2005-03-18 |
amwaterhouse | remove jpg output |
tree | commitdiff |
2005-03-18 |
amwaterhouse | save eps and png |
tree | commitdiff |
2005-03-18 |
amwaterhouse | delete postscript output!! |
tree | commitdiff |
2005-03-18 |
jprocter | rough JPredService client copied from WebServices project. |
tree | commitdiff |
2005-03-18 |
amwaterhouse | null point bug fixed |
tree | commitdiff |
2005-03-18 |
jprocter | various loadTree bits for loading and saving trees. |
tree | commitdiff |
2005-03-18 |
jprocter | merged Loadtree and EPSfile and changed crlf. |
tree | commitdiff |
2005-03-18 |
jprocter | Save tree. |
tree | commitdiff |
2005-03-18 |
jprocter | Load and Save trees. |
tree | commitdiff |
2005-03-18 |
jprocter | Tree io modifications, including support for polytomous... |
tree | commitdiff |
2005-03-18 |
jprocter | New constructors for turning NewickFile objects into... |
tree | commitdiff |
2005-03-18 |
amwaterhouse | add all suffixes to file open |
tree | commitdiff |
2005-03-18 |
amwaterhouse | eps output facility |
tree | commitdiff |
2005-03-18 |
amwaterhouse | filefilter added |
tree | commitdiff |
2005-03-18 |
amwaterhouse | make eps, png files, filefilter added |
tree | commitdiff |
2005-03-18 |
amwaterhouse | remove unused constants |
tree | commitdiff |
2005-03-18 |
amwaterhouse | use new file filter |
tree | commitdiff |
2005-03-18 |
amwaterhouse | align suffix updated |
tree | commitdiff |
2005-03-18 |
amwaterhouse | acknowledge source and modify to take filter |
tree | commitdiff |
2005-03-18 |
amwaterhouse | new class |
tree | commitdiff |
2005-03-18 |
amwaterhouse | png and eps output added |
tree | commitdiff |
2005-03-17 |
amwaterhouse | hide image with mouse released |
tree | commitdiff |
2005-03-17 |
amwaterhouse | add a border |
tree | commitdiff |
2005-03-17 |
jprocter | Newick/New Hampshire tree format parser and generator. |
tree | commitdiff |
2005-03-17 |
amwaterhouse | version and last modified added |
tree | commitdiff |
2005-03-17 |
amwaterhouse | checks for last update |
tree | commitdiff |
2005-03-17 |
amwaterhouse | idspacefillerpanel has borderlayout |
tree | commitdiff |
2005-03-17 |
amwaterhouse | fullid is optional |
tree | commitdiff |
2005-03-17 |
amwaterhouse | takes into account fullid display |
tree | commitdiff |
2005-03-17 |
amwaterhouse | new class |
tree | commitdiff |
2005-03-17 |
amwaterhouse | idwidth is calculated in alignpanel, not idcanvas |
tree | commitdiff |
2005-03-17 |
amwaterhouse | idwidth is calculated in this panel, not idcanvas |
tree | commitdiff |
2005-03-17 |
amwaterhouse | view full id name optional |
tree | commitdiff |
2005-03-16 |
amwaterhouse | uses jalviewfilechooser |
tree | commitdiff |
2005-03-16 |
amwaterhouse | smaller splashscreen |
tree | commitdiff |
2005-03-16 |
amwaterhouse | scale bug fixed |
tree | commitdiff |
2005-03-16 |
amwaterhouse | selection area search bugs fixed |
tree | commitdiff |
2005-03-16 |
amwaterhouse | New class, allows sorting |
tree | commitdiff |
2005-03-15 |
amwaterhouse | Saves screen size on exit |
tree | commitdiff |
2005-03-15 |
amwaterhouse | setbackground white |
tree | commitdiff |
2005-03-15 |
amwaterhouse | initial label width bug might be fixed at last |
tree | commitdiff |
2005-03-15 |
amwaterhouse | stick with cross platform look and feel!!! |
tree | commitdiff |
2005-03-15 |
amwaterhouse | set groups visible(false) |
tree | commitdiff |
2005-03-15 |
amwaterhouse | new hscrollfillpanel |
tree | commitdiff |
2005-03-15 |
amwaterhouse | use the fileview |
tree | commitdiff |
2005-03-15 |
amwaterhouse | new class |
tree | commitdiff |
2005-03-15 |
amwaterhouse | try system look and feel for a change |
tree | commitdiff |
2005-03-15 |
amwaterhouse | selection removed, now SelectionGroup does same job... |
tree | commitdiff |
2005-03-10 |
amwaterhouse | fonts added to properties |
tree | commitdiff |
2005-03-10 |
amwaterhouse | actionlisteners added |
tree | commitdiff |
2005-03-10 |
amwaterhouse | search and font frames are now internalframes |
tree | commitdiff |
2005-03-10 |
amwaterhouse | resized scale panel |
tree | commitdiff |
2005-03-10 |
amwaterhouse | fonts changed as selection made |
tree | commitdiff |
2005-03-10 |
amwaterhouse | Scale canvas not needed |
tree | commitdiff |
2005-03-09 |
amwaterhouse | clear selection once group defined |
tree | commitdiff |
2005-03-09 |
amwaterhouse | clear selection |
tree | commitdiff |
2005-03-09 |
amwaterhouse | delete chars added |
tree | commitdiff |
2005-03-09 |
amwaterhouse | clear selection with escape key |
tree | commitdiff |
2005-03-09 |
amwaterhouse | font chooser added |
tree | commitdiff |
2005-03-09 |
amwaterhouse | allows deletion of chars, font chooser added |
tree | commitdiff |
2005-03-09 |
amwaterhouse | allows deletion of chars |
tree | commitdiff |
2005-03-09 |
amwaterhouse | dont perform blast search at present |
tree | commitdiff |
2005-03-08 |
amwaterhouse | add lower case residue props |
tree | commitdiff |
2005-03-08 |
jprocter | fixed interface for PID method. |
tree | commitdiff |
2005-03-08 |
jprocter | fixed so that alignment percentage ID is used for dista... |
tree | commitdiff |
2005-03-08 |
amwaterhouse | Tree fits to window by default |
tree | commitdiff |
2005-03-08 |
amwaterhouse | getCharwidth directly |
tree | commitdiff |
2005-03-08 |
amwaterhouse | Dont set paintFlags |
tree | commitdiff |
2005-03-08 |
amwaterhouse | dont set seqPanel paint flag |
tree | commitdiff |
2005-03-08 |
amwaterhouse | only set graphics black once at beginning of text |
tree | commitdiff |
2005-03-08 |
amwaterhouse | dont color gaps in sequence features |
tree | commitdiff |
2005-03-08 |
amwaterhouse | if resIndex > 19 return color.white |
tree | commitdiff |
2005-02-28 |
jprocter | added uniquify sequence id assertion. |
tree | commitdiff |
2005-02-28 |
jprocter | partial implementation of JNet server prediction. |
tree | commitdiff |
2005-02-28 |
jprocter | first stab at a JPredClient. |
tree | commitdiff |
2005-02-23 |
jprocter | basic jpred concise prediction reader. |
tree | commitdiff |
2005-02-23 |
jprocter | making Jemboss client more configurable. |
tree | commitdiff |
2005-02-23 |
jprocter | bug fix for unaligned sequence sets and clustal colours... |
tree | commitdiff |
2005-02-22 |
amwaterhouse | add history for cut and paste |
tree | commitdiff |
2005-02-21 |
amwaterhouse | images moved |
tree | commitdiff |
2005-02-21 |
amwaterhouse | note of user_defined_colours added |
tree | commitdiff |
2005-02-21 |
amwaterhouse | image moved |
tree | commitdiff |
2005-02-21 |
amwaterhouse | Sets USER_DEFINED_COLOUR as property |
tree | commitdiff |
2005-02-18 |
amwaterhouse | treepanel is now internalframe, has a menu |
tree | commitdiff |
2005-02-18 |
amwaterhouse | show sequence features is false by default |
tree | commitdiff |
2005-02-18 |
amwaterhouse | tree is printable |
tree | commitdiff |
2005-02-18 |
amwaterhouse | treepanel is now internalframe |
tree | commitdiff |
2005-02-18 |
amwaterhouse | featuresAdded = false |
tree | commitdiff |
2005-02-16 |
amwaterhouse | wrap alignment id drawing bug fixed |
tree | commitdiff |
2005-02-16 |
amwaterhouse | Save as jpg added |
tree | commitdiff |
2005-02-15 |
amwaterhouse | Fix bug when creating treepanel |
tree | commitdiff |
2005-02-15 |
amwaterhouse | abovePIDThreshold added to viewport |
tree | commitdiff |
2005-02-15 |
amwaterhouse | no action if supplied colour isnull |
tree | commitdiff |
2005-02-15 |
amwaterhouse | catch any pid or conservation related bugs here |
tree | commitdiff |
2005-02-15 |
amwaterhouse | add applytoallgroups colouring option |
tree | commitdiff |
2005-02-11 |
amwaterhouse | must add all features even if start and end res are... |
tree | commitdiff |
2005-02-11 |
amwaterhouse | move sequences up and down |
tree | commitdiff |
2005-02-11 |
amwaterhouse | add VK_F key, up down |
tree | commitdiff |
2005-02-11 |
amwaterhouse | end of seq adjustments |
tree | commitdiff |
2005-02-11 |
amwaterhouse | dont add new seqs to group |
tree | commitdiff |
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