| 2006-10-24 |
amwaterhouse | Use EditCommand.Cut |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | HistoryItem replaced by CommandI |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | EditCommand implemented |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | must translate graphics back the same amountcvs diff... |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Change Case is undoable |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | SequenceIndex might be beyond old height |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Must catch image outOfMemoryError |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | changeCase, removeGaps moved to commands package |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | maxIdLength redundant, deleteCols, trimLeft, removeGaps... |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Uses RemoveGapsCommand |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Remove variables not used |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Remove unneccessary import |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Make everything final |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | New accelerators |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Commented out for compilation |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | setOrder is public |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Commands which can be done, or undone |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Its historycvs remove jalview/datamodel/HistoryItem... |
tree | commitdiff |
| 2006-10-24 |
jprocter | fixes bug reported by Christopher Tan (help@jalview... |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | Wait for response from server before next sequence |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | showqual, showcons never used |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | remove html and body from tooltip |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | new feature args |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | Can set description for new features |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | Faded anntotations when recalculating |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | set conserve and quality null if outofmemory |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | No longer a FeatureListener |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | parseDescriptionHTML |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | draw text after linkimage |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | Remove system.out |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | Gerneral XML parse error |
tree | commitdiff |
| 2006-10-15 |
jprocter | fixed array out of bounds exception in copy constructor |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | showQuality may be updated during archive file load |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Convenient function findEndRes |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Add features from Popupmenu |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Overview may request index beyond alignment height |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Use i, not index if not representedSeqs |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | If conservation is null, disable Blosum62 and conservat... |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Annotasiont[j] might be null |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Local adjustForhiddenSeqs routine |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | RepresentGroup count items |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Null element checked |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | HiddenSequences now array, not hashtable |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Comment out debug to compile applet |
tree | commitdiff |
| 2006-10-11 |
jprocter | fixes exception (array index out of bounds - due to... |
tree | commitdiff |
| 2006-10-10 |
jprocter | refined id matching to pick the closest match (by lengt... |
tree | commitdiff |
| 2006-10-10 |
jprocter | debug message bugfix on duplicate tree leaf names. |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | No need to find index when deleting |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Calculate alWidth earlier |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Remove growing hashtable |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Check on null consensus |
tree | commitdiff |
| 2006-10-10 |
jprocter | bugfix for dodgy trees which contain the same leafname... |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Must repaint whole alignPanel |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | MaxResidue must be at least 2 |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Remove unneccessary separator |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Only getGroups once if groupEditingcvs update |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | 1.1 compatible |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Use AAFrequency final keys |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | SetTooltip empty |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Optimized |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | aaIndex replaces aaHash |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | static final strings for consensus keys |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Consensus and conservation updated in threads |
tree | commitdiff |
| 2006-10-09 |
jprocter | fixed log4j complaints for vamsas logging (again) |
tree | commitdiff |
| 2006-10-09 |
jprocter | fixed log4j complaints for vamsas logging. |
tree | commitdiff |
| 2006-10-09 |
jprocter | imported Vamsas bindings and alpha vamsas client code... |
tree | commitdiff |
| 2006-10-09 |
jprocter | set firstColumn property for an alignmentView object. |
tree | commitdiff |
| 2006-10-09 |
jprocter | fixed getCompactAlignment method to return proper cigar... |
tree | commitdiff |
| 2006-10-06 |
jprocter | Added filter so that input to a JPred job is *solely... |
tree | commitdiff |
| 2006-10-06 |
jprocter | javadoc |
tree | commitdiff |
| 2006-10-06 |
jprocter | new getVisibleContigs method mirrors the getVisibleCont... |
tree | commitdiff |
| 2006-10-06 |
amwaterhouse | AAFrequency optimized |
tree | commitdiff |
| 2006-10-06 |
amwaterhouse | Set consensus as hashtble[] |
tree | commitdiff |
| 2006-10-05 |
amwaterhouse | Multiple Views |
tree | commitdiff |
| 2006-10-05 |
amwaterhouse | BatchSize now 10 |
tree | commitdiff |
| 2006-10-05 |
amwaterhouse | OutOfMemoryError test |
tree | commitdiff |
| 2006-10-05 |
amwaterhouse | TabbedPanes for views |
tree | commitdiff |
| 2006-10-05 |
amwaterhouse | lower case available |
tree | commitdiff |
| 2006-10-05 |
amwaterhouse | AlignFrame must take width and height |
tree | commitdiff |
| 2006-10-05 |
amwaterhouse | Sequenceset may be empty, multiple views |
tree | commitdiff |
| 2006-10-05 |
amwaterhouse | DEFAULT_WIDTH |
tree | commitdiff |
| 2006-10-03 |
amwaterhouse | Check annotation is editable |
tree | commitdiff |
| 2006-10-03 |
amwaterhouse | Send DAS requests in batches of 20 |
tree | commitdiff |
| 2006-10-03 |
amwaterhouse | DB seqs may be lower or upper case |
tree | commitdiff |
| 2006-10-03 |
amwaterhouse | BoldFont upperCase |
tree | commitdiff |
| 2006-10-03 |
amwaterhouse | Remove empty() from feature ToolTip |
tree | commitdiff |
| 2006-10-03 |
amwaterhouse | Check selection scroll beyond aligmnment height |
tree | commitdiff |
| 2006-10-03 |
amwaterhouse | Check on vscrollMax values |
tree | commitdiff |
| 2006-10-03 |
amwaterhouse | upperCaseBold |
tree | commitdiff |
| 2006-10-03 |
amwaterhouse | TurnColour bug on popupmenu applet |
tree | commitdiff |
| 2006-09-27 |
jprocter | fixed tree building exception when one residue or a... |
tree | commitdiff |
| 2006-09-18 |
amwaterhouse | Draw hidden column marker correctly |
tree | commitdiff |
| 2006-09-18 |
amwaterhouse | click node to select sequences |
tree | commitdiff |
| 2006-09-15 |
amwaterhouse | Simplified schema |
tree | commitdiff |
| 2006-09-12 |
amwaterhouse | hideSequence hide all before recalc consensus |
tree | commitdiff |
| 2006-09-12 |
amwaterhouse | Allow alt for group editing |
tree | commitdiff |
| 2006-09-12 |
amwaterhouse | For now ignore middle mouse font resize on Mac applet |
tree | commitdiff |
| 2006-09-12 |
amwaterhouse | Allow alt button for Mac applet group editing |
tree | commitdiff |
| 2006-09-11 |
amwaterhouse | Comment out lower case colouring for bug fix release |
tree | commitdiff |
| 2006-09-11 |
amwaterhouse | Remove system.outs |
tree | commitdiff |
| next |
git://source.jalview.org / jalview.git / history