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[jalview.git]
/
src
/
2005-04-13
amwaterhouse
treeMenuItem added, conservation sliders, finder top...
tree
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commitdiff
2005-04-11
jprocter
added the alignment quality calculation from the old...
tree
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commitdiff
2005-04-11
jprocter
Conservation symbols : + = all props are conserved...
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commitdiff
2005-04-11
jprocter
Fixed the job-failed message.
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commitdiff
2005-04-11
jprocter
Now tries to set viewing parameters for distances and...
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commitdiff
2005-04-08
amwaterhouse
try out spinning logo
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commitdiff
2005-04-08
amwaterhouse
return from painting if size is 0
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commitdiff
2005-04-08
amwaterhouse
Printing wrapped alignment corrected
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commitdiff
2005-04-08
amwaterhouse
Display of wrapped search results corrected
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commitdiff
2005-04-08
amwaterhouse
endREs -1
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commitdiff
2005-04-08
amwaterhouse
conservation changed to quality
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commitdiff
2005-04-08
amwaterhouse
clear the last area in fast paint
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commitdiff
2005-04-08
amwaterhouse
scale above, left right added
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commitdiff
2005-04-08
amwaterhouse
bug adding null sequence to selection fixed
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commitdiff
2005-04-08
amwaterhouse
reads fasta files from uniprot web page
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commitdiff
2005-04-08
amwaterhouse
scale above, left rigt added
tree
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commitdiff
2005-04-08
jprocter
remember: do not check in quick bug fixes that you...
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commitdiff
2005-04-08
jprocter
recent rebuild of the JPred client from WSDL2Java
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commitdiff
2005-04-08
jprocter
Alignment quality with funky coloured histograms.
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commitdiff
2005-04-07
amwaterhouse
no more group editor
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commitdiff
2005-04-07
amwaterhouse
check annotation label widths as well as id widths
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commitdiff
2005-04-07
amwaterhouse
calls repaint, not just refreshpanels
tree
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commitdiff
2005-04-07
amwaterhouse
for now, draw selection box bottom -1
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commitdiff
2005-04-07
amwaterhouse
seals selection box if at bottom of alignment
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commitdiff
2005-04-07
amwaterhouse
draws threshold position according to threshold, not...
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commitdiff
2005-04-07
amwaterhouse
no longer used
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commitdiff
2005-04-07
amwaterhouse
Remove paintFlag ref
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commitdiff
2005-04-07
amwaterhouse
GRPAH_HEIGHT variable
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commitdiff
2005-04-07
amwaterhouse
checkfor gap characters
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commitdiff
2005-04-07
amwaterhouse
paintFlag removed
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commitdiff
2005-04-07
amwaterhouse
fastPaint flag added
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commitdiff
2005-04-07
amwaterhouse
reomve call to repaint
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commitdiff
2005-04-07
amwaterhouse
find top and bottom of group
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commitdiff
2005-04-07
amwaterhouse
add note about desktopManager
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commitdiff
2005-04-07
amwaterhouse
add fastPaint boolean
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commitdiff
2005-04-07
amwaterhouse
remove setdecorated line
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commitdiff
2005-04-06
amwaterhouse
dont draw first block if colour is null
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commitdiff
2005-04-06
amwaterhouse
fill in the gaps
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commitdiff
2005-04-06
amwaterhouse
setDesktopManager(new)
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commitdiff
2005-04-06
amwaterhouse
paint is now in drawComponent
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commitdiff
2005-04-06
amwaterhouse
showAnnotation added
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commitdiff
2005-04-06
amwaterhouse
annoation in print version
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commitdiff
2005-04-06
amwaterhouse
DONT SHOW ANNOTATIONS IF WRAPPED
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commitdiff
2005-04-06
jprocter
next version of Jpred functionality using new client...
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commitdiff
2005-04-06
jprocter
New method for helping to quickly map different aligned...
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commitdiff
2005-04-06
jprocter
New client code for JPred service includes return of...
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commitdiff
2005-04-06
amwaterhouse
mosueOver graph gives int, not float
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commitdiff
2005-04-06
amwaterhouse
Fast paint method implemented
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commitdiff
2005-04-01
amwaterhouse
Alignment Annotation added
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commitdiff
2005-04-01
amwaterhouse
ignore jnetconf
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commitdiff
2005-04-01
amwaterhouse
parses jpredfile into new alignment annotation
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commitdiff
2005-04-01
amwaterhouse
update conservation and consensus
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commitdiff
2005-04-01
amwaterhouse
anti_aliasing on
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commitdiff
2005-04-01
amwaterhouse
Uses conservation graph
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commitdiff
2005-04-01
amwaterhouse
testing Graphics2D
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commitdiff
2005-04-01
amwaterhouse
setMaximizable(false)
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commitdiff
2005-04-01
amwaterhouse
Build date determination
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commitdiff
2005-03-31
jprocter
doh - stupid jim.
tree
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commitdiff
2005-03-31
jprocter
Added a flag to control if the "/<seq_start>-<seq_end...
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commitdiff
2005-03-31
jprocter
added a an axis log4j appender property to the jalview...
tree
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commitdiff
2005-03-30
jprocter
fixed the log4j messages.
tree
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commitdiff
2005-03-30
jprocter
cleaned up some comments and exception messages.
tree
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commitdiff
2005-03-30
jprocter
Fixed a sensible default leaf distance (for files where...
tree
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commitdiff
2005-03-24
amwaterhouse
fix printing error
tree
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commitdiff
2005-03-23
amwaterhouse
new seq selection -1
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commitdiff
2005-03-23
amwaterhouse
adjustForRemoveLeft / Right added
tree
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commitdiff
2005-03-23
amwaterhouse
works even if col is 1 residue
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commitdiff
2005-03-23
amwaterhouse
reads MSF files even if PILEUP is missing
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commitdiff
2005-03-23
amwaterhouse
drawableSequence removed
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commitdiff
2005-03-23
amwaterhouse
no longer used
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commitdiff
2005-03-23
amwaterhouse
secondarycolour not used
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commitdiff
2005-03-23
amwaterhouse
add .fasta to save dialog
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commitdiff
2005-03-23
amwaterhouse
correct wrap alignment scrollbar size
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commitdiff
2005-03-23
amwaterhouse
resetSeqLimits altered
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commitdiff
2005-03-23
amwaterhouse
override showSaveDialog to prompt user if file exists
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commitdiff
2005-03-22
amwaterhouse
put bioinformatics into message
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commitdiff
2005-03-22
amwaterhouse
drag and drop files into jalview
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commitdiff
2005-03-22
amwaterhouse
add swing runnable to refresh panel on startup
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commitdiff
2005-03-22
amwaterhouse
read start end if available
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commitdiff
2005-03-21
amwaterhouse
altered layout
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commitdiff
2005-03-21
amwaterhouse
alter vgap
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commitdiff
2005-03-21
amwaterhouse
identifies more varied blc files
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commitdiff
2005-03-21
amwaterhouse
blc file reader modified
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commitdiff
2005-03-21
amwaterhouse
add setValue method
tree
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commitdiff
2005-03-21
amwaterhouse
fix select group bug
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commitdiff
2005-03-21
amwaterhouse
new method for outlining groups
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commitdiff
2005-03-21
amwaterhouse
add outline colour
tree
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commitdiff
2005-03-21
amwaterhouse
prevent idpanel being to narrow
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commitdiff
2005-03-21
amwaterhouse
maintain slider values when click on a group
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commitdiff
2005-03-21
amwaterhouse
hide idwidthadjuster if wrapped
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commitdiff
2005-03-21
amwaterhouse
add coloursChanging boolean
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commitdiff
2005-03-21
amwaterhouse
group has outline colour
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commitdiff
2005-03-21
amwaterhouse
use system l&f
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commitdiff
2005-03-21
amwaterhouse
Created by jalview
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commitdiff
2005-03-21
amwaterhouse
correct eps png bug missing last 2 lines
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commitdiff
2005-03-18
amwaterhouse
eps and png output
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commitdiff
2005-03-18
amwaterhouse
remove jpg output
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commitdiff
2005-03-18
amwaterhouse
save eps and png
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commitdiff
2005-03-18
amwaterhouse
delete postscript output!!
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commitdiff
2005-03-18
jprocter
rough JPredService client copied from WebServices project.
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commitdiff
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