2006-07-07 |
amwaterhouse | SelectionGroup is initially null |
tree | commitdiff |
2006-07-07 |
amwaterhouse | Replaced by AnnotationFile |
tree | commitdiff |
2006-06-23 |
amwaterhouse | Uniprot may have several accession ids |
tree | commitdiff |
2006-06-23 |
amwaterhouse | Parse HTML links from jalview features file |
tree | commitdiff |
2006-06-23 |
amwaterhouse | DBRefFetcher replaces SequenceFeatureFetcher |
tree | commitdiff |
2006-06-23 |
amwaterhouse | Check if featuresDisplayed is null |
tree | commitdiff |
2006-06-23 |
amwaterhouse | Case wrapped jar file, wrapped preference true dealt... |
tree | commitdiff |
2006-06-23 |
amwaterhouse | No need for repaint |
tree | commitdiff |
2006-06-23 |
amwaterhouse | Uses FeaturesFile parser, GFF and Jalview |
tree | commitdiff |
2006-06-22 |
amwaterhouse | Check featureLinks is not null |
tree | commitdiff |
2006-06-22 |
amwaterhouse | ParseFeaturesFile takes protocol as arg |
tree | commitdiff |
2006-06-22 |
amwaterhouse | Takes AlignFrame as arg, to update progressbar |
tree | commitdiff |
2006-06-22 |
amwaterhouse | AlignFrame is now the FeatureListener |
tree | commitdiff |
2006-06-22 |
amwaterhouse | Fetch DBRefs |
tree | commitdiff |
2006-06-22 |
amwaterhouse | Ye olde SequenceFeatureFetcher |
tree | commitdiff |
2006-06-22 |
amwaterhouse | Renamed to DBRefFetcher |
tree | commitdiff |
2006-06-15 |
amwaterhouse | Use spice-3d das1 source list for nowjalview/gui/DasSou... |
tree | commitdiff |
2006-06-15 |
amwaterhouse | Fixed to trial registry at the moment |
tree | commitdiff |
2006-06-15 |
amwaterhouse | Not using AxisDasRegistry |
tree | commitdiff |
2006-06-15 |
amwaterhouse | check helperUrl is not null |
tree | commitdiff |
2006-06-15 |
amwaterhouse | Correction - use start and end |
tree | commitdiff |
2006-06-15 |
amwaterhouse | Dont add start and end for the moment |
tree | commitdiff |
2006-06-15 |
amwaterhouse | Wrap alignment moved to alignFrame |
tree | commitdiff |
2006-06-15 |
amwaterhouse | Non positional features shown as mouse over |
tree | commitdiff |
2006-06-15 |
amwaterhouse | fr.findAllFeatures on init |
tree | commitdiff |
2006-06-15 |
amwaterhouse | Correct citation |
tree | commitdiff |
2006-06-15 |
amwaterhouse | Unnecessary import |
tree | commitdiff |
2006-06-15 |
amwaterhouse | FeatureRenderer synchronized featuresAdded method |
tree | commitdiff |
2006-06-15 |
amwaterhouse | Maintain status and position only for uniprot parsing |
tree | commitdiff |
2006-06-14 |
amwaterhouse | Fileloading progressbar |
tree | commitdiff |
2006-06-14 |
amwaterhouse | Status is now in otherData of feature |
tree | commitdiff |
2006-06-14 |
amwaterhouse | Sequence checks for duplicate features |
tree | commitdiff |
2006-06-14 |
amwaterhouse | parseAppletParam |
tree | commitdiff |
2006-06-14 |
amwaterhouse | parseAppletParameter |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Retrieve multiple EMBL ids |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Size adjustments for MacOSX |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Remove unnecessary lines |
tree | commitdiff |
2006-06-09 |
amwaterhouse | createColourFromName if not specified |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Export annotations as Jalview format |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Feature and annotation parsing moved to io |
tree | commitdiff |
2006-06-09 |
amwaterhouse | otherDetails |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Remove getsfarray |
tree | commitdiff |
2006-06-09 |
amwaterhouse | getSequencesArray |
tree | commitdiff |
2006-06-09 |
amwaterhouse | setAcceptAllFileFilter fixes bug on MacOSX |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Export features / annotations |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Save text to file |
tree | commitdiff |
2006-06-09 |
amwaterhouse | createColourFromName |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Function not used |
tree | commitdiff |
2006-06-09 |
amwaterhouse | readAnnotationFile |
tree | commitdiff |
2006-06-09 |
amwaterhouse | parseFeaturesFile |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Annotation/feature exporter |
tree | commitdiff |
2006-06-08 |
jprocter | Introduced DbRefEntry to DasSourceCoordinateSystem... |
tree | commitdiff |
2006-06-08 |
jprocter | DBRefEntry.source enum type |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Wrap alignment added to preferences |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Checks in case DasSource is null |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Remove unnecessary ints |
tree | commitdiff |
2006-06-07 |
amwaterhouse | DAS sources added |
tree | commitdiff |
2006-06-07 |
amwaterhouse | PopupMenu displays URL links |
tree | commitdiff |
2006-06-07 |
amwaterhouse | ignore begin==0 and end==0 for the moment |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Create random colour only if Colour is not specified |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Implements FeatureListener |
tree | commitdiff |
2006-06-07 |
amwaterhouse | new DasSequenceFetcher |
tree | commitdiff |
2006-06-07 |
amwaterhouse | DAS Settings tab added |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Use a label with html instead of textarea |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Remove position, add score and links |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Parameter to show feature settings |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Tooltips for features, links for features added |
tree | commitdiff |
2006-06-07 |
amwaterhouse | NEW FILES |
tree | commitdiff |
2006-05-18 |
jprocter | added future method comment |
tree | commitdiff |
2006-05-17 |
jprocter | added the jnetfile parameter to specify a JNet concise... |
tree | commitdiff |
2006-05-17 |
jprocter | added unofficial support for concise output parsing... |
tree | commitdiff |
2006-05-17 |
jprocter | refactored code for creating JNet annotations |
tree | commitdiff |
2006-05-17 |
jprocter | Refactored code for creating annotation objects from... |
tree | commitdiff |
2006-05-17 |
amwaterhouse | Restrict annotation panel to 50% window on load |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Save annotation colours, hideConsevation etc, graphGroups |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Switch off dashedline after drawing groups |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Remove unwanted line |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Allow for scroller position |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Remove system.out |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Rearrange annotations |
tree | commitdiff |
2006-05-16 |
jprocter | added popup warning when proxy settings must be configured. |
tree | commitdiff |
2006-05-15 |
amwaterhouse | Monospaced font not allowed if charWidth stretched |
tree | commitdiff |
2006-05-15 |
amwaterhouse | Brackets around orgin calculation |
tree | commitdiff |
2006-05-15 |
amwaterhouse | All or nothing drawing display char |
tree | commitdiff |
2006-05-15 |
amwaterhouse | EPS font width is a double, check this for monospacedFont |
tree | commitdiff |
2006-05-15 |
amwaterhouse | If headless, get the width of Jalview wrapped window... |
tree | commitdiff |
2006-05-12 |
jprocter | rearranged discoverer to dynamically update on demand |
tree | commitdiff |
2006-05-12 |
amwaterhouse | returns to zero degrees when stopped |
tree | commitdiff |
2006-05-12 |
amwaterhouse | pass viewport to fileloader, as we need to fireproperty... |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Slight mod url chooser for Mac users |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Remove commented line |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Slightly smaller recent panel |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Maintain numbering if remove left is undone |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Typo |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Invert selection |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Recently loaded files, urls, append sequences to Alignment |
tree | commitdiff |
2006-05-10 |
amwaterhouse | Correction for sequences with start not equal to 1 |
tree | commitdiff |
2006-05-10 |
amwaterhouse | Copy and paste of annotations with seqrefs |
tree | commitdiff |
2006-05-10 |
amwaterhouse | implements ClipboardOwner |
tree | commitdiff |
2006-05-10 |
amwaterhouse | saves and loads annotations with seqrefs |
tree | commitdiff |
next |