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Merge branch 'bug/JAL-4353_cannot_output_multiple_different_structure_images_for_one_...
[jalview.git] / test / jalview /
2023-12-12 James ProcterJAL-4353 failing test tree | commitdiff
2023-12-12 James ProcterJAL-4353 fix assert that successive test output files... tree | commitdiff
2023-12-06 James ProcterMerge branch 'patch/JAL-840_clustalx_docs_fix' into... tree | commitdiff
2023-11-30 James ProcterJAL-4342 test and patch checking annotation csv export... patch/JAL-4342_emptyannotationsexport tree | commitdiff
2023-11-20 James ProcterJAL-4343 patch for JAL-4347 uniprot non-pos feature... tree | commitdiff
2023-11-15 James ProcterMerge branch 'bug/JAL-4334_unknownstartenduniprotfeatur... tree | commitdiff
2023-11-15 James ProcterJAL-4090 JAL-4334 position status when start, end or... bug/JAL-4334_unknownstartenduniprotfeatures tree | commitdiff
2023-11-13 James ProcterJAL-4090 JAL-1551 source license tree | commitdiff
2023-11-13 James ProcterJAL-4334 failing test using whole of Q29079 accession... tree | commitdiff
2023-11-03 James ProcterJAL-4090 JAL-1551 spotlessApply tree | commitdiff
2023-11-01 James ProcterMerge branch 'patch/JAL-4281_idwidthandannotHeight_in_p... tree | commitdiff
2023-11-01 James ProcterJAL-4281 patch test so it passes on build server and... patch/JAL-4281_idwidthandannotHeight_in_project tree | commitdiff
2023-11-01 James ProcterMerge branch 'feature/JAL-4315_fc_draganddrop' into... tree | commitdiff
2023-11-01 James ProcterMerge branch 'develop' into patch/JAL-4281_idwidthandan... tree | commitdiff
2023-11-01 James ProcterMerge branch 'patch/JAL-4260_fix_up_select_via_ruler_in... tree | commitdiff
2023-11-01 James ProcterJAL-4260 encapsulate logic for resolving nearest column... patch/JAL-4260_fix_up_select_via_ruler_in_wrapped tree | commitdiff
2023-10-30 James ProcterJAL-4315 identify feature settings file from its xml... tree | commitdiff
2023-10-23 James ProcterJAL-4311 failing test case for 3d-beacons epas1_human... tree | commitdiff
2023-10-23 James ProcterMerge branch 'develop' into improvement/JAL-4124_dont_d... tree | commitdiff
2023-10-23 James ProcterJAL-4308 reduce number of refs to 5, always have canoni... tree | commitdiff
2023-10-22 James ProcterJAL-4153 avoid use of invokeAndWait, increase wait... tree | commitdiff
2023-10-19 Ben SoaresJAL-4305 Isolate and unify the Jalview object from... tree | commitdiff
2023-10-03 James ProcterJAL-4217 move CommandsTest to testTask3 involving struc... tree | commitdiff
2023-10-03 James ProcterMerge branch 'patch/JAL-4062_sort_and_merge_contiguousr... tree | commitdiff
2023-10-01 James ProcterJAL-4090 JAL-4291 disable failing test and note as... tree | commitdiff
2023-10-01 James ProcterJAL-244 attempt to fix broken test - still needs to... tree | commitdiff
2023-10-01 James ProcterJAL-244 JAL-4091 FIXME for JAL-3362 patch testCalculate... tree | commitdiff
2023-10-01 James ProcterJAL-4160 update args used in test suite for new CLI... tree | commitdiff
2023-09-29 James ProcterJAL-4153 move JvCacheableInputBoxTest to testTask2 tree | commitdiff
2023-09-28 James ProcterJAL-3858 improved contactInterval computation and added... tree | commitdiff
2023-09-26 James ProcterJAL-3858 JAL-4090 avoid NPE when given out of bound... tree | commitdiff
2023-09-20 James ProcterJAL-4217 - try to invokeAndWait on Desktop.closeAll... reviews/merge/JAL-4262+JAL-4265+JAL-4269+JAL-4274+JAL-4277+JAL-4285 tree | commitdiff
2023-09-20 James ProcterJAL-4274 fix test failure message typo tree | commitdiff
2023-09-16 Ben SoaresJAL-629 Fix a test and omit an incorrect error message... improvement/JAL-4269_reduce_variants_of_common_subvalue_parameters tree | commitdiff
2023-09-16 Ben SoaresJAL-4269 Now using --width, --height, --scale for both... tree | commitdiff
2023-09-13 Ben SoaresJAL-4274 comments to help follow the tests feature/JAL-4274_configurable_bitmap_export_preferences tree | commitdiff
2023-09-13 Ben SoaresJAL-4274 Tests for BIS defaults and overrides tree | commitdiff
2023-09-13 Ben SoaresJAL-4274 Use Cache BITMAP_* if no other image restricti... tree | commitdiff
2023-09-12 Ben SoaresJAL-4277 No longer using getCanonicalPath() for parent... tree | commitdiff
2023-09-12 Ben SoaresJAL-629 updated tests tree | commitdiff
2023-09-11 Ben SoaresJAL-4277 --mkdirs with cautious refusal for paths with .. tree | commitdiff
2023-09-08 James ProcterJAL-4281 store/restore ID width and manual adjustment... tree | commitdiff
2023-09-07 Ben SoaresMerge branch 'develop' into bug/JAL-4277_dirname_substi... tree | commitdiff
2023-09-07 Ben SoaresJAL-4277 fixed and improved tests tree | commitdiff
2023-09-07 Ben SoaresJAL-4277 Corrected choice of all or last opened linkedI... tree | commitdiff
2023-09-07 James ProcterJAL-4090 JAL-4160 JAL-4274 image export dimensions... tree | commitdiff
2023-09-01 James ProcterJAL-4124 add strategic newlines in matrix stringified... tree | commitdiff
2023-08-31 James ProcterJAL-4124 comment out incomplete test bits.. for now tree | commitdiff
2023-08-31 James ProcterJAL-4124 MappableContactMatrix equivalence and hashCode... tree | commitdiff
2023-08-21 James ProcterJAL-4062 a few more tests to check append honours disti... patch/JAL-4062_sort_and_merge_contiguousregions tree | commitdiff
2023-08-21 James ProcterJAL-4062 appendResult(seq,start,end) called by structur... tree | commitdiff
2023-08-18 Ben SoaresMerge branch 'feature/JAL-244_Automatically_adjust_left... tree | commitdiff
2023-08-11 Ben SoaresJAL-629 Much better way of dealing with list of filenam... tree | commitdiff
2023-08-10 Ben SoaresJAL-629 more tests for stdout tree | commitdiff
2023-08-10 Ben SoaresJAL-629 Change all stdout and stderr output to use... tree | commitdiff
2023-08-02 Ben SoaresJAL-244 Fix buglet with automatic change in id column... tree | commitdiff
2023-08-01 Ben SoaresJAL-244 More control of automatic idWidth adjustments... tree | commitdiff
2023-07-20 James ProcterJAL-3855 auto select clusters and fix up colouring... tree | commitdiff
2023-07-18 James ProcterMerge branch 'develop' into patch/JAL-3855_fixup_pae tree | commitdiff
2023-07-18 James ProcterJAL-4153 comments re patch incorrectly committed under... tree | commitdiff
2023-07-18 Ben SoaresJAL-4513 move comments tree | commitdiff
2023-07-18 Ben SoaresJAL-4513 now re-add the SwingUtilities.invokeAndWait... bug/JAL-4513_JvCacheableInputBoxTest_flaky_on_build_server tree | commitdiff
2023-07-18 James ProcterJAL-3855 JAL-4124 test checks asymmetric matrices are... tree | commitdiff
2023-07-18 Ben SoaresJAL-4513 reduce wait to invoke fail tree | commitdiff
2023-07-18 Ben SoaresJAL-4513 add a SwingUtilities.invokeAndWait() to see... tree | commitdiff
2023-07-17 James ProcterJAL-4217 move Commands.structureImageTest to testTask1 tree | commitdiff
2023-07-12 James ProcterJAL-4223 - test and patch to ensure numbering matches... tree | commitdiff
2023-07-07 James ProcterMerge branch 'patch/JAL-4195_cli_eps_export_npe' into... tree | commitdiff
2023-07-07 James ProcterMerge branch 'patch/JAL-4119_sifts_ftp_split' into... tree | commitdiff
2023-07-07 James ProcterMerge branch 'develop' into patch/JAL-4195_cli_eps_expo... patch/JAL-4195_cli_eps_export_npe tree | commitdiff
2023-07-07 James ProcterJAL-4195 add exception handling for all other CommandsT... tree | commitdiff
2023-07-07 James ProcterJAL-4221 update description when transferring annotatio... tree | commitdiff
2023-07-06 James ProcterJAL-2292 verify mixed case alignment actually aligns tree | commitdiff
2023-06-22 James ProcterJAL-2292 - ensure mapping is built for equal symbols... patch/JAL-2292_caseSensitivePAE tree | commitdiff
2023-06-08 James ProcterJAL-4196 structure view cli tests wait using new jalvie... tree | commitdiff
2023-06-07 James ProcterMerge branch 'patch/JAL-4195_cli_eps_export_npe' into... tree | commitdiff
2023-06-07 James ProcterJAL-4195 tidy up desktop instances after creating them tree | commitdiff
2023-06-01 Ben SoaresMerge branch 'develop' into improvement/JAL-4193_cl_arg... tree | commitdiff
2023-06-01 Ben SoaresJAL-629 changes merged in from develop fixed it. Delet... tree | commitdiff
2023-06-01 Ben SoaresMerge branch 'develop' into features/r2_11_2_alphafold... tree | commitdiff
2023-06-01 Ben SoaresJAL-629 fixing test EBIAlphaFoldTest.checkImportPAEToSt... tree | commitdiff
2023-06-01 Ben SoaresJAL-629 added data for test tree | commitdiff
2023-06-01 Ben SoaresJAL-4193 JAL-4194 sessionProperties layer in Cache... tree | commitdiff
2023-06-01 James ProcterMerge branch 'develop' into features/JAL-4134_use_annot... tree | commitdiff
2023-05-30 Ben SoaresJAL-4121 adjust test name tree | commitdiff
2023-05-30 Ben SoaresJAL-4121 slight refactoring of method name and added... tree | commitdiff
2023-05-29 James ProcterJAL-4134 JAL-2349 test & fixed implementation(ish)... tree | commitdiff
2023-05-29 James ProcterMerge branch 'develop' into features/JAL-4134_use_annot... tree | commitdiff
2023-05-27 Ben SoaresJAL-4121 Added a NPE check caught in tests. Added ... tree | commitdiff
2023-05-26 James ProcterMerge branch 'develop' into features/JAL-4134_use_annot... tree | commitdiff
2023-05-25 James ProcterJAL-4134 popup menu and annotation row property to... tree | commitdiff
2023-05-25 James ProcterJAL-2381 copy and paste sequence also copies contact... tree | commitdiff
2023-05-25 Ben SoaresJAL-4186 fixed a test tree | commitdiff
2023-05-23 Ben SoaresJAL-629 Added --structureimage code and formatting... tree | commitdiff
2023-05-22 James ProcterMerge branch 'JAL-1551_2_11_3_spotlett' into features... tree | commitdiff
2023-05-22 James ProcterJAL-1551 spotless tree | commitdiff
2023-05-19 James ProcterMerge branch 'develop' into features/JAL-4134_use_annot... tree | commitdiff
2023-05-19 James ProcterJAL-1551 spotlessApply tree | commitdiff
2023-05-19 James ProcterJAL-1551 spotlessApply tree | commitdiff
2023-05-18 James ProcterJAL-4134 colour by annotation needs distinct annotation... tree | commitdiff
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