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JAL-3690 Let's enable web services (seriously this time)
[jalview.git] / src / jalview / ws /
2020-11-13 Mateusz WaronwyJAL-3690 separate startup and poll code in SeqAnnotatio... tree | commitdiff
2020-10-21 Mateusz WarownyJAL - 3690 AlignCalc rebuilt - FutureTask-based manager tree | commitdiff
2020-07-22 Mateusz WarownyJAL-3690 changed AWSThread to use Timer instead tree | commitdiff
2020-07-20 Mateusz WarownyJAL-3690 alternative servers menu fix tree | commitdiff
2020-07-17 Mateusz WarownyJAL-3690 restore jws1 JPred tree | commitdiff
2020-07-16 Mateusz WarownyJAL-3690 switching to CompletableFuture to allow chaining tree | commitdiff
2020-07-15 Mateusz WarownyJAL-3690 refactoring web-services discovery tree | commitdiff
2020-07-09 Mateusz WarownyMerge branch 'feature/JAL-3686_slivka_client_js_update... alpha/merge_212_JalviewJS_2112 tree | commitdiff
2020-07-08 Mateusz WarownyJAL-3683 retrieve job status to output stream feature/JAL-3686_slivka_client_js_update tree | commitdiff
2020-07-08 Mateusz WarownyJAL-6386 update slivka client for j2s compatibility tree | commitdiff
2020-05-18 Jim ProcterMerge branch 'alpha/JAL-3362_Jalview_212_alpha' into... tree | commitdiff
2020-04-23 Jim ProcterMerge branch 'develop' into alpha/JAL-3362_Jalview_212_... tree | commitdiff
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-02-04 MMWarownyJAL-3515 Extract core WSDiscoverer methods to a separat... tree | commitdiff
2020-01-28 gmungocMerge branch 'feature/JAL-3121gffAttributeMap' into... tree | commitdiff
2019-12-05 MMWarownyJAL-3066 Comment on ambiguous parameter parsing. tree | commitdiff
2019-12-05 MMWarownyJAL-3066 Change Slivka connection to https tree | commitdiff
2019-11-28 MMWarownyJAL-3066 Fix incorrect URL resolving with /slivka prefix. tree | commitdiff
2019-11-15 MMWarownyJAL-3066 Change server to compbio.dundee.ac.uk/slivka tree | commitdiff
2019-11-04 MMWarownyInclude missing job states. tree | commitdiff
2019-11-01 Ben SoaresJAL-3474 removed all .cvsignore files stored in the... improvement/JAL-3474_lots_of_.cvsignore_files tree | commitdiff
2019-10-11 Mateusz WarownyJAL-3066 Create labels for fields and hack it to work... tree | commitdiff
2019-10-11 Mateusz WarownyMerge remote-tracking branch 'origin/tasks/JAL-3070_wsi... tree | commitdiff
2019-10-11 Mateusz WarownyJAL-3066 change service type naming to avoid menu entry... tree | commitdiff
2019-10-10 Jim ProcterJAL-3070 set calcId and autocalculated flags for annota... tasks/JAL-3070_wsinterfaces tree | commitdiff
2019-10-10 Jim ProcterMerge branch 'tasks/JAL-3070_wsinterfaces' into alpha... tree | commitdiff
2019-10-10 Jim ProcterJAL-3070 registerWorker start its thread automatically... tree | commitdiff
2019-10-09 Mateusz WarownyJAL-3066 Read parameters directly from args list allowi... tree | commitdiff
2019-10-09 Mateusz WarownyJAL-3066 Fix log files retrieval. tree | commitdiff
2019-10-07 Mateusz WarownyJal-3066 Retrieve job log and error log from the server. tree | commitdiff
2019-10-07 Jim ProcterRevert "JAL-3070 JAL-3066 fix initialisation of slivka... tree | commitdiff
2019-10-07 Mateusz WarownyJAL-3066 AACon: pass the instance name of the service... tree | commitdiff
2019-10-07 Mateusz WarownyJAL-3066 Check if annotation and features are present... tree | commitdiff
2019-10-07 Jim ProcterJAL-3066 report job ID when submitted tree | commitdiff
2019-10-07 Jim ProcterJAL-3066 debug info: check response when adding feature... tree | commitdiff
2019-10-07 Jim ProcterJAL-3066 JAL-3070 AACon: pass the name of the service... tree | commitdiff
2019-10-07 Jim ProcterJAL-3066 hack to instantiate the correct client accordi... tree | commitdiff
2019-10-07 Jim ProcterJAL-3070 JAL-3066 provide standard concrete instances... tree | commitdiff
2019-10-07 Jim ProcterJAL-3070 JAL-3066 fix initialisation of slivka ServiceW... tree | commitdiff
2019-10-07 Jim ProcterJAL-3070 formatting tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 reinstate the internal test service URL for... tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 slivka service discovery as a background threa... tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 alignment analysis service worker UI and setti... tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 call checkDone() ASAP to avoid race condition... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 decouple WsMenuEntryProviderI code from JABAWS tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 reorganise prior to refactor tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 make AlignCalcUI service code work only with... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 discoverers return ServiceWithParameter, now... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 decontaminate the ‘preferred service’ methods... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 JAL-3062 tidy up slivka ws menu builder and... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 detect failed/broken annotation web service... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 pull up generic methods for an automatic align... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 TODO tree | commitdiff
2019-10-01 Mateusz WarownyJAL-3066 Sequence annotation services. tree | commitdiff
2019-09-27 Mateusz WarownyJAL-3066 Automatically discoverable Protein sequence... tree | commitdiff
2019-09-26 Jim ProcterJAL-3070 oops - refactor Slivka’s service stub too :) tree | commitdiff
2019-09-26 Jim ProcterJAL-3070 JAL-3066 JAL-3067 refactor annotation web... tree | commitdiff
2019-09-24 Jim ProcterJAL-3070 tidying tree | commitdiff
2019-09-23 Jim ProcterJAL-3066 JAL-3070 pull up non-jabaws specific service... tree | commitdiff
2019-09-23 Mateusz WarownyJAL-3066 Annotation Service Instance stub tree | commitdiff
2019-09-23 Mateusz WarownySlivkaWSDiscoverer formatting fix tree | commitdiff
2019-09-23 Mateusz WarownyJAL-3066 Move common web service methods to abstract... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 configure annotation service manager from... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 rename AbstractJabaCalcWorker to SeqAnnotation... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 ensure RNAAliFold annotation rows display... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 formatting tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 detect presence of existing JABA RNAAliFold... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 match AbstractJabaCalcWorker’s annotation... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 javadoc for (mostly) jabaws specific methods tree | commitdiff
2019-09-20 Jim ProcterJAL-3070 rough-and-ready refactor of JABA SequenceAnnot... tree | commitdiff
2019-09-20 Jim ProcterJAL-3070 JAL-1379 deferred work on annotation based... tree | commitdiff
2019-09-19 Mateusz WarownyJAL-3066 Auto discover multiple sequence alignment... tree | commitdiff
2019-09-16 Mateusz WarownySet the initial value of the choice field to the defaul... tree | commitdiff
2019-09-16 Mateusz WarownyAdd the remaining msa services to the Discoverer tree | commitdiff
2019-09-11 Mateusz WarownyChange choice field to use dropbox instead of radio... tree | commitdiff
2019-09-11 Mateusz WarownyCreate generic msa service instance tree | commitdiff
2019-09-06 Mateusz WarownyMerge remote-tracking branch 'origin/alpha/JAL-3066_Jal... tree | commitdiff
2019-09-06 Mateusz WarownyJAL-3066 Working custom parameters for clustalo tree | commitdiff
2019-09-06 Jim ProcterJAL-3066 fix compile error (@matesuz - this will confli... tree | commitdiff
2019-09-06 Jim ProcterJAL_1426 JAL-3066 update Apache James mime parser and... tree | commitdiff
2019-09-05 Mateusz WarownyJAL-3066 Implement clustaloWS using slivka system. tree | commitdiff
2019-08-22 gmungocJAL-3121 round trip GFF attributes including map-valued... tree | commitdiff
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge tree | commitdiff
2019-07-10 Jim ProcterJAL-3070 standard way of storing/recovering documentati... tree | commitdiff
2019-07-10 Jim ProcterJAL-3070 remove final reference to Jws2Instance tree | commitdiff
2019-07-10 Jim ProcterMerge branch 'tasks/JAL-3070_wsinterfaces' into alpha... tree | commitdiff
2019-07-10 Jim ProcterMerge branch 'merge/JAL-3285_mchmmer_with_211_develop... tree | commitdiff
2019-06-26 Jim ProcterJAL-3332 test to check for duplicate db sources and... tree | commitdiff
2019-06-24 Jim ProcterJAL-3330 dbreffetcher: record any feature display model... tree | commitdiff
2019-06-04 Jim ProcterMerge branch 'develop' into developtomchmmer tree | commitdiff
2019-04-23 Jim ProcterMerge branch 'develop' into bug/JAL-3224_getdown_change... tree | commitdiff
2019-04-17 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2019-04-15 gmungocJAL-3193 no separatge EnsemblGenomes source in Sequence... tree | commitdiff
2019-04-04 gmungocJAL-3220 j2sIgnore on main methods on test / utility... tree | commitdiff
2019-04-04 gmungocJAL-3220 unneeded main methods removed tree | commitdiff
2019-04-03 hansonrj2sNative clean-up. Fixes problem with second try of... tree | commitdiff
2019-03-31 hansonrclean up implicit object refs tree | commitdiff
2019-03-27 hansonrconsolidation of Platform isJS calls tree | commitdiff
2019-03-21 Ben SoaresJAL-3130 Replaced deprecated Class.newInstance() with... tree | commitdiff
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat... tree | commitdiff
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