fixes bug 0013013 but reveals lack of a 'features retrieved' flag that should be...
[jalview.git] / src / jalview /
2006-02-03 amwaterhouseMax size is 100 for conservation
2006-02-03 amwaterhouseRetrieves PFAM alignments
2006-02-03 amwaterhouseSlightly bigger for Mac
2006-02-03 amwaterhouseTooltip for multiple graph lines updated
2006-02-03 amwaterhouseset index of new annotation
2006-02-03 amwaterhouseAllow for non graph annotations in combobox
2006-02-03 amwaterhouseReading features files readded as ref to FeatureRendere...
2006-02-03 amwaterhousehas ref to annotation
2006-02-03 amwaterhouseAdd annotation with sequence ref updated
2006-02-03 amwaterhouseReads annotation files
2006-02-03 amwaterhouseApplet draws line graphs
2006-02-03 amwaterhouseApplet reads in annotation files
2006-01-30 amwaterhouseCancel button is now close button
2006-01-30 amwaterhouseDont draw origin beyond end of alignment
2006-01-30 amwaterhouseNo need for apply button, just update colours when...
2006-01-30 amwaterhouseGet min and max colour added
2006-01-30 amwaterhouseCan be used for annotation colouring
2006-01-30 amwaterhouseFaster paint
2006-01-30 amwaterhouseUse Antialias flag
2006-01-30 amwaterhouseSmooth fonts added
2006-01-30 amwaterhouseNull sequence check
2006-01-30 amwaterhouseMonospaced indicator
2006-01-30 amwaterhouseUnix drag and drop implemented
2006-01-30 amwaterhouseGraphGroups added
2006-01-30 amwaterhouseFast paint update
2006-01-30 amwaterhouseAnti alias flag
2006-01-30 amwaterhouseDrop annotations onto alignment
2006-01-30 amwaterhouseSmooth fonts, annotation Colour
2006-01-30 amwaterhouseSmooth font option
2006-01-30 amwaterhouseAddAnnotation with start index
2006-01-30 amwaterhouseNew Class
2006-01-30 amwaterhouseNew files
2006-01-30 amwaterhouseFaster painting
2006-01-30 amwaterhouseAllow features in overview window
2006-01-30 amwaterhouseAllow embedded applet
2006-01-12 jprocterPIR file IO now preserves and parses Modeller style...
2006-01-12 jprocterDBRefEntry made for sequences retrieved from the PDB
2006-01-12 jprocter<No Comment Entered>
2006-01-12 jprocterensured properties are loaded before loggers are initia...
2006-01-11 jprocterrefactored Alignframe padGaps code to Alignment and...
2005-12-22 amwaterhouseCheck for null StringBuffer in getPDB
2005-12-22 amwaterhouseCheck for null StringBuffer in getPDB
2005-12-22 amwaterhouseReduced jar size by 20%
2005-12-22 amwaterhouseAllow embedded applet
2005-12-22 amwaterhousegraph now has type, not a boolean
2005-12-22 amwaterhouseWatch for trim left/right null widths
2005-12-22 amwaterhouseREGEX CANNOT BE STATIC
2005-12-22 amwaterhouseWrapped search scrolls to visible result
2005-12-22 amwaterhouseRemove import
2005-12-22 amwaterhouseAnnotations.Graph can be bargraph, linegraph
2005-12-22 amwaterhouseRemove printPoints
2005-12-22 amwaterhouseRemove main method
2005-12-22 amwaterhouseLoad assocated tree
2005-12-16 jprocterTodo notes for feature issue: 0011711
2005-12-15 amwaterhousePrevents confusing extra line being output in Java...
2005-12-15 amwaterhouseSetMenuBar(null) when closing frames. Prevents a bug...
2005-12-12 amwaterhouseGetAlignment uses active alignment window
2005-12-12 amwaterhouseChange dataset name
2005-12-12 amwaterhouseChange title
2005-12-12 amwaterhouseJbinit
2005-12-12 amwaterhouseFont size label
2005-12-12 amwaterhouseDont bother with WSWUBlast for now
2005-12-12 amwaterhouseFOnt size -3 for labels
2005-12-12 amwaterhouse Check if user cancelled before making image
2005-12-12 amwaterhouseSet font italic
2005-12-12 amwaterhouseFont changes on export png/eps
2005-12-12 amwaterhouseGetmask is slightly wider
2005-12-09 jprocterfixed pdbentry creation and multiple uniprot or pdb...
2005-12-09 amwaterhouseChange order of repaint if wrapped
2005-12-09 amwaterhouseApplet Structure viewer has all colours available
2005-12-09 amwaterhouseCan be used by PDBViewer
2005-12-09 amwaterhouseOnly load the tree file once, for first alignment
2005-12-09 amwaterhouseKeylistener added to frame and seqcanvas
2005-12-08 jproctercontext dependent title for when called from desktop...
2005-12-08 amwaterhouseIf dataset seq exists for paste to existing alignment...
2005-12-08 jprocteradded some error checking and instruction dialogs
2005-12-08 amwaterhouseShould call deselectAll when escape pressed
2005-12-08 amwaterhouseDont repaint if component has been removed
2005-12-08 jproctermodified jnet parsing exception report string.
2005-12-08 jprocterexception checks for (de)uniquify
2005-12-08 amwaterhouseUnknownSequences.remove moved out of loop
2005-12-08 amwaterhouseshowAnnotation state loaded
2005-12-08 amwaterhousenull pointer in wrapped mode, click near sequence
2005-12-08 amwaterhouseAfter merge
2005-12-07 amwaterhouseLicense added to new files
2005-12-06 amwaterhouseSlightly larger
2005-12-06 amwaterhouseAllow for DNA alignments in imgMap
2005-12-06 amwaterhouseMake ImageMap for features as well as groups
2005-12-06 amwaterhouseAdd features to dataset
2005-12-06 amwaterhouseAdd internalFrameActivated listener
2005-12-06 amwaterhousehasDistances added
2005-12-06 amwaterhouseAfter merge
2005-12-06 amwaterhouseafter merge
2005-12-06 amwaterhouseafter merge
2005-12-06 amwaterhouseAfter merge
2005-11-18 jprocterFixed bug dragonfly.compbio.dundee.ac.uk/mantis/view...
2005-11-18 jprocteradded 3 letter IUB codes for ambiguous residues/bases
2005-10-07 amwaterhousecomma separated rgb values
2005-10-07 amwaterhousegetalignment method added
2005-10-07 amwaterhouseQuick fix for reading sequence
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