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JAL-4369 uniprotkb - try to avoid another redirect response
[jalview.git] / src /
2024-01-10 James ProcterJAL-4369 uniprotkb - try to avoid another redirect... tree | commitdiff
2024-01-09 James ProcterJAL-4369 use rest.uniprot.org as fetch domain tree | commitdiff
2023-12-20 Ben SoaresJAL-4238 Marked where JalviewJS is hanging on 3DBeacons... tree | commitdiff
2023-12-20 Ben SoaresJAL-4059 Added some more Platform.addJ2SDirectDatabaseC... tree | commitdiff
2023-12-15 Ben SoaresJAL-4059 Only run this once tree | commitdiff
2023-12-15 Ben SoaresJAL-4059 Use namespaced query parameters in preference... tree | commitdiff
2023-12-14 Ben SoaresMerge branch 'develop' into bug/JAL-4238_PAEs_not_being... tree | commitdiff
2023-12-14 James ProcterMerge branch 'bug/JAL-4353_cannot_output_multiple_diffe... tree | commitdiff
2023-12-14 James ProcterMerge branch 'bug/JAL-4353_cannot_output_multiple_diffe... tree | commitdiff
2023-12-14 James ProcterMerge branch 'develop' into bug/JAL-4238_PAEs_not_being... tree | commitdiff
2023-12-14 Ben SoaresMerge branch 'develop' into bug/JAL-4238_PAEs_not_being... tree | commitdiff
2023-12-14 James ProcterMerge branch 'develop' into bug/JAL-2934proportionalScr... bug/JAL-2934proportionalScrolling tree | commitdiff
2023-12-14 Ben SoaresJAL-4059 Improvement to launch indicator tree | commitdiff
2023-12-12 James ProcterJAL-4217 don’t try and export an image when Jmol is... tree | commitdiff
2023-12-12 Ben SoaresMerge branch 'bug/JAL-4353_cannot_output_multiple_diffe... tree | commitdiff
2023-12-12 James ProcterMerge branch 'develop' into bug/JAL-4353_cannot_output_... tree | commitdiff
2023-12-12 James ProcterJAL-4217 close internal frame on the swing thread to... tree | commitdiff
2023-12-12 Ben SoaresJAL-4353 helper method and test for primary/secondary... tree | commitdiff
2023-12-12 James ProcterMerge branch 'bug/JAL-4353_cannot_output_multiple_diffe... tree | commitdiff
2023-12-06 Ben SoaresJAL-4353 re-used random color code tree | commitdiff
2023-12-06 Ben SoaresJAL-4353 Preserve the user given 'linkedId' with ArgVal... tree | commitdiff
2023-12-06 James ProcterMerge branch 'patch/JAL-840_clustalx_docs_fix' into... tree | commitdiff
2023-12-06 James ProcterMerge branch 'bug/JAL-2934proportionalScrolling' into... tree | commitdiff
2023-12-06 Ben SoaresJAL-4353 Add a 'random' colour to produce a random... tree | commitdiff
2023-12-05 Ben SoaresJAL-4353 Add secondary Types for Args, for STRUCTUREIMA... tree | commitdiff
2023-12-04 Ben SoaresJAL-4059 Attempts to set JalviewJS desktop geometry... tree | commitdiff
2023-11-30 James ProcterJAL-4342 test and patch checking annotation csv export... patch/JAL-4342_emptyannotationsexport tree | commitdiff
2023-11-30 James ProcterPatch fixes JAL-4165 - added to release notes JAL-4351 tree | commitdiff
2023-11-30 Ben SoaresMerge branch 'bug/JAL-4344_structureimage_cl_arg_only_c... tree | commitdiff
2023-11-30 Ben SoaresJAL-4344 careful application of -Djava.awt.headless... tree | commitdiff
2023-11-29 Ben SoaresMerge branch 'bug/JAL-4238_PAEs_not_being_shown_in_Jalv... tree | commitdiff
2023-11-29 Ben SoaresJAL-4344 Some fixes of waiting blocks, and headless... tree | commitdiff
2023-11-27 Ben SoaresJAL-4238 minor errors fixed for JalviewJS structure... tree | commitdiff
2023-11-24 Ben SoaresJAL-4059 Allow form-created querystring style values... tree | commitdiff
2023-11-23 Ben SoaresJAL-4059 Storing important thisApplet information in... tree | commitdiff
2023-11-23 Ben SoaresJAL-4059 Made jalview.bin.JalviewJS to use new command... tree | commitdiff
2023-11-23 Ben SoaresMerge branch 'develop' into bug/JAL-4238_PAEs_not_being... tree | commitdiff
2023-11-23 Ben SoaresJAL-4059 rename vars to j2s_ this and that for clarity tree | commitdiff
2023-11-22 Ben SoaresJAL-4059 Send bespoke Info hash parameters into jalview... tree | commitdiff
2023-11-22 James ProcterMerge branch 'patch/JAL-4345_pae_epas1_doubleclick... tree | commitdiff
2023-11-21 James ProcterJAL-4345 patch and release notes patch/JAL-4345_pae_epas1_doubleclick tree | commitdiff
2023-11-21 Ben SoaresJAL-4238 an attempt to set JalviewJS desktop overflow... tree | commitdiff
2023-11-21 Ben SoaresJAL-4238 Changing visibility of locateInRange(int)... tree | commitdiff
2023-11-20 Ben SoaresJAL-4348 Add newer versions of Chimera and ChimeraX... tree | commitdiff
2023-11-20 James ProcterJAL-4343 patch for JAL-4347 uniprot non-pos feature... tree | commitdiff
2023-11-16 Ben SoaresMerge branch 'develop' into bug/JAL-4238_PAEs_not_being... tree | commitdiff
2023-11-16 Ben SoaresJAL-4238 ignore thread.sleeps in jalviewjs. Added a... tree | commitdiff
2023-11-15 James ProcterMerge branch 'bug/JAL-4334_unknownstartenduniprotfeatur... tree | commitdiff
2023-11-15 James ProcterMerge branch 'patch/JAL-4222_100s_timeout_on_imagexport... tree | commitdiff
2023-11-15 James ProcterJAL-4273 actually pass startSeq etc on to rendering... tree | commitdiff
2023-11-15 James ProcterJAL-4222 bail if we wait too long for Jmol to save... patch/JAL-4222_100s_timeout_on_imagexport tree | commitdiff
2023-11-15 James ProcterJAL-4090 blocker patch JAL-3772 tidy up groovy console... tree | commitdiff
2023-11-15 James ProcterJAL-4090 JAL-4334 position status when start, end or... bug/JAL-4334_unknownstartenduniprotfeatures tree | commitdiff
2023-11-15 Ben SoaresJAL-3836 Allow .ext.gz files to be recognised in the... tree | commitdiff
2023-11-13 James ProcterMerge branch 'develop' into bug/JAL-4059_update_swingJS... tree | commitdiff
2023-11-13 Ben SoaresMerge branch 'develop' into bug/JAL-4059_update_swingJS... tree | commitdiff
2023-11-13 Ben SoaresJAL-4059 fixed a test that is now working as expected... tree | commitdiff
2023-11-13 Ben SoaresJAL-4059 Fix the tooltip formatting for when, e.g.... tree | commitdiff
2023-11-13 James ProcterJAL-4090 JAL-1551 source license tree | commitdiff
2023-11-13 Ben SoaresMerge branch 'develop' into bug/JAL-4059_update_swingJS... tree | commitdiff
2023-11-13 James ProcterMerge branch 'develop' into bug/JAL-4059_update_swingJS... tree | commitdiff
2023-11-13 James ProcterJAL-4236 don’t look for headers in JalviewJS tree | commitdiff
2023-11-13 James ProcterJAL-4336 set preferred dimensions for JTextBox workarou... tree | commitdiff
2023-11-13 James ProcterMerge branch 'develop' into bug/JAL-4059_update_swingJS... tree | commitdiff
2023-11-13 James ProcterJAL-4090 fix JAL-4236 - just put the name of the class... tree | commitdiff
2023-11-13 James ProcterJAL-4331 construct and pass on overview title before... tree | commitdiff
2023-11-10 Ben SoaresJAL-4240 Remove unnecessary whitespace, being rendered... tree | commitdiff
2023-11-10 Ben SoaresJAL-4059 Tidy getting the namespace, and save the names... tree | commitdiff
2023-11-09 Ben SoaresJAL-4059 Fix up Jsmol calls and delete html files from... tree | commitdiff
2023-11-07 Ben SoaresJAL-4059 fix that boolean for non-value query string... tree | commitdiff
2023-11-07 Ben SoaresMerge branch 'develop' into bug/JAL-4059_update_swingJS... tree | commitdiff
2023-11-03 Ben SoaresJAL-4239 Using own id generation to avoid Random.nextLo... tree | commitdiff
2023-11-03 James ProcterJAL-4090 JAL-1551 spotlessApply tree | commitdiff
2023-11-02 Ben SoaresMerge branch 'develop' into bug/JAL-4059_update_swingJS... tree | commitdiff
2023-11-02 Ben SoaresJAL-4059 New namespaced query string parameters. tree | commitdiff
2023-11-02 James ProcterJAL-4169 fix up urls to faq and documentation tree | commitdiff
2023-11-02 James ProcterMerge branch 'develop' into patch/JAL-3921_jmol_session... tree | commitdiff
2023-11-02 James ProcterJAL-4217 wrap progress bar creation in an invokeLater... tree | commitdiff
2023-11-02 James ProcterJAL-1551 formatting tree | commitdiff
2023-11-02 James ProcterMerge branch 'develop' into patch/JAL-3088_finalbraceno... tree | commitdiff
2023-11-02 James ProcterJAL-4289 JAL-4253 lower end of group boundary vertical... tree | commitdiff
2023-11-01 James ProcterMerge branch 'patch/JAL-4281_idwidthandannotHeight_in_p... tree | commitdiff
2023-11-01 James ProcterMerge branch 'feature/JAL-4315_fc_draganddrop' into... tree | commitdiff
2023-11-01 James ProcterMerge branch 'patch/JAL-4317_enablefeaturewhenadjusting... tree | commitdiff
2023-11-01 James ProcterMerge branch 'develop' into patch/JAL-4281_idwidthandan... tree | commitdiff
2023-11-01 James ProcterMerge branch 'patch/JAL-4260_fix_up_select_via_ruler_in... tree | commitdiff
2023-11-01 James ProcterJAL-4260 encapsulate logic for resolving nearest column... patch/JAL-4260_fix_up_select_via_ruler_in_wrapped tree | commitdiff
2023-11-01 James ProcterJAL-4260 reinstate annotation auto-id-width for wrapped... tree | commitdiff
2023-11-01 Ben SoaresJAL-4059 Add the newest exampleFile_2_7.jar to the... tree | commitdiff
2023-10-31 James ProcterJAL-4260 fix up click/drags on ruler area in wrapped... tree | commitdiff
2023-10-31 Ben SoaresJAL-4059 simpler reimplementation of StringUtils.separa... tree | commitdiff
2023-10-31 James ProcterJAL-4260 right align the annotation labels regardless... tree | commitdiff
2023-10-31 James ProcterJAL-244 noticed NPE exception was possible when visibil... tree | commitdiff
2023-10-31 James ProcterJAL-244 knock on - make sure alignPanel is laid out... tree | commitdiff
2023-10-31 Ben SoaresMerge branch 'develop' into bug/JAL-4059_update_swingJS... tree | commitdiff
2023-10-31 Ben SoaresJAL-4059 Converting Pattern/Matcher methods that are... tree | commitdiff
2023-10-30 James ProcterJAL-4317 enable display of feature when showing its... patch/JAL-4317_enablefeaturewhenadjustingstyle tree | commitdiff
2023-10-30 James ProcterHandle feature settings files loaded via drag and drop... feature/JAL-4315_fc_draganddrop tree | commitdiff
2023-10-30 James ProcterJAL-4315 allow feature settings to be loaded from a... tree | commitdiff
2023-10-30 James ProcterJAL-4315 identify feature settings file from its xml... tree | commitdiff
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