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JAL-2822 JAL-2684 only create dataset seq for an edit as needed, adjust start/end...
[jalview.git]
/
src
/
jalview
/
2017-08-22
Jim Procter
JAL-1551 formatting
tree
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commitdiff
2017-08-22
Jim Procter
JAL-2681 canonicalise DB source before fetching to...
tree
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commitdiff
2017-08-22
Jim Procter
JAL-2681 formatting
tree
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commitdiff
2017-08-22
gmungoc
JAL-2609 tiny tidy
features/JAL-2609fastPaintWrapped
tree
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commitdiff
2017-08-22
gmungoc
JAL-2609 corrections for print wrapped view
tree
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commitdiff
2017-08-22
gmungoc
JAL-2609 tweaks to, and tests for, calculateWrappedGeometry
tree
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commitdiff
2017-08-21
gmungoc
JAL-2609 tweaks including fully erasing scale above
tree
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commitdiff
2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2609fastPaintW...
tree
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commitdiff
2017-08-21
Jim Procter
JAL-2588 don’t test char==gap until we know the shader...
feature/2588
tree
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commitdiff
2017-08-21
Jim Procter
JAL-2588 field on overview colour finder for default...
tree
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commitdiff
2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-2446NCList
tree
|
commitdiff
2017-08-18
Jim Procter
Merge branch 'feature/2588' into merge/develop_feature...
tree
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commitdiff
2017-08-18
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-08-18
kiramt
JAL-2664 Adjusted colour of hidden cols/seqs
tree
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commitdiff
2017-08-18
kiramt
JAL-2664 Correct colouring for rows
tree
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commitdiff
2017-08-18
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-08-18
kiramt
JAL-2665 Comments
tree
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commitdiff
2017-08-18
kiramt
JAL-2665 Refactoring (and side-effect fix for JAL-2672)
tree
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commitdiff
2017-08-18
kiramt
JAL-2665 tidies
tree
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commitdiff
2017-08-17
kiramt
JAL-2665 Code tidies
tree
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commitdiff
2017-08-17
kiramt
JAL-2665 Fixed wrapped mode group over >1 panel; and...
tree
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commitdiff
2017-08-17
kiramt
JAL-2665 partial fix for selection running over 2 wrapp...
tree
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commitdiff
2017-08-17
kiramt
JAL-2665 Correct position of selection switching from...
tree
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commitdiff
2017-08-16
Jim Procter
JAL-2418 add GPL to main sources
tree
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Working with hidden columns
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Added hidden columns group selection - almost...
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Selecting on wrapped alignments
tree
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commitdiff
2017-08-16
kiramt
JAL-2556 start to account for wrapped alignments
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Tidy
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 fix resize
tree
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commitdiff
2017-08-16
kiramt
JAL-2556 Code tidy
tree
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commitdiff
2017-08-16
kiramt
JAL-2556 Resolved group update on colouring and escape
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Added sequence group update event.
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Draw selection group - works on scroll but...
tree
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commitdiff
2017-08-15
kiramt
JAL-2265 turn off NPE
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 choose appropriate alphabet for filtering...
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 source formatting
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 filterNonStandardResidues configurable for...
tree
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commitdiff
2017-08-14
Jim Procter
Merge branch 'patch/JAL-2663_filterAACons' into develop
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2663 flag and filter to exclude non-standard amino...
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2663 source formatting
tree
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commitdiff
2017-08-14
kiramt
JAL-2664 Initial change to drawing hidden regions in...
tree
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commitdiff
2017-08-10
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
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commitdiff
2017-08-10
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-08-10
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-08-10
kiramt
JAL-2587 tidy
tree
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commitdiff
2017-08-10
gmungoc
JAL-2660 used saved value of ignoreGapsInConsensus...
tree
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commitdiff
2017-08-10
kiramt
JAL-2587 Tinkering with progress panel appearance
tree
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commitdiff
2017-08-10
kiramt
JAL-2587 prevented double overview recalc on opening...
tree
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commitdiff
2017-08-10
gmungoc
JAL-2505 apply changed description to new, not deleted...
tree
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commitdiff
2017-08-10
gmungoc
JAL-2658 ensure features dropdown entries are unique
tree
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commitdiff
2017-08-10
gmungoc
JAL-2593 don't filter out 'colour by label' features
tree
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commitdiff
2017-08-10
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
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commitdiff
2017-08-10
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2426 Rfam download suffix
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2426 JAL-1270 report Xfam download URL used if...
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2425 raw stockholm download URLs
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2425 remove overloaded getSequenceRecords method...
tree
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commitdiff
2017-08-09
kiramt
JAL-2587 Adjusting height for progress bar
tree
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commitdiff
2017-08-09
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
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commitdiff
2017-08-09
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-08-09
kiramt
JAL-2587 fiddling with dimensions
tree
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commitdiff
2017-08-09
kiramt
JAL-2587 Keep progress bar panel in position regardless...
tree
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commitdiff
2017-08-09
gmungoc
JAL-2480 inline one method, improve comments
tree
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commitdiff
2017-08-09
Jim Procter
Merge branch 'bug/JAL-2634' into develop
tree
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commitdiff
2017-08-09
Jim Procter
Merge branch 'documentation/JAL-2418_release2102' into...
tree
|
commitdiff
2017-08-09
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-09
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-08
gmungoc
JAL-2560 alternative fix (reinstate lost line of code)
tree
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commitdiff
2017-08-08
kiramt
JAL-2587 tidies
tree
|
commitdiff
2017-08-08
kiramt
JAL-2587 Added progress bar to overview. Not fully...
tree
|
commitdiff
2017-08-08
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-08
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-08
gmungoc
JAL-2649 JAL-2650 wait for Conservation calc to complet...
tree
|
commitdiff
2017-08-08
gmungoc
JAL-2650 configure new viewport settings before selecti...
tree
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commitdiff
2017-08-07
Jim Procter
Merge branch 'bug/JAL-2592userDefinedScheme' into develop
tree
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commitdiff
2017-08-07
gmungoc
JAL-2609 clear sequence/annotation region before rendering
tree
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commitdiff
2017-08-07
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
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commitdiff
2017-08-07
gmungoc
JAL-2609 erase scale above before drawing scale/hidden...
tree
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commitdiff
2017-08-07
gmungoc
JAL-2609 revised design (always draw all scales, fast...
tree
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commitdiff
2017-08-04
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
|
commitdiff
2017-08-04
kiramt
JAL-2587 First working effort
tree
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commitdiff
2017-08-03
gmungoc
JAL-2643 updated threshold on threshold value focus...
tree
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commitdiff
2017-08-03
gmungoc
JAL-2609 process only up to end of alignment when shift...
tree
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commitdiff
2017-08-03
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-03
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
|
commitdiff
2017-08-03
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-03
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-08-03
gmungoc
JAL-2435 test for 'mirror font' option visible (not...
tree
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commitdiff
2017-08-03
gmungoc
JAL-2609 erase space below, and other fixes
tree
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commitdiff
2017-08-03
kiramt
JAL-2587 Attempt to add timed dissolve
tree
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commitdiff
2017-08-02
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
|
commitdiff
2017-08-02
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-08-02
gmungoc
JAL-2609 further progress towards scroll right fast...
tree
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commitdiff
2017-08-01
Jim Procter
Merge branch 'bug/JAL-2632' into develop
tree
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commitdiff
2017-08-01
gmungoc
JAL-2609 white fill vertical scale before fast paint...
tree
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commitdiff
2017-08-01
gmungoc
JAL-2609 JAL-2636 ensure scrolled on scale above is...
tree
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commitdiff
2017-08-01
gmungoc
JAL-2636 draw scale marks up to second last column
tree
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commitdiff
2017-08-01
gmungoc
Merge branch 'features/JAL-2446NCList' into features...
tree
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commitdiff
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