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JAL-2805 TreeParser now interface based
[jalview.git]
/
src
/
jalview
/
2017-08-16
Jim Procter
JAL-2418 source formatting
tree
|
commitdiff
2017-08-16
kiramt
JAL-2665 Working with hidden columns
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Added hidden columns group selection - almost...
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Selecting on wrapped alignments
tree
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commitdiff
2017-08-16
kiramt
JAL-2556 start to account for wrapped alignments
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Tidy
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 fix resize
tree
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commitdiff
2017-08-16
kiramt
JAL-2556 Code tidy
tree
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commitdiff
2017-08-16
kiramt
JAL-2556 Resolved group update on colouring and escape
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Added sequence group update event.
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Draw selection group - works on scroll but...
tree
|
commitdiff
2017-08-15
kiramt
JAL-2265 turn off NPE
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 choose appropriate alphabet for filtering...
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 source formatting
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 filterNonStandardResidues configurable for...
tree
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commitdiff
2017-08-14
Jim Procter
Merge branch 'patch/JAL-2663_filterAACons' into develop
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2663 flag and filter to exclude non-standard amino...
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2663 source formatting
tree
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commitdiff
2017-08-14
kiramt
JAL-2664 Initial change to drawing hidden regions in...
tree
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commitdiff
2017-08-10
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-10
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-10
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
|
commitdiff
2017-08-10
kiramt
JAL-2587 tidy
tree
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commitdiff
2017-08-10
gmungoc
JAL-2660 used saved value of ignoreGapsInConsensus...
tree
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commitdiff
2017-08-10
kiramt
JAL-2587 Tinkering with progress panel appearance
tree
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commitdiff
2017-08-10
kiramt
JAL-2587 prevented double overview recalc on opening...
tree
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commitdiff
2017-08-10
gmungoc
JAL-2505 apply changed description to new, not deleted...
tree
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commitdiff
2017-08-10
gmungoc
JAL-2658 ensure features dropdown entries are unique
tree
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commitdiff
2017-08-10
gmungoc
JAL-2593 don't filter out 'colour by label' features
tree
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commitdiff
2017-08-10
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
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commitdiff
2017-08-10
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-09
Jim Procter
JAL-2426 Rfam download suffix
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2426 JAL-1270 report Xfam download URL used if...
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2425 raw stockholm download URLs
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2425 remove overloaded getSequenceRecords method...
tree
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commitdiff
2017-08-09
kiramt
JAL-2587 Adjusting height for progress bar
tree
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commitdiff
2017-08-09
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-09
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-09
kiramt
JAL-2587 fiddling with dimensions
tree
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commitdiff
2017-08-09
kiramt
JAL-2587 Keep progress bar panel in position regardless...
tree
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commitdiff
2017-08-09
gmungoc
JAL-2480 inline one method, improve comments
tree
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commitdiff
2017-08-09
Jim Procter
Merge branch 'bug/JAL-2634' into develop
tree
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commitdiff
2017-08-09
Jim Procter
Merge branch 'documentation/JAL-2418_release2102' into...
tree
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commitdiff
2017-08-09
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
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commitdiff
2017-08-09
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-08-08
gmungoc
JAL-2560 alternative fix (reinstate lost line of code)
tree
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commitdiff
2017-08-08
kiramt
JAL-2587 tidies
tree
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commitdiff
2017-08-08
kiramt
JAL-2587 Added progress bar to overview. Not fully...
tree
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commitdiff
2017-08-08
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-08
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-08
gmungoc
JAL-2649 JAL-2650 wait for Conservation calc to complet...
tree
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commitdiff
2017-08-08
gmungoc
JAL-2650 configure new viewport settings before selecti...
tree
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commitdiff
2017-08-07
Jim Procter
Merge branch 'bug/JAL-2592userDefinedScheme' into develop
tree
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commitdiff
2017-08-07
gmungoc
JAL-2609 clear sequence/annotation region before rendering
tree
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commitdiff
2017-08-07
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
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commitdiff
2017-08-07
gmungoc
JAL-2609 erase scale above before drawing scale/hidden...
tree
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commitdiff
2017-08-07
gmungoc
JAL-2609 revised design (always draw all scales, fast...
tree
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commitdiff
2017-08-04
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
|
commitdiff
2017-08-04
kiramt
JAL-2587 First working effort
tree
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commitdiff
2017-08-03
gmungoc
JAL-2643 updated threshold on threshold value focus...
tree
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commitdiff
2017-08-03
gmungoc
JAL-2609 process only up to end of alignment when shift...
tree
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commitdiff
2017-08-03
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-03
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-03
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-03
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-03
gmungoc
JAL-2435 test for 'mirror font' option visible (not...
tree
|
commitdiff
2017-08-03
gmungoc
JAL-2609 erase space below, and other fixes
tree
|
commitdiff
2017-08-03
kiramt
JAL-2587 Attempt to add timed dissolve
tree
|
commitdiff
2017-08-02
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-02
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-02
gmungoc
JAL-2609 further progress towards scroll right fast...
tree
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commitdiff
2017-08-01
Jim Procter
Merge branch 'bug/JAL-2632' into develop
tree
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commitdiff
2017-08-01
gmungoc
JAL-2609 white fill vertical scale before fast paint...
tree
|
commitdiff
2017-08-01
gmungoc
JAL-2609 JAL-2636 ensure scrolled on scale above is...
tree
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commitdiff
2017-08-01
gmungoc
JAL-2636 draw scale marks up to second last column
tree
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commitdiff
2017-08-01
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-01
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-01
gmungoc
JAL-2611 reinstate missed merge - again!
tree
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commitdiff
2017-08-01
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-01
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-01
gmungoc
Merge branch 'feature/JAL-2611' into develop
tree
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commitdiff
2017-08-01
gmungoc
Merge branch 'bug/JAL-2630gradColourUpdateOverview...
tree
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commitdiff
2017-08-01
gmungoc
JAL-2609 progress on scroll left draw new columns
tree
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commitdiff
2017-07-31
kiramt
JAL-2634 Make overview box full height when alignment...
bug/JAL-2634
tree
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commitdiff
2017-07-31
gmungoc
JAL-2623 updated Overview/structure on input of thresho...
bug/JAL-2630gradColourUpdateOverview
tree
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commitdiff
2017-07-31
kiramt
JAL-2634 Added null test for graphics in AnnotationPane...
tree
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commitdiff
2017-07-31
gmungoc
JAL-2622 don't vertical scroll wrapped alignment id...
tree
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commitdiff
2017-07-31
gmungoc
JAL-2623 JAL-2015 set Below Threshold on FeatureColour...
tree
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commitdiff
2017-07-31
gmungoc
JAL-2630 applet update overview on release of threshold...
tree
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commitdiff
2017-07-28
gmungoc
JAL-2609 slightly better updating of left/right scales...
tree
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commitdiff
2017-07-28
kiramt
JAL-2632 Added paintAlignment(true) to show cols code
tree
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commitdiff
2017-07-28
gmungoc
JAL-2609 enabled (still broken/incomplete) fast paint
tree
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commitdiff
2017-07-28
kiramt
JAL-2587 First working attempt
tree
|
commitdiff
2017-07-28
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-07-28
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-07-28
gmungoc
JAL-147 corrected status bar message for wrapped scroll...
tree
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commitdiff
2017-07-28
gmungoc
JAL-2609 first try
tree
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commitdiff
2017-07-28
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-07-28
gmungoc
JAL-2622 no vertical scroll of wrapped alignment from...
tree
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commitdiff
2017-07-28
kiramt
JAL-2587 Added sizing for annotation and positioning...
tree
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commitdiff
next