
2012-02-29 jprocterrefactoring dassequencesource code fallout tree | commitdiff
2012-02-29 jprocterrefactored das sequence source creation code to the... tree | commitdiff
2012-02-29 jprocterremoved excess imports tree | commitdiff
2012-02-29 jprocterupdated das sequence source for jdas client and refacto... tree | commitdiff
2012-02-29 jprocterJAL-966 todo for jalview 3 api tree | commitdiff
2012-02-29 jprocterjalview das registry and source api and jdas specific... tree | commitdiff
2012-02-29 jprocterjdas doesn't need a listener for das sequence retrieval... tree | commitdiff
2012-02-13 jprocterremove dead imports tree | commitdiff
2012-02-13 jprocter(JAL-972) jdas source retrieval and use of jdas structu... tree | commitdiff
2012-02-12 Jim ProcterJAL-715 - remove platform dependent includes tree | commitdiff
2011-11-14 jprocterJAL-975 - ensure sequences are padded with gaps before... tree | commitdiff
2011-11-07 jprocter(JAL-974) - remove sun-internal class and use message... tree | commitdiff
2011-11-07 jprocter(JAL-976,JAL-975) disorder client menu items and check... tree | commitdiff
2011-11-07 jprocter(JAL-974,JAL-975) refactor common code for a JABAWS... tree | commitdiff
2011-11-07 jprocter(JAL-975) formatting tree | commitdiff
2011-11-04 jprocter(JAL-975) ensure AACons is only run on protein sequence... tree | commitdiff
2011-11-03 jproctercleanup imports tree | commitdiff
2011-11-03 jprocter(JAL-975) client for amino acid conservation service... tree | commitdiff
2011-11-03 jprocter(JAL-974,JAL-975) new handler for JABAWS sequence and... tree | commitdiff
2011-11-03 jprocter(JAL-976) refactored common code for JABAWS v2 service... tree | commitdiff
2011-11-03 jproctertidy imports tree | commitdiff
2011-11-03 jprocter(JAL-978) discover JABA1 and JABA2 services and generat... tree | commitdiff
2011-11-03 jprocter(JAL-978) refactored JABAWS2 service handle class to... tree | commitdiff
2011-10-10 jprocterupdate author list in license for (JAL-826) tree | commitdiff
2011-10-04 jprocterMerge remote-tracking branch 'remotes/origin/2_5_1_rna_... tree | commitdiff
2011-10-03 jprocterremoved unnecessary parameters and changed alignment... tree | commitdiff
2011-09-27 jprocterpatch name, reference and URL for Multi-Harmony : JAL-724 tree | commitdiff
2011-09-27 jprocterensure server errors return a URL and response document... tree | commitdiff
2011-09-27 jprocterapply version 2.7 copyright tree | commitdiff
2011-09-16 jprocterJAL-940 - removed legacy service options from preferenc... tree | commitdiff
2011-08-30 jprocterJAL-715 store/reset .jalview_properties setting for... tree | commitdiff
2011-08-30 jprocterJAL-715 serialise and deserialise multiple rest client... tree | commitdiff
2011-08-30 jprocterJAL-715 - notify user of parsing problems for results... tree | commitdiff
2011-08-30 jprocterretrieve URL for datasource of packed set tree | commitdiff
2011-08-30 jprocterJAL-715 need to URLencode constant values when serializ... tree | commitdiff
2011-08-29 jprocterJAL-715 - grammar for warning message. tree | commitdiff
2011-08-29 jprocterJAL-919, JAL-715 - prototype service editing dialog... tree | commitdiff
2011-08-29 jprocterJAL-633 simple concrete parameter and option objects... tree | commitdiff
2011-08-29 jprocterJAL-633, JAL-591 - refactored ArgumentI.getValue from... tree | commitdiff
2011-08-25 jprocterJAL-715 - better validation logic tree | commitdiff
2011-08-25 jprocterJAL-715 - prevent empty elements being generated tree | commitdiff
2011-08-24 jprocterJAL-715 bugfixes and refactor of parsing code for use... tree | commitdiff
2011-08-23 jprocterJAL-715 - simple tests and functions for IO of service... tree | commitdiff
2011-08-23 jprocterJAL-715 - allow rest service attributes to be exported... tree | commitdiff
2011-08-17 jprocterJAL-853 use service action attribute to index services... tree | commitdiff
2011-07-25 janengelhardt'Add Rfam database sequence retrieval' merged; JAL-580 tree | commitdiff
2011-07-25 janengelhardtStart merging of Laurens Code tree | commitdiff
2011-07-08 jprocteropen each query result from an alignment datasource... tree | commitdiff
2011-07-07 jprocterSet job title correctly and pass reason why tree | commitdiff
2011-06-28 jprocterfixes JAL-849 - double check after waiting a bit that... tree | commitdiff
2011-04-19 jprocterpatched XML parser to ensure it properly escapes non... tree | commitdiff
2011-04-07 jprocterresolves JAL-805 tree | commitdiff
2011-02-28 jprocterexcess imports tree | commitdiff
2011-01-05 jproctermore robust calculation of partition from possibly... tree | commitdiff
2011-01-05 jprocterinline submission of alignment with correct crlf tree | commitdiff
2011-01-05 jprocterensure group props are recalculated before alignment... tree | commitdiff
2011-01-05 jprocterrevised shmr service tree | commitdiff
2011-01-05 jproctertodo and ensure old annotation/groups are removed befor... tree | commitdiff
2011-01-05 jproctertodo tree | commitdiff
2010-12-17 jprocterfirst publicly accessible test of JAL-724 tree | commitdiff
2010-12-17 jprocterJAL-715 and JAL-724 tree | commitdiff
2010-12-17 jprocterJAL-715 tree | commitdiff
2010-12-17 jprocterrefined modification test tree | commitdiff
2010-12-17 jprocterrefactored gap insert/visible view modification code... tree | commitdiff
2010-12-15 jprocterincremental refinement of results parsing tree | commitdiff
2010-12-15 jprocterallow client to check if the original alignment data... tree | commitdiff
2010-12-15 jprocterjavadoc tree | commitdiff
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