2006-06-15 |
amwaterhouse | Maintain status and position only for uniprot parsing |
tree | commitdiff |
2006-06-14 |
amwaterhouse | Fileloading progressbar |
tree | commitdiff |
2006-06-14 |
amwaterhouse | Status is now in otherData of feature |
tree | commitdiff |
2006-06-14 |
amwaterhouse | Sequence checks for duplicate features |
tree | commitdiff |
2006-06-14 |
amwaterhouse | parseAppletParam |
tree | commitdiff |
2006-06-14 |
amwaterhouse | parseAppletParameter |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Retrieve multiple EMBL ids |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Size adjustments for MacOSX |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Remove unnecessary lines |
tree | commitdiff |
2006-06-09 |
amwaterhouse | createColourFromName if not specified |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Export annotations as Jalview format |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Feature and annotation parsing moved to io |
tree | commitdiff |
2006-06-09 |
amwaterhouse | otherDetails |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Remove getsfarray |
tree | commitdiff |
2006-06-09 |
amwaterhouse | getSequencesArray |
tree | commitdiff |
2006-06-09 |
amwaterhouse | setAcceptAllFileFilter fixes bug on MacOSX |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Export features / annotations |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Save text to file |
tree | commitdiff |
2006-06-09 |
amwaterhouse | createColourFromName |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Function not used |
tree | commitdiff |
2006-06-09 |
amwaterhouse | readAnnotationFile |
tree | commitdiff |
2006-06-09 |
amwaterhouse | parseFeaturesFile |
tree | commitdiff |
2006-06-09 |
amwaterhouse | Annotation/feature exporter |
tree | commitdiff |
2006-06-08 |
jprocter | Introduced DbRefEntry to DasSourceCoordinateSystem... |
tree | commitdiff |
2006-06-08 |
jprocter | DBRefEntry.source enum type |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Wrap alignment added to preferences |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Checks in case DasSource is null |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Remove unnecessary ints |
tree | commitdiff |
2006-06-07 |
amwaterhouse | DAS sources added |
tree | commitdiff |
2006-06-07 |
amwaterhouse | PopupMenu displays URL links |
tree | commitdiff |
2006-06-07 |
amwaterhouse | ignore begin==0 and end==0 for the moment |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Create random colour only if Colour is not specified |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Implements FeatureListener |
tree | commitdiff |
2006-06-07 |
amwaterhouse | new DasSequenceFetcher |
tree | commitdiff |
2006-06-07 |
amwaterhouse | DAS Settings tab added |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Use a label with html instead of textarea |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Remove position, add score and links |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Parameter to show feature settings |
tree | commitdiff |
2006-06-07 |
amwaterhouse | Tooltips for features, links for features added |
tree | commitdiff |
2006-06-07 |
amwaterhouse | NEW FILES |
tree | commitdiff |
2006-05-18 |
jprocter | added future method comment |
tree | commitdiff |
2006-05-17 |
jprocter | added the jnetfile parameter to specify a JNet concise... |
tree | commitdiff |
2006-05-17 |
jprocter | added unofficial support for concise output parsing... |
tree | commitdiff |
2006-05-17 |
jprocter | refactored code for creating JNet annotations |
tree | commitdiff |
2006-05-17 |
jprocter | Refactored code for creating annotation objects from... |
tree | commitdiff |
2006-05-17 |
amwaterhouse | Restrict annotation panel to 50% window on load |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Save annotation colours, hideConsevation etc, graphGroups |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Switch off dashedline after drawing groups |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Remove unwanted line |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Allow for scroller position |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Remove system.out |
tree | commitdiff |
2006-05-16 |
amwaterhouse | Rearrange annotations |
tree | commitdiff |
2006-05-16 |
jprocter | added popup warning when proxy settings must be configured. |
tree | commitdiff |
2006-05-15 |
amwaterhouse | Monospaced font not allowed if charWidth stretched |
tree | commitdiff |
2006-05-15 |
amwaterhouse | Brackets around orgin calculation |
tree | commitdiff |
2006-05-15 |
amwaterhouse | All or nothing drawing display char |
tree | commitdiff |
2006-05-15 |
amwaterhouse | EPS font width is a double, check this for monospacedFont |
tree | commitdiff |
2006-05-15 |
amwaterhouse | If headless, get the width of Jalview wrapped window... |
tree | commitdiff |
2006-05-12 |
jprocter | rearranged discoverer to dynamically update on demand |
tree | commitdiff |
2006-05-12 |
amwaterhouse | returns to zero degrees when stopped |
tree | commitdiff |
2006-05-12 |
amwaterhouse | pass viewport to fileloader, as we need to fireproperty... |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Slight mod url chooser for Mac users |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Remove commented line |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Slightly smaller recent panel |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Maintain numbering if remove left is undone |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Typo |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Invert selection |
tree | commitdiff |
2006-05-11 |
amwaterhouse | Recently loaded files, urls, append sequences to Alignment |
tree | commitdiff |
2006-05-10 |
amwaterhouse | Correction for sequences with start not equal to 1 |
tree | commitdiff |
2006-05-10 |
amwaterhouse | Copy and paste of annotations with seqrefs |
tree | commitdiff |
2006-05-10 |
amwaterhouse | implements ClipboardOwner |
tree | commitdiff |
2006-05-10 |
amwaterhouse | saves and loads annotations with seqrefs |
tree | commitdiff |
2006-05-10 |
amwaterhouse | Draw an offscreen Image |
tree | commitdiff |
2006-05-10 |
amwaterhouse | Annotations must createSequenceMapping if seqRef not... |
tree | commitdiff |
2006-05-10 |
amwaterhouse | Create sequence mapping for annotations |
tree | commitdiff |
2006-05-10 |
amwaterhouse | addAnnotation with seqRef |
tree | commitdiff |
2006-05-10 |
amwaterhouse | Changes case to end of alignment |
tree | commitdiff |
2006-05-10 |
amwaterhouse | remove import |
tree | commitdiff |
2006-05-10 |
amwaterhouse | Save seqref with annotations |
tree | commitdiff |
2006-05-02 |
amwaterhouse | Make nullFrame only once |
tree | commitdiff |
2006-05-02 |
amwaterhouse | Remove unnecessary panel, also nullFrame created only... |
tree | commitdiff |
2006-05-02 |
amwaterhouse | Middle mouse to compress alignment |
tree | commitdiff |
2006-05-02 |
amwaterhouse | Check that fontsize > 0 |
tree | commitdiff |
2006-05-02 |
amwaterhouse | Toggle Case added |
tree | commitdiff |
2006-05-02 |
amwaterhouse | Toggle case added to popup menu |
tree | commitdiff |
2006-05-01 |
amwaterhouse | Remove edit menu if no group defined |
tree | commitdiff |
2006-05-01 |
amwaterhouse | Maintain original transparency setting |
tree | commitdiff |
2006-05-01 |
amwaterhouse | Change name to editMenu |
tree | commitdiff |
2006-05-01 |
amwaterhouse | If Mac, use the fillRoundRect method |
tree | commitdiff |
2006-05-01 |
amwaterhouse | Forces init of alignPanel if annotations added |
tree | commitdiff |
2006-05-01 |
amwaterhouse | Fixes redraw top of group bug |
tree | commitdiff |
2006-05-01 |
amwaterhouse | If no group, hide menu |
tree | commitdiff |
2006-05-01 |
amwaterhouse | If mac, use the fillRoundRect |
tree | commitdiff |
2006-05-01 |
amwaterhouse | java 1.1 compatibility |
tree | commitdiff |
2006-04-28 |
amwaterhouse | Helix sizes |
tree | commitdiff |
2006-04-28 |
amwaterhouse | Make sure end is less than sequence width |
tree | commitdiff |
2006-04-28 |
amwaterhouse | Group width -1 |
tree | commitdiff |
2006-04-28 |
amwaterhouse | Watch for exceeding width limit |
tree | commitdiff |
2006-04-28 |
amwaterhouse | If autoCalculate selected, recalculate immediately |
tree | commitdiff |
2006-04-28 |
amwaterhouse | Back to gray line |
tree | commitdiff |
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