2020-08-31 |
gmungoc | JAL-1191 use Cache.log for logging |
tree | commitdiff |
2020-08-31 |
gmungoc | JAL-1191 reduce logging level for warnings |
tree | commitdiff |
2020-08-24 |
gmungoc | JAL-3018 updated reviewed REST version to 12.0 |
tree | commitdiff |
2020-08-21 |
Jim Procter | JAL-3615 code tidy, improve unit test |
tree | commitdiff |
2020-08-20 |
Ben Soares | JAL-2656 better read of (potential) gzip magic bytes |
tree | commitdiff |
2020-08-18 |
gmungoc | JAL-2656 Java 8 compatible test for gzipped, refactored... |
tree | commitdiff |
2020-08-17 |
Jim Procter | JAL-3490 don't init the combo box's history cache for... |
tree | commitdiff |
2020-08-17 |
Jim Procter | JAL-3490 merged with 2.11.2 develop |
tree | commitdiff |
2020-08-17 |
Jim Procter | Merge branch 'task/JAL-3597memoryLeakTest' into develop |
tree | commitdiff |
2020-08-12 |
Ben Soares | Merge branch 'develop' of https://source.jalview.org... |
tree | commitdiff |
2020-08-12 |
Jim Procter | Merge branch 'task/JAL-3608_property_set_laf_and_tests... |
tree | commitdiff |
2020-08-09 |
Ben Soares | JAL-3691 Changed .toUppoerCase().startsWith(...) to... |
tree | commitdiff |
2020-08-05 |
gmungoc | JAL-3692 parse multiline feature qualifiers and escaped... |
tree | commitdiff |
2020-08-04 |
Ben Soares | JAL-3477 Added -help text for jvmmempc and jvmmemmax... |
tree | commitdiff |
2020-08-03 |
Jim Procter | Merge branch 'bug/JAL-2983negativeSliderMin' into develop |
tree | commitdiff |
2020-07-29 |
Jim Procter | JAL-3371 JAL-2983 don't modify 'extent' of slider ... |
tree | commitdiff |
2020-07-28 |
Jim Procter | Merge branch 'feature/JAL-3615gzipXfam' into develop |
tree | commitdiff |
2020-07-28 |
Jim Procter | JAL-3615 JAL-2656 missing import after cherrypick |
tree | commitdiff |
2020-07-28 |
Jim Procter | JAL-2656 recognise non-HTTP URI input streams as gzippe... |
tree | commitdiff |
2020-07-28 |
Jim Procter | JAL-2656 recognise Gzipped file input streams by their... |
tree | commitdiff |
2020-07-27 |
gmungoc | JAL-3692 set CDS /product as EMBLCDSPROTEIN description |
tree | commitdiff |
2020-07-27 |
gmungoc | JAL-3692 refactor/complete parsing, more unit test... |
tree | commitdiff |
2020-07-27 |
Jim Procter | JAL-3697 show total number of features not shown |
tree | commitdiff |
2020-07-27 |
Jim Procter | JAL-3696 log the error message from the exception to... |
tree | commitdiff |
2020-07-24 |
gmungoc | JAL-3692 parse DE for description, and other refactoring... |
tree | commitdiff |
2020-07-22 |
gmungoc | JAL-3692 unit test (J03321), fixes, dbrefs; todo: prote... |
tree | commitdiff |
2020-07-21 |
gmungoc | JAL-3692 EMBL flatfile fetcher / parser (todo: CDS... |
tree | commitdiff |
2020-07-14 |
gmungoc | JAL-1421 last change tidied up properly |
tree | commitdiff |
2020-07-14 |
gmungoc | JAL-1421 types added to nameHash and nodeHash maps |
tree | commitdiff |
2020-07-14 |
gmungoc | JAL-3597 additional references nulled, bug in test... |
tree | commitdiff |
2020-07-07 |
Ben Soares | JAL-3608 Changes from code review CR-JAL-236 |
tree | commitdiff |
2020-07-07 |
gmungoc | JAL-1424 streamlined message checker, corrected applet... |
tree | commitdiff |
2020-07-06 |
gmungoc | JAL-3311 JAL-3141 JAL-3144 tidying obsolete message... |
tree | commitdiff |
2020-07-02 |
gmungoc | JAL-2656 JAL-3615 check response headers to test for... |
tree | commitdiff |
2020-07-02 |
gmungoc | JAL-3615 used gzip endpoints for Pfam and Rfam |
tree | commitdiff |
2020-06-29 |
Jim Procter | Merge branch 'develop' of source.jalview.org/git/jalvie... |
tree | commitdiff |
2020-06-29 |
Jim Procter | JAL-3493 clear search highlights when escape/deselect all |
tree | commitdiff |
2020-06-29 |
gmungoc | JAL-3674 more finessed asynchronous structure commands |
tree | commitdiff |
2020-06-29 |
gmungoc | Merge branch 'develop' of https://source.jalview.org... |
tree | commitdiff |
2020-06-29 |
gmungoc | JAL-3518 corrected pulled up focusView() command |
tree | commitdiff |
2020-06-29 |
gmungoc | JAL-3518 corrected action on pulled up closeViewer() |
tree | commitdiff |
2020-06-28 |
gmungoc | JAL-3551 PyMOL command constants tidied |
tree | commitdiff |
2020-06-28 |
gmungoc | JAL-3551 fit to window (zoom) command for PyMOL |
tree | commitdiff |
2020-06-26 |
Jim Procter | JAL-3673 make sure font metrics are updated if dealing... |
tree | commitdiff |
2020-06-26 |
Jim Procter | JAL-3518 fix highlighting in Jalview for selections... |
tree | commitdiff |
2020-06-26 |
Jim Procter | JAL-3672 debug=false means no debug output |
tree | commitdiff |
2020-06-26 |
Jim Procter | JAL-3672 more efficient when debug not enabled |
tree | commitdiff |
2020-06-26 |
Jim Procter | JAL-3671 hardwire log4j.root logger to INFO to supress... |
tree | commitdiff |
2020-06-26 |
gmungoc | JAL-3518 tidy up asynchronous structure command execution |
tree | commitdiff |
2020-06-25 |
gmungoc | JAL-2010 unused prototype method removed |
tree | commitdiff |
2020-06-25 |
gmungoc | JAL-3518 pull up [get|list]ResidueAttributes to Structu... |
tree | commitdiff |
2020-06-23 |
gmungoc | JAL-3518 separation of ChimeraXManager, pull up of... |
tree | commitdiff |
2020-06-23 |
gmungoc | JAL-3518 pull up closeViewer() and external viewer... |
tree | commitdiff |
2020-06-01 |
gmungoc | JAL-3518 more test coverage for structure commands |
tree | commitdiff |
2020-05-29 |
gmungoc | JAL-2422 test updated |
tree | commitdiff |
2020-05-29 |
gmungoc | Merge branch 'feature/JAL-3551Pymol' into develop |
tree | commitdiff |
2020-05-29 |
gmungoc | JAL-3551 null pointer defence while structure files... feature/JAL-3551Pymol |
tree | commitdiff |
2020-05-28 |
gmungoc | JAL-3551 corrected Pymol open session command |
tree | commitdiff |
2020-05-28 |
gmungoc | JAL-2422 correct ChimeraX save/open session commands... |
tree | commitdiff |
2020-05-26 |
gmungoc | JAL-3624 log when SIFTS mapping fails |
tree | commitdiff |
2020-05-26 |
gmungoc | Merge branch 'feature/JAL-3624siftsInJS' into develop |
tree | commitdiff |
2020-05-26 |
gmungoc | JAL-1761 pattern for structure viewer construction... |
tree | commitdiff |
2020-05-24 |
Jim Procter | JAL-3407 redact Java 8 incompatible '<>' with anonymous... |
tree | commitdiff |
2020-05-21 |
gmungoc | JAL-3551 copy Jalview features to Pymol 'p' (with pull... |
tree | commitdiff |
2020-05-21 |
gmungoc | JAL-2422 highlight ChimeraX selection (ChimeraX-1.0... |
tree | commitdiff |
2020-05-20 |
gmungoc | JAL-3626 use Viewer.scriptWait() to send Jmol commands... |
tree | commitdiff |
2020-05-19 |
gmungoc | JAL-3621 corrected sequence feature sort and test |
tree | commitdiff |
2020-05-19 |
gmungoc | Merge branch 'develop' into feature/JAL-3551Pymol |
tree | commitdiff |
2020-05-19 |
gmungoc | JAL-3624 use temp file for SIFT download in JS, correct... feature/JAL-3624siftsInJS |
tree | commitdiff |
2020-05-18 |
gmungoc | JAL-3463 avoid Thread.sleep() as not supported in SwingJS |
tree | commitdiff |
2020-05-18 |
gmungoc | JAL-3621 update to intervalstore v1.1 |
tree | commitdiff |
2020-05-18 |
gmungoc | Merge branch 'Jalview-JS/develop' into develop |
tree | commitdiff |
2020-05-18 |
gmungoc | JAL-3613 remove debug code committed in error |
tree | commitdiff |
2020-05-15 |
gmungoc | JAL-3619 default silently to Jmol if viewerType absent... |
tree | commitdiff |
2020-05-15 |
gmungoc | JAL-3551 pull up Close Viewer dialog to base class |
tree | commitdiff |
2020-05-15 |
gmungoc | Merge branch 'feature/JAL-3551Pymol' into feature/JAL... |
tree | commitdiff |
2020-05-15 |
gmungoc | JAL-3551 raise label on ('highlight') structure residue... |
tree | commitdiff |
2020-05-12 |
gmungoc | JAL-3518 tidy method, remove obsolete comment |
tree | commitdiff |
2020-05-12 |
gmungoc | JAL-3518 failsafe check for null Jmol filename while... |
tree | commitdiff |
2020-05-11 |
gmungoc | JAL-3551 concatenate colour by sequence commands for... |
tree | commitdiff |
2020-05-11 |
gmungoc | JAL-2422 JAL-3551 viewer text/variables generalised... |
tree | commitdiff |
2020-05-11 |
gmungoc | JAL-2422 ChimeraX paths (versions up to 1.0) added... |
tree | commitdiff |
2020-05-11 |
gmungoc | JAL-1333 additional Chimera versions for Windows instal... |
tree | commitdiff |
2020-05-11 |
gmungoc | JAL-2422 restore saved ChimeraX session from project |
tree | commitdiff |
2020-05-04 |
Ben Soares | JAL-3608 streamlined LaF methods and allow specificying... |
tree | commitdiff |
2020-05-03 |
Ben Soares | JAL-3608 also look at user pref PREFERRED_LAF |
tree | commitdiff |
2020-05-01 |
gmungoc | JAL-3613 check sequence overlap when matching search... |
tree | commitdiff |
2020-05-01 |
Ben Soares | JAL-3608 Now reporting the actual LookAndFeel in Java... |
tree | commitdiff |
2020-05-01 |
Ben Soares | JAL-3608 Added java builtin NimbusLookAndFeel option... |
tree | commitdiff |
2020-04-30 |
Ben Soares | JAL-3608 Enforcing MetalLookAndFeel as default on linux... |
tree | commitdiff |
2020-04-30 |
Ben Soares | JAL-3608 Added 'metal' option for laf property |
tree | commitdiff |
2020-04-30 |
gmungoc | JAL-3551 save structure viewer session refactorings... |
tree | commitdiff |
2020-04-30 |
gmungoc | JAL-3551 tidied error handling for HTTP request |
tree | commitdiff |
2020-04-25 |
gmungoc | Merge branch 'develop' into feature/JAL-3551Pymol |
tree | commitdiff |
2020-04-23 |
soares | JAL-3608 JAL-3416 Added a 'gtk' option. Not currently... |
tree | commitdiff |
2020-04-22 |
soares | JAL-3608 saved in Eclipse with auto formatting |
tree | commitdiff |
2020-04-22 |
Ben Soares | JAL-3608 Added CrossPlatform LaF and made configurable... |
tree | commitdiff |
2020-04-21 |
Jim Procter | JAL-3407 add GPL license to Jalview source files |
tree | commitdiff |
2020-04-21 |
Jim Procter | Merge branch 'bug/JAL-3574filterByPOS' into documentati... |
tree | commitdiff |
2020-04-21 |
Jim Procter | Merge branch 'bug/JAL-3567virtualFeatureCoordinates... |
tree | commitdiff |
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