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JAL-3609 HiDPI scale setting done via system prop in getdown or halview.bin.Launcher
[jalview.git] / src / jalview /
2019-03-01 gmungocMerge branch 'feature/JAL-3093wrappedModeTooltips'... tree | commitdiff
2019-03-01 gmungocMerge branch 'feature/JAL-1244stretchStatusMsg' into... tree | commitdiff
2019-03-01 gmungocMerge branch 'bug/JAL-3139colocatedFeatures' into develop tree | commitdiff
2019-03-01 gmungocJAL-3154 disable reorder columns before adding to viewport tree | commitdiff
2019-03-01 gmungocMerge branch 'bug/JAL-3154tableColumnDrag' into develop tree | commitdiff
2019-03-01 gmungocMerge branch 'bug/JAL-3161annotationTooltipRange' into... tree | commitdiff
2019-03-01 gmungocMerge branch 'bug/JAL-3158selectionBroadcasts' into... tree | commitdiff
2019-03-01 gmungocMerge branch 'bug/JAL-3164complementOverview' into... tree | commitdiff
2019-03-01 gmungocMerge branch 'merge/JAL-3140' into develop tree | commitdiff
2019-03-01 gmungocJAL-3140 update for change to SequenceI api tree | commitdiff
2019-03-01 gmungocMerge branch 'feature/intervalStoreJ' into merge/JAL... tree | commitdiff
2019-03-01 gmungocJAL-3140 reduced coupling to intervalstore.jar feature/intervalStoreJ tree | commitdiff
2019-02-28 gmungocJAL-3140 confine intervalstore imports to jalview.datam... tree | commitdiff
2019-02-28 gmungocMerge branch 'bug/JAL-2420revealAllMenu' into develop tree | commitdiff
2019-02-28 gmungocMerge branch 'bug/JAL-3166npeAllRowsHidden' into develop tree | commitdiff
2019-02-28 gmungocMerge branch 'feature/JAL-3169cancelOverwrite' into... tree | commitdiff
2019-02-28 gmungocMerge branch 'feature/JAL-3143ensemblJSON' into merge... tree | commitdiff
2019-02-28 gmungocMerge remote-tracking branch 'origin/feature/JAL-3141_b... tree | commitdiff
2019-02-28 Jim ProcterMerge branch 'feature/JAL-3141_backupfiles_for211'... merge/develop_feature/JAL-3141_backupfiles_for211 tree | commitdiff
2019-02-27 gmungocJAL-2527 default Overview 'hide hidden' i.e. WYSIWYG tree | commitdiff
2019-02-26 gmungocJAL-3201 JAL-2386 don't pre-select 'apply to all groups' tree | commitdiff
2019-02-26 gmungocJAL-3201 group colour schemes distinct instances tree | commitdiff
2019-02-25 gmungocJAL-3200 fast lookup of DSSP3 notation tree | commitdiff
2019-02-24 gmungocJAL-3198 don't recalculate group conservation for Id... tree | commitdiff
2019-02-24 gmungocJAL-3198 SequenceGroup 'bulk constructor' without dupli... tree | commitdiff
2019-02-22 gmungocJAL-2915 don't recalculate Overview on scroll to positi... tree | commitdiff
2019-02-22 gmungocJAL-2738 don't set AF as feature score tree | commitdiff
2019-02-22 Ben SoaresJAL-3141 improved message for asking whether to delete... tree | commitdiff
2019-02-21 Ben SoaresJAL-3141 Sensible refactoring for confirming deleting... tree | commitdiff
2019-02-21 gmungocJAL-3187 handle no mapping / complement features withou... tree | commitdiff
2019-02-20 gmungocMerge branch 'feature/JAL-3143ensemblJSON' into feature... tree | commitdiff
2019-02-20 gmungocJAL-3187 read peptide variant from CSQ:HGVSp if present... tree | commitdiff
2019-02-19 gmungocJAL-3187 hacks to get peptide variant in to Jmol hover... tree | commitdiff
2019-02-18 gmungocJAL-3187 reset ViewStyle on Cancel in FeatureSettings tree | commitdiff
2019-02-18 gmungocJAL-3187 'on top' optional for complementary features tree | commitdiff
2019-02-17 Ben SoaresJAL-3141 User warning when deleting old backup files... tree | commitdiff
2019-02-15 Ben SoaresJAL-3141 re-order deletion of old files and check lastM... tree | commitdiff
2019-02-15 gmungocJAL-3010 getColumnClass() never return null tree | commitdiff
2019-02-14 Ben SoaresJAL-3141 Added warning/confirmation when suffixReverse... tree | commitdiff
2019-02-14 Ben SoaresJAL-3141 Moved 'Previously saved scheme' combo box... tree | commitdiff
2019-02-01 Ben SoaresJAL-3141 Slight efficiency gain in detecting backupfile... tree | commitdiff
2019-01-30 Ben SoaresJAL-3141 Enabled the 'Include backpup files' checkbox... tree | commitdiff
2019-01-29 Ben SoaresJAL-3141 Found a good fix for updating the FileChooser... tree | commitdiff
2019-01-29 Ben SoaresJAL-3141 Found a (not ideal) fix for updating the FileC... tree | commitdiff
2019-01-29 gmungocJAL-3143 format alleles array for feature description tree | commitdiff
2019-01-28 Ben SoaresJAL-3141 improvement on BackupFilenameParts filename... tree | commitdiff
2019-01-25 Ben SoaresJAL-3141. This adds quite a lot of code to allow an... tree | commitdiff
2019-01-25 gmungocJAL-3187 return a colour for linked features with trans... tree | commitdiff
2019-01-25 gmungocJAL-3187 set initial state of checkbox from viewport tree | commitdiff
2019-01-25 gmungocJAL-3187 don't compute variant features on peptide... tree | commitdiff
2019-01-24 Ben SoaresJAL-3141 Added a '.fa' to filename examples tree | commitdiff
2019-01-24 Ben SoaresJAL-3141 Change of label tree | commitdiff
2019-01-24 Ben SoaresJAL-3141 Removed border around example filenames in... tree | commitdiff
2019-01-24 Ben SoaresJAL-3141 New layout and wording of Backups Preferences... tree | commitdiff
2019-01-24 gmungocJAL-3018 Ensembl version updated to 9.0 tree | commitdiff
2019-01-24 Ben SoaresJAL-3141 Reformatted code in eclipse tree | commitdiff
2019-01-23 Ben SoaresJAL-3141 Added Presets options in the Backups Preferenc... tree | commitdiff
2019-01-23 gmungocJAL-3187 fix out by one feature on structure position tree | commitdiff
2019-01-23 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-01-23 gmungocJAL-3063 correct handling of absent choice element... tree | commitdiff
2019-01-22 gmungocJAL-3187 clunky sort by renderorder in findComplementFe... tree | commitdiff
2019-01-22 Ben SoaresJAL-3141 Fixed what happens when suffix template has... tree | commitdiff
2019-01-21 Ben SoaresJAL-3141 Rejigged the Preferences tab and changed some... tree | commitdiff
2019-01-21 gmungocJAL-3187 also repaint complement on change in FeatureTy... tree | commitdiff
2019-01-21 gmungocJAL-3187 draw complement features on alignment / structure tree | commitdiff
2019-01-21 gmungocJAL-3187 unit tests updated and errors caught tree | commitdiff
2019-01-21 gmungocJAL-3187 findFeaturesAtResidue answer in render order... tree | commitdiff
2019-01-21 gmungocJAL-3187 repaint a 'following' complementary view on... tree | commitdiff
2019-01-21 gmungocJAL-3187 (hacked up) show complement features on struct... tree | commitdiff
2019-01-20 Ben SoaresJAL-3141 removing diagnostic output tree | commitdiff
2019-01-20 Ben SoaresJAL-3141 Fixed example filenames in Preferences pane... tree | commitdiff
2019-01-20 Ben SoaresJAL-3141 Changed suffix position to after the extension... tree | commitdiff
2019-01-20 Ben SoaresJAL-3141 Re-added some changes in Jalview2XML missed... tree | commitdiff
2019-01-18 gmungocJAL-3187 basic first version for tooltips only (renderi... tree | commitdiff
2019-01-18 Jim ProcterMerge branch 'feature/JAL-3063jaxbNoCastor' into featur... tree | commitdiff
2019-01-18 Jim ProcterMerge branch 'develop' into feature/JAL-3063jaxbNoCastor tree | commitdiff
2019-01-18 gmungocJAL-3143 'id' not 'ID' attribute drives generation... tree | commitdiff
2019-01-17 Jim ProcterJAL-3116 clear out whitespace when materialising Sequen... tree | commitdiff
2019-01-16 Ben SoaresJAL-3141 Remove no longer used exampleLabel tree | commitdiff
2019-01-16 Jim ProcterMerge branch 'feature/JAL-3063jaxbNoCastor' into develop tree | commitdiff
2019-01-16 Jim ProcterMerge branch 'features/pca_jaxb_datasetrefs_JAL-3171_JA... tree | commitdiff
2019-01-15 Jim ProcterJAL-1767 refactor associated view logic to public metho... tree | commitdiff
2019-01-14 Ben SoaresJAL-3141 Forgot this file, sorry! tree | commitdiff
2019-01-14 Ben SoaresJAL-3141 Added a 'Save Project as...' File menu item... tree | commitdiff
2019-01-14 Ben SoaresJAL-3141 Made more constants tree | commitdiff
2019-01-14 gmungocJAL-3186 remove Variable Colour from popup menu tree | commitdiff
2019-01-14 gmungocJAL-2069 wider dialog so all fields show! tree | commitdiff
2019-01-14 gmungocJAL-2069 clear any error colour when setting threshold... tree | commitdiff
2019-01-14 gmungocJAL-3125 tidy up tree | commitdiff
2019-01-14 gmungocJAL-3125 avoid slider 'rounding' threshold field value tree | commitdiff
2019-01-09 Ben SoaresJAL-3141 removed redundant method to tests tree | commitdiff
2019-01-09 Jim ProcterMerge branch 'feature/JAL-3063JAXB' into features/pca_j... tree | commitdiff
2019-01-09 Jim ProcterMerge branch 'feature/JAL-3063JAXB' into feature/JAL... tree | commitdiff
2019-01-09 Jim ProcterJAL-3063 remove stale JAXB binding POJO tree | commitdiff
2019-01-09 Ben SoaresJAL-3141 Added i18n for the example filenames in Prefer... tree | commitdiff
2019-01-09 Ben SoaresJAL-3141 forgot to add this file after extracting the... tree | commitdiff
2019-01-09 Ben SoaresJAL-3141 Made one more suggested change from code review tree | commitdiff
2019-01-08 Ben SoaresJAL-3141 Made some more suggested changes from code... tree | commitdiff
2019-01-08 Ben SoaresJAL-3141 Made some suggested changes from code review tree | commitdiff
2019-01-08 gmungocJAL-3180 Disabled 'By Annotation' group colour menu... feature/JAL-3180colourAnnotationMenu tree | commitdiff
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