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Merge branch 'Jalview-JS/develop' of https://source.jalview.org/git/jalview into...
[jalview.git]
/
src
/
2019-03-07
gmungoc
JAL-2250 default Apply Colour to All Groups selected
tree
|
commitdiff
2019-03-07
Jim Procter
JAL-3127 set ‘updateStructures’ flag for viewports...
tree
|
commitdiff
2019-03-07
gmungoc
JAL-2717 corrected i18n of colour scheme names
tree
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commitdiff
2019-03-07
gmungoc
Merge branch 'feature/JAL-3205symmetricCalc' into develop
tree
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commitdiff
2019-03-06
gmungoc
Merge branch 'tasks/JAL-3035_remove_dasobert_dependency...
tree
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commitdiff
2019-03-06
gmungoc
JAL-3035 more das bits removed
tree
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commitdiff
2019-03-06
Jim Procter
JAL-3208 re-enable the setprop CLI arg, but only in...
tree
|
commitdiff
2019-03-05
gmungoc
Merge branch 'bug/JAL-3201groupClustal' into develop
tree
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commitdiff
2019-03-05
gmungoc
Merge remote-tracking branch 'origin/features/JAL-2620a...
tree
|
commitdiff
2019-03-05
gmungoc
Merge branch 'bug/JAL-2621' into develop
tree
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commitdiff
2019-03-05
gmungoc
Merge remote-tracking branch 'origin/bug/JAL-3141_Messa...
tree
|
commitdiff
2019-03-05
gmungoc
Merge remote-tracking branch 'origin/bug/JAL-2839findWi...
tree
|
commitdiff
2019-03-05
gmungoc
Merge remote-tracking branch 'origin/bug/JAL-914multipl...
tree
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commitdiff
2019-03-05
gmungoc
Merge remote-tracking branch 'origin/features/JAL-2814f...
tree
|
commitdiff
2019-03-05
Ben Soares
JAL-3141 Fixed inconsistent (changed) message labels...
bug/JAL-3141_Messages_discrepancy_fix
tree
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commitdiff
2019-03-05
gmungoc
Merge remote-tracking branch 'origin/bug/JAL-3002fastPa...
tree
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commitdiff
2019-03-05
gmungoc
JAL-3049 JAL-3032 tidy/i18n code, remove redundant...
tree
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commitdiff
2019-03-05
gmungoc
JAL-3049 redo (part of) commit 92bc328
tree
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commitdiff
2019-03-05
gmungoc
JAL-3054 small y-overlap of tooltip and cell leads...
tree
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commitdiff
2019-03-05
gmungoc
Merge remote-tracking branch 'origin/bug/JAL-3049colour...
tree
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commitdiff
2019-03-05
gmungoc
JAL-3205 added a delta parameter to Matrix.equals()
feature/JAL-3205symmetricCalc
tree
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commitdiff
2019-03-04
gmungoc
Merge branch 'bug/JAL-3072scrollThread' into merge...
tree
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commitdiff
2019-03-04
gmungoc
Merge remote-tracking branch 'origin/bug/JAL-3082select...
tree
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commitdiff
2019-03-04
gmungoc
JAL-3206 avoid divide by zero when threshold is graphMi...
tree
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commitdiff
2019-03-04
gmungoc
Merge branch 'bug/JAL-3099alignmentVisibleWidth' into...
tree
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commitdiff
2019-03-04
gmungoc
Merge remote-tracking branch 'origin/tasks/JAL-3035_rem...
tree
|
commitdiff
2019-03-04
gmungoc
Merge branch 'bug/JAL-3120restoreFeatureColour' into...
tree
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commitdiff
2019-03-03
gmungoc
JAL-3205 faster calculation with symmetric score matrix
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'bug/JAL-2791exportFilteredFeature' into...
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'feature/JAL-3093wrappedModeTooltips'...
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'feature/JAL-1244stretchStatusMsg' into...
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'bug/JAL-3139colocatedFeatures' into develop
tree
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commitdiff
2019-03-01
gmungoc
JAL-3154 disable reorder columns before adding to viewport
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'bug/JAL-3154tableColumnDrag' into develop
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'bug/JAL-3161annotationTooltipRange' into...
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'bug/JAL-3158selectionBroadcasts' into...
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'bug/JAL-3164complementOverview' into...
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'merge/JAL-3140' into develop
tree
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commitdiff
2019-03-01
gmungoc
JAL-3140 update for change to SequenceI api
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'feature/intervalStoreJ' into merge/JAL...
tree
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commitdiff
2019-03-01
gmungoc
JAL-3140 reduced coupling to intervalstore.jar
feature/intervalStoreJ
tree
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commitdiff
2019-02-28
gmungoc
JAL-3140 confine intervalstore imports to jalview.datam...
tree
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commitdiff
2019-02-28
gmungoc
Merge branch 'bug/JAL-2420revealAllMenu' into develop
tree
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commitdiff
2019-02-28
gmungoc
Merge branch 'bug/JAL-3166npeAllRowsHidden' into develop
tree
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commitdiff
2019-02-28
gmungoc
Merge branch 'feature/JAL-3169cancelOverwrite' into...
tree
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commitdiff
2019-02-28
gmungoc
Merge branch 'feature/JAL-3143ensemblJSON' into merge...
tree
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commitdiff
2019-02-28
gmungoc
Merge remote-tracking branch 'origin/feature/JAL-3141_b...
tree
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commitdiff
2019-02-28
Jim Procter
Merge branch 'feature/JAL-3141_backupfiles_for211'...
merge/develop_feature/JAL-3141_backupfiles_for211
tree
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commitdiff
2019-02-28
gmungoc
JAL-3032 any url parameter not "j2s..." taken as Jalvie...
Jalview-BH/JAL-3026-JAL-3063-JAXB
tree
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commitdiff
2019-02-27
gmungoc
JAL-2527 default Overview 'hide hidden' i.e. WYSIWYG
tree
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commitdiff
2019-02-27
gmungoc
JAL-2527 default Overview 'hide hidden' i.e. WYSIWYG
tree
|
commitdiff
2019-02-27
gmungoc
JAL-3202 reduced scope of rendering flags
tree
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commitdiff
2019-02-27
gmungoc
JAL-3202 discard zero percentages in extracted profile
tree
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commitdiff
2019-02-26
gmungoc
JAL-3201 JAL-2386 don't pre-select 'apply to all groups'
tree
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commitdiff
2019-02-26
gmungoc
JAL-3201 group colour schemes distinct instances
tree
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commitdiff
2019-02-25
gmungoc
JAL-3032 Jalview (as JS) parse query params to main...
tree
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commitdiff
2019-02-25
gmungoc
JAL-3032 JalviewJS2 converts url query parameters to...
tree
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commitdiff
2019-02-25
gmungoc
JAL-3200 fast lookup of DSSP3 notation
tree
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commitdiff
2019-02-24
gmungoc
JAL-3198 don't recalculate group conservation for Id...
tree
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commitdiff
2019-02-24
gmungoc
JAL-3198 SequenceGroup 'bulk constructor' without dupli...
tree
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commitdiff
2019-02-22
gmungoc
JAL-2915 don't recalculate Overview on scroll to positi...
tree
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commitdiff
2019-02-22
gmungoc
JAL-2738 don't set AF as feature score
tree
|
commitdiff
2019-02-22
Ben Soares
JAL-3141 improved message for asking whether to delete...
tree
|
commitdiff
2019-02-21
Ben Soares
JAL-3141 Sensible refactoring for confirming deleting...
tree
|
commitdiff
2019-02-21
gmungoc
JAL-3187 handle no mapping / complement features withou...
tree
|
commitdiff
2019-02-20
gmungoc
Merge branch 'feature/JAL-3143ensemblJSON' into feature...
tree
|
commitdiff
2019-02-20
gmungoc
JAL-3187 read peptide variant from CSQ:HGVSp if present...
tree
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commitdiff
2019-02-19
gmungoc
JAL-3187 hacks to get peptide variant in to Jmol hover...
tree
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commitdiff
2019-02-18
gmungoc
JAL-3187 reset ViewStyle on Cancel in FeatureSettings
tree
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commitdiff
2019-02-18
gmungoc
JAL-3187 'on top' optional for complementary features
tree
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commitdiff
2019-02-17
Ben Soares
JAL-3141 User warning when deleting old backup files...
tree
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commitdiff
2019-02-15
Ben Soares
JAL-3141 re-order deletion of old files and check lastM...
tree
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commitdiff
2019-02-15
gmungoc
JAL-3010 getColumnClass() never return null
tree
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commitdiff
2019-02-14
Ben Soares
JAL-3141 Added warning/confirmation when suffixReverse...
tree
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commitdiff
2019-02-14
Ben Soares
JAL-3141 Moved 'Previously saved scheme' combo box...
tree
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commitdiff
2019-02-12
gmungoc
JAL-3032 default Autosearch to off for JalviewJS
tree
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commitdiff
2019-02-05
gmungoc
JAL-3032 check enough sequences selected on construction
tree
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commitdiff
2019-02-05
gmungoc
JAL-3048 JS-compatible confirm dialog on delete all
tree
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commitdiff
2019-02-04
hansonr
SequenceFetcher JvCacheableInputBox isJS test
tree
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commitdiff
2019-02-04
hansonr
refactoring for DBMODList
tree
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commitdiff
2019-02-04
hansonr
adds protype size to JTextArea hack for nonexistent...
tree
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commitdiff
2019-02-04
hansonr
fixing array processing order
tree
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commitdiff
2019-02-04
hansonr
re-transpiled MIGLayout; JS-adapted AnnotationColumnChooser
tree
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commitdiff
2019-02-01
hansonr
removes unnecessary org.xml.sax; these are in SwingJS
tree
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commitdiff
2019-02-01
Ben Soares
JAL-3141 Slight efficiency gain in detecting backupfile...
tree
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commitdiff
2019-01-31
hansonr
Split pane removing title bar for JInternalFrames
tree
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commitdiff
2019-01-30
gmungoc
Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' of
tree
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commitdiff
2019-01-30
gmungoc
JAL-3144 don't change comma to semi-colon if not requested!
tree
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commitdiff
2019-01-30
hansonr
woops.
tree
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commitdiff
2019-01-30
hansonr
Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' of...
tree
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commitdiff
2019-01-30
hansonr
fixes unidentified Java problem
tree
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commitdiff
2019-01-30
gmungoc
JAL-3056 no export as BioJS in JalviewJS
tree
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commitdiff
2019-01-30
Ben Soares
JAL-3141 Enabled the 'Include backpup files' checkbox...
tree
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commitdiff
2019-01-29
hansonr
JSON writing fix, JColorChooser (mnemonic change) fix
tree
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commitdiff
2019-01-29
Ben Soares
JAL-3141 Found a good fix for updating the FileChooser...
tree
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commitdiff
2019-01-29
Ben Soares
JAL-3141 Found a (not ideal) fix for updating the FileC...
tree
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commitdiff
2019-01-29
gmungoc
Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' of...
tree
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commitdiff
2019-01-29
gmungoc
Merge branch 'feature/JAL-3143ensemblJSON' into trialMerge
tree
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commitdiff
2019-01-29
gmungoc
JAL-3143 format alleles array for feature description
tree
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commitdiff
2019-01-29
hansonr
iterators
tree
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commitdiff
next