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JAL-3060 entry points for createFeatures, amendFeatures
[jalview.git] / src / jalview /
2018-06-22 gmungocJAL-3030 size split frame taller tree | commitdiff
2018-06-22 hansonrMerge branch 'Jalview-BH/JAL-3026' of https://source... tree | commitdiff
2018-06-22 hansonrfix for no access-control-origin on jalview site tree | commitdiff
2018-06-22 gmungocJAL-3032 more informative failure message tree | commitdiff
2018-06-21 gmungocJAL-3030 allow uncaught exceptions (for easier JS debuggin) tree | commitdiff
2018-06-21 gmungocJAL-3030 try to open a split frame if file and file2... tree | commitdiff
2018-06-21 gmungocJAL-3032 round Quality score for tooltip (as it becomes... tree | commitdiff
2018-06-20 hansonrJAL-3032 for (var var tree | commitdiff
2018-06-20 hansonrSeqCanvas and OverviewCanvas tree | commitdiff
2018-06-20 gmungocJAL-3032 simplified _LoadFileWaitTillLoaded with no... tree | commitdiff
2018-06-20 hansonrJAL-3032 FileLoader fixes for SwingJS tree | commitdiff
2018-06-20 hansonrupdate of javajs package; adds org.apache.harmony,... tree | commitdiff
2018-06-20 hansonrBob first commit JAL-3032 tree | commitdiff
2018-06-20 hansonrMessageManager logger to log4j tree | commitdiff
2018-06-20 gmungocJAL-3032 load properties as "java.properties" tree | commitdiff
2018-06-20 gmungocJAL-3030 suppress change that goes with JAL-3031 tree | commitdiff
2018-06-20 gmungocJAL-3030 reads features file, properties file tree | commitdiff
2018-06-19 gmungocJAL-3030 added menu bar tree | commitdiff
2018-06-19 gmungocJAL-3030 first cut of JalviewJS.main entry point accept... tree | commitdiff
2018-06-07 gmungocJAL-2755 correct Javadoc and error handling tree | commitdiff
2018-06-04 gmungocJAL-3019 correctly form toRange of 'traversed' MapList tree | commitdiff
2018-06-04 gmungocJAL-3018 updated REST versions to 6.3 tree | commitdiff
2018-05-31 gmungocJAL-2808 don't capture or report min-max for mixed... tree | commitdiff
2018-05-31 gmungocJAL-2808 pre-fill numeric inequality filter with min... tree | commitdiff
2018-05-28 gmungocMerge branch 'bug/JAL-797' into develop tree | commitdiff
2018-05-28 gmungocMerge remote-tracking branch 'origin/releases/Release_2... tree | commitdiff
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2992panelHeight' into releases... tree | commitdiff
2018-05-25 Jim ProcterMerge branch 'bug/JAL-1460_dragndropWindows' into relea... tree | commitdiff
2018-05-25 gmungocJAL-2992 simpler heuristic for available height bug/JAL-2992panelHeight tree | commitdiff
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2991_exporttosvgwrapview' into... tree | commitdiff
2018-05-25 Jim ProcterJAL-1460 temp variable for clearer conditional and... bug/JAL-1460_dragndropWindows tree | commitdiff
2018-05-25 Jim ProcterJAL-1460 javadoc tree | commitdiff
2018-05-25 gmungocJAL-2995 tooltip on fields with double-click to browse... tree | commitdiff
2018-05-24 gmungocJAL-2997 additional tests tree | commitdiff
2018-05-24 Jim ProcterJAL-1460 tidied up the use of windows link file parser tree | commitdiff
2018-05-24 Jim ProcterJAL-1460 more complete drag'n'drop debugging info and... tree | commitdiff
2018-05-24 Jim ProcterJAL-1460 process .lnk files dragged to Jalview when... tree | commitdiff
2018-05-24 Jim ProcterJAL-1460 new data flavor for URLs added belt-and-braces... tree | commitdiff
2018-05-23 gmungocJAL-2993 AlignFrame listen for keystrokes in OverviewPanel tree | commitdiff
2018-05-23 Jim Procterfix for JAL-2991 - we could do better :/ bug/JAL-2991_exporttosvgwrapview tree | commitdiff
2018-05-23 gmungocJAL-2997 handle tab-delimited trailing column number... tree | commitdiff
2018-05-21 gmungocJAL-797 Cmd-W act WHEN_IN_FOCUSED_WINDOW bug/JAL-797 tree | commitdiff
2018-05-11 gmungocJAL-2986 corrected findIndex for out of range residue... tree | commitdiff
2018-05-10 Jim ProcterMerge branch 'bug/JAL-2920_uniprotvariantfeature' into... tree | commitdiff
2018-05-10 Jim ProcterJAL-2920 simplified logic and added corner cases for... tree | commitdiff
2018-05-09 gmungocJAL-2984 add pdb as sequence(s) if associate structure... tree | commitdiff
2018-05-09 Jim ProcterMerge branch 'patch/JAL-2976_vaqua4_fallback' into... tree | commitdiff
2018-05-09 Jim ProcterJAL-2976 fixed bad equivalence check and implemented... tree | commitdiff
2018-05-07 Jim ProcterJAL-2321 ensure default is ‘parseImmediately=true’ tree | commitdiff
2018-05-07 Jim ProcterJAL-2321 use configured values for structure derived... tree | commitdiff
2018-05-07 Jim ProcterJAL-2321 add secondary structure & temp factor if not... tree | commitdiff
2018-05-07 Jim ProcterJAL-2321 use StructureImportSettings singleton settings... tree | commitdiff
2018-05-07 Jim ProcterJAL-2321 isParseImmediately() allows the parse() method... tree | commitdiff
2018-05-07 Jim ProcterJAL-2321 allow JmolParser to be configured before parsi... tree | commitdiff
2018-05-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-05-07 Jim ProcterJAL-2906 apply GPLv3 license source tree | commitdiff
2018-05-07 Jim ProcterJAL-2960 don’t override a swing method and create infin... tree | commitdiff
2018-05-04 Jim ProcterMerge branch 'bug/JAL-2899' into releases/Release_2_10_... tree | commitdiff
2018-05-04 Jim ProcterJAL-2976 patch NPE when trying to open Uniprot FTS tree | commitdiff
2018-05-04 Jim ProcterJAL-2948 transfer features/annotation is now available... tree | commitdiff
2018-05-04 Jim ProcterJAL-2960 raise the structure view after adding structur... tree | commitdiff
2018-05-02 Jim ProcterJAL-2976 fallback to Vaqua for Macs that don’t work... tree | commitdiff
2018-05-01 Jim ProcterJAL-2899 colouring moved from SwingWorker to a backgrou... tree | commitdiff
2018-04-30 Jim ProcterMerge branch 'bug/JAL-2899' into releases/Release_2_10_... tree | commitdiff
2018-04-25 Jim ProcterMerge branch 'features/JAL-2944_openStructuresInSelecte... tree | commitdiff
2018-04-24 gmungocJAL-2959 no Print dialog shown if Page Format is Cancelled tree | commitdiff
2018-04-23 gmungocJAL-2954 more efficient SearchResults.markColumns tree | commitdiff
2018-04-18 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-04-18 gmungocJAL-2593 render 'duplicate' features if transparency... tree | commitdiff
2018-04-13 gmungocMerge branch 'features/JAL-2944_openStructuresInSelecte... features/JAL-2944_openStructuresInSelectedView tree | commitdiff
2018-04-12 gmungocJAL-2223 don't add duplicate mappings to StructureSelec... tree | commitdiff
2018-04-12 gmungocJAL-1847 minor post-review updates tree | commitdiff
2018-04-12 gmungocJAL-2944 tidies for review comments tree | commitdiff
2018-04-11 Jim ProcterJAL-2946 catch unexpected SIFTS mapping exceptions... tree | commitdiff
2018-04-09 Jim ProcterJAL-2944 ’new view’ and ‘add to view’ button rather... tree | commitdiff
2018-04-09 Jim ProcterJAL-1847 superpose checkbox in structure chooser tree | commitdiff
2018-04-09 Jim ProcterJAL-1847 JAL-2944 make superposition step a configurabl... tree | commitdiff
2018-04-05 Jim ProcterJAL-2945 resolve model as PDB file. Need to verify... tree | commitdiff
2018-04-05 Jim ProcterJAL-2945 provide access to last highlighted results tree | commitdiff
2018-04-05 Jim ProcterJAL-2944 open selected structures in existing or a... tree | commitdiff
2018-04-05 Jim ProcterJAL-2944 combo box to pick which viewer to load structu... tree | commitdiff
2018-04-05 Jim ProcterJAL-2944 methods to check existence and get a title... tree | commitdiff
2018-04-05 Jim ProcterJAL-2944 allow StructureViewer proxy to be created... tree | commitdiff
2018-04-05 Jim ProcterJAL-2944 get viewer’s title via toString() tree | commitdiff
2018-04-05 Jim ProcterJAL-2944 expose UI update methods in api tree | commitdiff
2018-04-05 Jim ProcterJAL-2944 remove modal prompt logic and expose methods... tree | commitdiff
2018-04-05 Jim ProcterJAL-2944 pull up structure viewer discovery routine... tree | commitdiff
2018-03-22 gmungocJAL-2929 unit test, tidy unused/unneeded fields/parameters tree | commitdiff
2018-03-21 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-03-21 Jim ProcterMerge branch 'patch/JAL-2754_patch2104forJava8' into... tree | commitdiff
2018-03-21 Jim ProcterJAL-2754 fix eclipse compilation error about referencin... tree | commitdiff
2018-03-21 gmungocJAL-2929 use configure Overview gap colour instead... tree | commitdiff
2018-03-16 gmungocJAL-2679 getGeneId() now uses the same pattern as getGe... tree | commitdiff
2018-03-16 gmungocMerge remote-tracking branch 'origin/releases/Release_2... tree | commitdiff
2018-03-16 gmungocJAL-2922 update FeatureRenderer and repaint feature... tree | commitdiff
2018-03-16 gmungocMerge branch 'bug/JAL-2865removeGC' into develop tree | commitdiff
2018-03-15 gmungocJAL-2893 enabling Get Crossreferences to ENSEMBLGENOMES tree | commitdiff
2018-03-14 gmungocJAL-2893 include ENSEMBLGENOMES as a 'roundtrip db... tree | commitdiff
2018-03-14 gmungocJAL-2679 reinstating changes lost in VCF merge tree | commitdiff
2018-03-14 gmungocJAL-2679 reinstating changes lost in VCF merge tree | commitdiff
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