git://source.jalview.org
/
jalview.git
/ history
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
first ⋅ prev ⋅
next
JAL-4116 relegate the failed to promote warning to Console.debug so most users won...
[jalview.git]
/
src
/
2023-01-25
James Procter
JAL-4116 relegate the failed to promote warning to...
tree
|
commitdiff
2023-01-25
James Procter
Merge branch 'new_feature/JAL-4019_ambiguous_base_colou...
tree
|
commitdiff
2023-01-24
James Procter
Merge branch 'merge/JAL-1988_JAL-3772+JAL-3416+JAL...
tree
|
commitdiff
2023-01-20
Jim Procter
Merge branch 'patch/JAL-4114_updated_3dbeacons_api...
tree
|
commitdiff
2023-01-20
Jim Procter
JAL-4114 model_page_url not required in v2.0 response
patch/JAL-4114_updated_3dbeacons_api
tree
|
commitdiff
2023-01-20
Jim Procter
Merge branch 'patch/JAL-4114_updated_3dbeacons_api...
tree
|
commitdiff
2023-01-20
Jim Procter
Merge branch 'patch/Release_2_11_2_6_Branch' into develop
tree
|
commitdiff
2023-01-20
Jim Procter
JAL-2353 primary ref candidates that should be promoted...
patch/Release_2_11_2_6_Branch
tree
|
commitdiff
2023-01-20
Jim Procter
JAL-4114 only rank model qualities that are computed...
tree
|
commitdiff
2023-01-20
Jim Procter
JAL-4114 alphafold now marked as AB-INITIO so adjust...
tree
|
commitdiff
2023-01-20
Jim Procter
JAL-4114 additional warnings when PDBe doesn’t return...
tree
|
commitdiff
2023-01-20
Jim Procter
JAL-4114 patch REST client for changed JSON schema...
tree
|
commitdiff
2023-01-20
Jim Procter
JAL-4114 formatting
tree
|
commitdiff
2023-01-06
Ben Soares
JAL-3416 More explicit setting of FlatLaf macOS theme
tree
|
commitdiff
2023-01-06
Ben Soares
JAL-3416 Upgraded FlatLaf to 3.0 and added macOS theme...
tree
|
commitdiff
2023-01-06
Ben Soares
JAL-3416 remove a missed panel titlebar icon in TreePanel
tree
|
commitdiff
2022-11-30
Ben Soares
JAL-4101 Updated DEFAULT_RFAM_BASEURL
tree
|
commitdiff
2022-11-30
Jim Procter
JAL-2353 patch for Ensembl refs from uniprot - needs...
tree
|
commitdiff
2022-11-29
Ben Soares
JAL-4101 Updated DEFAULT_RFAM_BASEURL
tree
|
commitdiff
2022-11-16
Ben Soares
Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG...
tree
|
commitdiff
2022-11-16
Ben Soares
JAL-3416 make flatlaf default for linux
improvement/JAL-3416_default_to_LIVE_DRAG_MODE_for_flatlaf
tree
|
commitdiff
2022-11-16
Ben Soares
JAL-4019 finalised a boolean option and tidied some...
tree
|
commitdiff
2022-11-14
Ben Soares
JAL-4019 Make diagnostic message debug level
tree
|
commitdiff
2022-11-13
Ben Soares
JAL-4019 small but important corrections to array order...
tree
|
commitdiff
2022-11-13
Ben Soares
JAL-4019 improvement to short sequence nucleotide detec...
tree
|
commitdiff
2022-11-10
Ben Soares
JAL-4019 Nucleotide Ambiguity Colour Scheme added....
tree
|
commitdiff
2022-11-09
Ben Soares
JAL-3416 Add necessary logo to non-internal Frames
tree
|
commitdiff
2022-11-09
Ben Soares
Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG...
tree
|
commitdiff
2022-11-09
Ben Soares
JAL-3416 Add necessary logo to non-internal Frames
tree
|
commitdiff
2022-11-09
Ben Soares
Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG...
tree
|
commitdiff
2022-11-09
Ben Soares
JAL-3416 Remove all JFrame/JInternalFrame icons (set...
tree
|
commitdiff
2022-11-09
Ben Soares
Merge branch 'bug/JAL-1988_JAL-3772_improved_quit_handl...
tree
|
commitdiff
2022-11-09
Ben Soares
JAL-1988 JAL-3772 Test for FORCE_QUIT whilst saving...
bug/JAL-1988_JAL-3772_improved_quit_handling
tree
|
commitdiff
2022-11-08
Ben Soares
Merge branch 'bug/JAL-1988_JAL-3772_improved_quit_handl...
tree
|
commitdiff
2022-11-08
Ben Soares
JAL-1988 JAL-3776 Formatting JvOptionPane
tree
|
commitdiff
2022-11-08
Ben Soares
JAL-1988 JAL-3772 Fixes highlighted by tests
tree
|
commitdiff
2022-11-04
Ben Soares
JAL-3416 Added logoIcon to quit (and potentially other...
tree
|
commitdiff
2022-11-04
Ben Soares
JAL-1998 JAL-3772 JAL-3416 Merge conflict resolution...
tree
|
commitdiff
2022-11-03
Ben Soares
JAL-3416 File Chooser iconified, JvOptionPanes iconifie...
tree
|
commitdiff
2022-11-03
Ben Soares
JAL-1988 JAL-3772 Allow other window closing dialogs...
tree
|
commitdiff
2022-11-03
Ben Soares
JAL-3416 More JInternalFrame icons
tree
|
commitdiff
2022-11-03
Ben Soares
JAL-1988 JAL-3772 Tidying of unspecified Callable decla...
tree
|
commitdiff
2022-11-03
Ben Soares
JAL-3416 Start to add JInternalFrame icons (to replace...
tree
|
commitdiff
2022-11-02
Ben Soares
JAL-1988 JAL-3772 Moving packages to somewhere more...
tree
|
commitdiff
2022-11-01
Ben Soares
JAL-3416 set flatlaf default drag mode to LIVE_DRAG_MODE
tree
|
commitdiff
2022-11-01
Ben Soares
JAL-1988 JAL-3772 Change default alignmentviewport...
tree
|
commitdiff
2022-10-29
Ben Soares
JAL-1988 JAL-3772 removed a debugging log line
tree
|
commitdiff
2022-10-28
Ben Soares
JAL-1988 JAL-3772 Removed 'Wait' button from waitDialog...
tree
|
commitdiff
2022-10-28
Ben Soares
JAL-1988 JAL-3772 Fixed wait between waitDialog appeara...
tree
|
commitdiff
2022-10-27
Ben Soares
JAL-1988 Allow generic Container object in JvOptionPane...
tree
|
commitdiff
2022-10-27
Ben Soares
Merge branch 'develop' into bug/JAL-1988_JAL-3772_impro...
tree
|
commitdiff
2022-10-25
Ben Soares
JAL-3772 silly NPE error fixed
tree
|
commitdiff
2022-10-25
Ben Soares
JAL-3416 Making FlatLaF default for macs due to a probl...
tree
|
commitdiff
2022-10-24
Ben Soares
JAL-1988 JAL-3772 wait timer working first time but...
tree
|
commitdiff
2022-10-24
Ben Soares
JAL-1988 JAL-3772 Non-blocking modal dialogs for unsave...
tree
|
commitdiff
2022-10-11
Jim Procter
JAL-4073 fix PEBCAK failure
tree
|
commitdiff
2022-10-06
Jim Procter
stable url for PFAM retrieval via interpro api :) JAL...
tree
|
commitdiff
2022-10-06
Jim Procter
JAL-1551 formatting
tree
|
commitdiff
2022-10-06
Jim Procter
JAL-4073 Pfam retrieval now works via a template includ...
tree
|
commitdiff
2022-10-06
Jim Procter
Patch for JAL-4074 - any content ending in ‘gzip’ recog...
tree
|
commitdiff
2022-09-29
Ben Soares
Merge branch 'develop' into bug/JAL-1988_JAL-3772_impro...
tree
|
commitdiff
2022-09-26
Ben Soares
JAL-1988 JAL-3772 linked undostack to saved changes...
tree
|
commitdiff
2022-09-23
Ben Soares
JAL-1988 JAL-3772 Quit confirmation dialog boxes with...
tree
|
commitdiff
2022-09-23
Ben Soares
JAL-3676 extra information about jalview_properties...
tree
|
commitdiff
2022-09-23
Ben Soares
JAL-1988 property based fake delay whilst saving projec...
tree
|
commitdiff
2022-09-14
Jim Procter
Merge branch 'bug/JAL-3612_overviewFeatureOrdering...
tree
|
commitdiff
2022-09-02
Ben Soares
JAL-1988 Added a saves in progress check for quit
tree
|
commitdiff
2022-08-31
Ben Soares
JAL-1988 added a saveInProgress stack to BackupFiles
tree
|
commitdiff
2022-08-08
Jim Procter
JAL-4046 JAL-3993 imports reformatting
tree
|
commitdiff
2022-08-08
Jim Procter
JAL-4046 JAL-3993 patch for 2.11.2.4 release
tree
|
commitdiff
2022-08-08
Jim Procter
Merge branch 'task/JAL-3991_check_actual_JAVA_VERSION_a...
tree
|
commitdiff
2022-08-08
Jim Procter
Merge branch 'improvement/JAL-4014_gecos_colour_schemes...
tree
|
commitdiff
2022-08-08
Jim Procter
Merge branch 'patch/JAL-4036_uniprot_fts_legacy_endpoin...
tree
|
commitdiff
2022-08-08
Jim Procter
JAL-4034 show the loading spinner when switching betwee...
tree
|
commitdiff
2022-08-08
Jim Procter
Merge branch 'features/JAL-4034_improve_3dbeacons_butto...
tree
|
commitdiff
2022-07-25
Ben Soares
JAL-4036 moved a comment block
tree
|
commitdiff
2022-07-25
Ben Soares
JAL-4034 button looks better also on other OSes with...
tree
|
commitdiff
2022-07-24
Ben Soares
JAL-4034 add round corners to 3DB confirmation button...
tree
|
commitdiff
2022-07-22
Ben Soares
JAL-4036 Changes made from code review CR-JAL-265
tree
|
commitdiff
2022-07-22
Ben Soares
JAL-4036 Add getDbName to the GFTSPanelI and add an...
tree
|
commitdiff
2022-07-22
Ben Soares
JAL-4036 removing the query field code from the dropdow...
tree
|
commitdiff
2022-07-21
Ben Soares
JAL-4036 Don't autosearch changing index when autosearc...
tree
|
commitdiff
2022-07-21
Ben Soares
JAL-4036 add search fieldname to dropdown list
tree
|
commitdiff
2022-07-21
Ben Soares
JAL-4036 New configuration, target and pagination proce...
tree
|
commitdiff
2022-07-20
Jim Procter
JAL-4045 - don't apply distribution dependent scale...
tree
|
commitdiff
2022-07-15
Ben Soares
JAL-4034 Use the new non-modal JDialog for 3DBeacons...
tree
|
commitdiff
2022-07-15
Ben Soares
JAL-4034 Allow request for non-modal JDialog, which...
tree
|
commitdiff
2022-07-12
Ben Soares
JAL-4034 change to jalview property name
tree
|
commitdiff
2022-07-12
Ben Soares
JAL-4034 showConfirmDialog works for both desktop and...
tree
|
commitdiff
2022-07-11
Ben Soares
JAL-4034 Non-blocking 3D Beacons query after warning...
tree
|
commitdiff
2022-07-11
Ben Soares
JAL-4034 allow a jalview_property to set the threshold...
tree
|
commitdiff
2022-07-04
Jim Procter
JAL-4034 fix #3 change uniprot ref fetch dialog to...
tree
|
commitdiff
2022-07-04
Jim Procter
JAL-4034 Fix #2 show an icon and a button to press...
tree
|
commitdiff
2022-06-30
Jim Procter
JAL-4036 use the legacy endpoint (and report the FTS...
tree
|
commitdiff
2022-06-28
Ben Soares
Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS...
tree
|
commitdiff
2022-06-28
Ben Soares
JAL-1988 Don't put Quit in the File menu if there's...
tree
|
commitdiff
2022-06-23
Ben Soares
Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS...
tree
|
commitdiff
2022-06-23
Ben Soares
JAL-1988 Check for setHandler capability to avoid About...
tree
|
commitdiff
2022-06-17
Ben Soares
JAL-3027 Avoid FlatLAF Desktop class is JalviewJS
tree
|
commitdiff
2022-06-15
Jim Procter
JAL-1988 JAL-3416 avoid unnecessary static flag
tree
|
commitdiff
next