JAL-3210 merged from develop: build.gradle and gradle.properties
[jalview.git] / src / jalview /
2019-05-20 Ben SoaresJAL-3254 Improved memory setting (allows mem for OS...
2019-05-06 gmungocJAL-3239 release note
2019-05-06 gmungocMerge remote-tracking branch 'origin/bug/JAL-3239monosp...
2019-05-06 gmungocJAL-3244 delete obsolete method
2019-05-02 gmungocJAL-3239 draw EPS or SVG one character at a time (even... bug/JAL-3239monospacedEps
2019-05-02 gmungocJAL-3244 renamed Platform method for clarity bug/JAL-3244jmolWindows
2019-05-01 gmungocJAL-3244 ignore file path separator when comparing...
2019-04-30 gmungocJAL-3241 simplified enum constructors for classloadabil...
2019-04-29 gmungocJAL-2738 JAL-2743 update unit test to match new VCF...
2019-04-26 gmungocMerge branch 'develop' of https://source.jalview.org...
2019-04-26 gmungocJAL-2743 class Javadoc
2019-04-26 gmungocJAL-2738 JAL-2743 properties to map VCF header to speci...
2019-04-26 Ben SoaresJAL-3233 Added isAMac check for -Xdock:icon addition...
2019-04-26 gmungocJAL-3010 borderless 'x' for "delete this filter condition"
2019-04-26 gmungocJAL-2808 better tooltip 'delete this condition'
2019-04-26 gmungocJAL-3226 removal of superseded changes
2019-04-26 gmungocJAL-3010 borderless 'x' for "delete this filter condition"
2019-04-25 Ben SoaresJAL-3224 JAL-3225 Some fixes in install4j template...
2019-04-25 Ben SoaresJAL-3224 JAL-3225 Added lines to check for updates...
2019-04-24 Jim ProcterMerge branch 'task/JAL-3225_Integration_Gradle_building...
2019-04-23 Jim ProcterMerge branch 'develop' into bug/JAL-3224_getdown_change...
2019-04-23 hansonr[JAL-3226] problem that JavaScript (or Java) may consol...
2019-04-20 gmungocJAL-2791 tailored message if find fails on selection...
2019-04-18 hansonrminor code clean up
2019-04-18 hansonrminor code clean up
2019-04-18 hansonr// BH 2018.04.18 comment: addNotify() is not appropriat...
2019-04-18 hansonrAdds check for gap padding to disallow fast paint upon...
2019-04-18 hansonrremoves unnecessary clearFastPaint
2019-04-18 hansonrCorrects incorrect calls to ViewportRanges.setEndSeq()
2019-04-18 hansonrpushing again, just comments
2019-04-18 hansonrhack for fastpaint Java bug upshifting one line after...
2019-04-18 hansonrreverting seqPanel.seqCanvas.clearFastPaint();
2019-04-18 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-04-18 gmungocJAL-3193 dbSource always "ENSEMBL"
2019-04-18 hansonrexplicit Hashtable objects
2019-04-18 hansonradds an explicit clearing of the SeqCanvas fastPaint...
2019-04-17 gmungocJAL-3026 fix bug loading Jalview Project (in Java)
2019-04-17 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-04-16 hansonrcaching of DnD files dropped
2019-04-16 hansonrlocalizes Thread colourby so that it does not cause...
2019-04-16 hansonrcomments only
2019-04-16 hansonrmissing check for JavaScript in client response for...
2019-04-16 gmungocMerge branch 'bug/JAL-3218scalePanelPopups' into develop
2019-04-15 Ben SoaresJAL-3130 Helper classes to take Class Exceptions when...
2019-04-15 gmungocJAL-3193 no separatge EnsemblGenomes source in Sequence...
2019-04-15 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-04-11 Jim ProcterMerge branch 'develop' into task/JAL-3130_Java_11_inves...
2019-04-10 gmungocJAL-3193 rest.ensemblgenomes.org merged to rest.ensembl.org
2019-04-10 gmungocJAL-3018 REST version updated to 10.0
2019-04-09 hansonrbetter comment regarding setting recognized ajax-enable...
2019-04-09 hansonrcode formatting only
2019-04-05 hansonrFile caching activated explicitly in Platform
2019-04-05 hansonrcommand line fix
2019-04-05 Ben SoaresJAL-3130 This commit concentrates on the Mac OS X DMG...
2019-04-05 hansonrMerge branch 'Jalview-JS/develop' of https://source...
2019-04-05 hansonrfixes for Jalview command-line URI code
2019-04-05 gmungocJAL-3204 update to uniprot schema
2019-04-04 hansonrMerge branch 'Jalview-JS/develop' of https://source...
2019-04-04 hansonrj2sNative cleanup; fix for JTextArea preferred height...
2019-04-04 gmungocJAL-3220 j2sIgnore on 3 more main methods
2019-04-04 gmungocJAL-3220 j2sIgnore on main methods on test / utility...
2019-04-04 gmungocJAL-3220 unneeded main methods removed
2019-04-04 Ben SoaresJAL-3130 trying to be Java 1.8 source compatible -...
2019-04-04 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-04-03 hansonrreplacing @j2sNative with @j2sIgnore where appropriate...
2019-04-03 hansonrremoving early SplitPane SwingJS hack
2019-04-03 gmungocJAL-3021 show Sequence Details with cursor at top
2019-04-03 hansonrj2sNative clean-up. Fixes problem with second try of...
2019-04-02 hansonr#210 Fixes Ensembl fetch problem (really)
2019-04-02 gmungocJAL-3218 allow both Hide and Reveal in scale panel... bug/JAL-3218scalePanelPopups
2019-04-01 hansonrMerge branch 'Jalview-JS/develop' of https://source...
2019-04-01 hansonrnote to self: Time to write a good interface and stop...
2019-04-01 Ben SoaresJAL-3130 JAL-3007 Added gradle build for Java 11 and...
2019-04-01 gmungocJAL-3032 use small example Ensembl gene for JalviewJS
2019-04-01 hansonrJSON refactoring of a few methods; fixing JavaScript...
2019-04-01 hansonrjalview-pca-div added
2019-03-31 hansonradds TreePanel name jalview-tree
2019-03-31 hansonradds StructureViewer name jalview-structureviewer
2019-03-31 hansonradds SplitFrame name jalview-splitframe;
2019-03-31 hansonradds RnaStructureViewer name jalview-rnastructureviewer;
2019-03-31 hansonradds Desktop name jalview-desktop;
2019-03-31 hansonradds AlignFrame name jalview-alignment;
2019-03-31 hansonrclean up implicit object refs
2019-03-31 hansonrCache JS adds search of Info for jalview_xxx properties
2019-03-28 hansonr#211 corrects swingjs.JSUtil.parseJSONRaw$S call
2019-03-28 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-03-28 gmungocMerge branch 'feature/JAL-3181linkOrdering' into develop
2019-03-27 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-03-27 gmungocJAL-2620 improved error reporting on failure to load...
2019-03-27 gmungocJAL-3032 small formatting and isJS() tidy
2019-03-27 hansonrreinstating test data for JalviewJS
2019-03-27 hansonrcomment out of @j2sNative block
2019-03-27 hansonrallows web-page embedding
2019-03-27 hansonrconsolidation of Platform isJS calls
2019-03-27 hansonrisJS cleanup
2019-03-27 hansonrclean-up of isJS business for (temporarily) noneditable...
2019-03-27 hansonrPlatform comment about isPopupTrigger Jalview-JS/developPreFrameEmbedding
2019-03-26 hansonrupgraded Platform.java
2019-03-25 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-03-25 gmungocJAL-2717 adjusted code so default correctly returned...
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