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[jalview.git]
/
src
/
jalview
/
2006-02-24
amwaterhouse
Features are an array, rendering is faster
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commitdiff
2006-02-16
amwaterhouse
translate cDNA adjusted
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commitdiff
2006-02-16
amwaterhouse
Dont colour gaps
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commitdiff
2006-02-16
amwaterhouse
Read startgroup and endgroup in features file
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commitdiff
2006-02-16
amwaterhouse
Incorporated threshold slider
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commitdiff
2006-02-16
amwaterhouse
SliderPanel removed
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commitdiff
2006-02-16
amwaterhouse
FeatureGroups added
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commitdiff
2006-02-16
amwaterhouse
ShowSeqFeatures selected
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commitdiff
2006-02-16
amwaterhouse
Save featureGroup
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commitdiff
2006-02-16
amwaterhouse
Use featureGroups from featureRenderer
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commitdiff
2006-02-16
amwaterhouse
No longer used for annotation gradient
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commitdiff
2006-02-16
amwaterhouse
Fetch Sequence Features menu added
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commitdiff
2006-02-16
amwaterhouse
Use original colour scheme as base for annotation colouring
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commitdiff
2006-02-16
amwaterhouse
Allows saving of sequence description
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commitdiff
2006-02-16
amwaterhouse
Typo
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commitdiff
2006-02-15
amwaterhouse
Dont use FeatureFetcher if nucleotide
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commitdiff
2006-02-15
amwaterhouse
Threshold single element
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commitdiff
2006-02-15
amwaterhouse
Add new Feature
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commitdiff
2006-02-15
amwaterhouse
Set as feature, not new group
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commitdiff
2006-02-15
amwaterhouse
Saves and loads sequence description
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commitdiff
2006-02-15
amwaterhouse
Keeps up to date with featureRenderer
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commitdiff
2006-02-15
amwaterhouse
Threshold is single element
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commitdiff
2006-02-15
amwaterhouse
if shift down bug fixed
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commitdiff
2006-02-15
amwaterhouse
No more supergroup, set Sequence name / Description
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commitdiff
2006-02-15
amwaterhouse
New FEature replaces new group
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commitdiff
2006-02-15
amwaterhouse
Threshold is a single element
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commitdiff
2006-02-15
amwaterhouse
SetThreshold replaces addGraphLine
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commitdiff
2006-02-15
amwaterhouse
FeatureGroups added
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commitdiff
2006-02-15
amwaterhouse
Removed SuperGroup
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commitdiff
2006-02-15
amwaterhouse
Save sequence description in VAMSAS sequence
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commitdiff
2006-02-15
amwaterhouse
Check description and status are not null in mouse...
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commitdiff
2006-02-15
amwaterhouse
Keeps up to date with features
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commitdiff
2006-02-15
amwaterhouse
Feature replaces new superGroup
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commitdiff
2006-02-15
amwaterhouse
Feature Groups added
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commitdiff
2006-02-15
amwaterhouse
Graphline is a single line
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commitdiff
2006-02-15
amwaterhouse
Features file has startgroup, endgroup
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commitdiff
2006-02-15
amwaterhouse
No longer used
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commitdiff
2006-02-13
amwaterhouse
Missing brace
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commitdiff
2006-02-13
amwaterhouse
Parsing features file - dont adjust for alignment position
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commitdiff
2006-02-10
amwaterhouse
Update overview if features updated
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commitdiff
2006-02-10
amwaterhouse
Overview displays features
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commitdiff
2006-02-09
amwaterhouse
Removed file
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commitdiff
2006-02-09
amwaterhouse
Feature Settings added to Applet
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commitdiff
2006-02-09
amwaterhouse
If conservation is zero, colour is white
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commitdiff
2006-02-09
amwaterhouse
Drop target must initialise sequences
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commitdiff
2006-02-09
amwaterhouse
New implementation for holding search results
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commitdiff
2006-02-08
amwaterhouse
parseResult takes the title as string. usually null
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commitdiff
2006-02-08
amwaterhouse
Make URL input window bigger
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commitdiff
2006-02-08
amwaterhouse
FormatAdapter throws exception
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commitdiff
2006-02-08
amwaterhouse
Check endRes
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commitdiff
2006-02-08
amwaterhouse
Copy dataset annotations for paste(this)
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commitdiff
2006-02-08
amwaterhouse
Colour above or below threshold
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commitdiff
2006-02-08
amwaterhouse
Report invalid chars
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commitdiff
2006-02-03
amwaterhouse
Added graphtype
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commitdiff
2006-02-03
amwaterhouse
Conservation colouring does what it should always have...
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commitdiff
2006-02-03
amwaterhouse
Make java 1.1 compatible
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commitdiff
2006-02-03
amwaterhouse
Slight adjustments
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commitdiff
2006-02-03
amwaterhouse
Fetch sequence(s)
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commitdiff
2006-02-03
amwaterhouse
Java 1.1 compatible
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commitdiff
2006-02-03
amwaterhouse
Many changes
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commitdiff
2006-02-03
amwaterhouse
Save and load graph type
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commitdiff
2006-02-03
amwaterhouse
Max size is 100 for conservation
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commitdiff
2006-02-03
amwaterhouse
Retrieves PFAM alignments
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commitdiff
2006-02-03
amwaterhouse
Slightly bigger for Mac
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commitdiff
2006-02-03
amwaterhouse
Tooltip for multiple graph lines updated
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commitdiff
2006-02-03
amwaterhouse
set index of new annotation
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commitdiff
2006-02-03
amwaterhouse
Allow for non graph annotations in combobox
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commitdiff
2006-02-03
amwaterhouse
Reading features files readded as ref to FeatureRendere...
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commitdiff
2006-02-03
amwaterhouse
has ref to annotation
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commitdiff
2006-02-03
amwaterhouse
Add annotation with sequence ref updated
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commitdiff
2006-02-03
amwaterhouse
Reads annotation files
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commitdiff
2006-02-03
amwaterhouse
Applet draws line graphs
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commitdiff
2006-02-03
amwaterhouse
Applet reads in annotation files
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commitdiff
2006-01-30
amwaterhouse
Cancel button is now close button
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commitdiff
2006-01-30
amwaterhouse
Dont draw origin beyond end of alignment
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commitdiff
2006-01-30
amwaterhouse
No need for apply button, just update colours when...
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commitdiff
2006-01-30
amwaterhouse
Get min and max colour added
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commitdiff
2006-01-30
amwaterhouse
Can be used for annotation colouring
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commitdiff
2006-01-30
amwaterhouse
Faster paint
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commitdiff
2006-01-30
amwaterhouse
Use Antialias flag
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commitdiff
2006-01-30
amwaterhouse
Smooth fonts added
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commitdiff
2006-01-30
amwaterhouse
Null sequence check
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commitdiff
2006-01-30
amwaterhouse
Monospaced indicator
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commitdiff
2006-01-30
amwaterhouse
Unix drag and drop implemented
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commitdiff
2006-01-30
amwaterhouse
GraphGroups added
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commitdiff
2006-01-30
amwaterhouse
Fast paint update
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commitdiff
2006-01-30
amwaterhouse
Anti alias flag
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commitdiff
2006-01-30
amwaterhouse
Drop annotations onto alignment
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commitdiff
2006-01-30
amwaterhouse
Smooth fonts, annotation Colour
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commitdiff
2006-01-30
amwaterhouse
Smooth font option
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commitdiff
2006-01-30
amwaterhouse
AddAnnotation with start index
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commitdiff
2006-01-30
amwaterhouse
New Class
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commitdiff
2006-01-30
amwaterhouse
New files
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commitdiff
2006-01-30
amwaterhouse
Faster painting
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commitdiff
2006-01-30
amwaterhouse
Allow features in overview window
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commitdiff
2006-01-30
amwaterhouse
Allow embedded applet
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commitdiff
2006-01-12
jprocter
PIR file IO now preserves and parses Modeller style...
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commitdiff
2006-01-12
jprocter
DBRefEntry made for sequences retrieved from the PDB
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commitdiff
2006-01-12
jprocter
<No Comment Entered>
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commitdiff
2006-01-12
jprocter
ensured properties are loaded before loggers are initia...
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commitdiff
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