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JAL-3066 AACon: pass the instance name of the service to the alignment analysis UI
[jalview.git]
/
test
/
jalview
/
2018-08-02
Jim Procter
JAL-3070 clearer test failed error message for REST...
tree
|
commitdiff
2018-07-31
bsoares
Stockholm file for test
tree
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commitdiff
2018-07-26
Jim Procter
JAL-3070 use ArgumentI in all public constructors,...
tree
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commitdiff
2018-07-23
Jim Procter
JAL-3070 pushed down JABAWS specific args for WsJobPara...
tree
|
commitdiff
2018-07-23
Jim Procter
Merge branch 'features/mchmmer' into merge/wsinterfaces...
tree
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commitdiff
2018-07-20
Jim Procter
JAL-3070 pull up hostURL and postURL to UIinfo and...
tree
|
commitdiff
2018-07-18
Jim Procter
Merge branch 'features/mchmmer' into features/mchmmer_m...
features/mchmmer_merge_JAL-1950
tree
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commitdiff
2018-07-17
bsoares
JAL-3065
tree
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commitdiff
2018-06-29
gmungoc
JAL-3049 JAL-2069 colour icon tooltip including by...
tree
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commitdiff
2018-06-26
Jim Procter
JAL-3035 - jalview-das is no more !
tree
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commitdiff
2018-06-07
gmungoc
JAL-2920 format/comment tidy
tree
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commitdiff
2018-06-07
gmungoc
JAL-2920 wrap description in <html/> if it includes...
tree
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commitdiff
2018-06-06
gmungoc
JAL-2920 unit tests for 3 or more original or variant...
tree
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commitdiff
2018-06-06
Jim Procter
Merge branch 'bug/JAL-2920_uniprotvariantfeature' into...
tree
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commitdiff
2018-06-06
Jim Procter
JAL-2920 don’t output variant/original sequence as...
tree
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commitdiff
2018-06-06
Jim Procter
JAL-1920 JAL-3017 use newline not <br/> in description...
tree
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commitdiff
2018-06-05
gmungoc
Merge branch 'develop' into features/mchmmer
tree
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commitdiff
2018-06-04
gmungoc
JAL-2808 update test for revised treatment of 'mixed...
tree
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commitdiff
2018-06-04
gmungoc
JAL-3019 correctly form toRange of 'traversed' MapList
tree
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commitdiff
2018-06-04
Jim Procter
JAL-3017 parse multiple variant elements for uniprot...
tree
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commitdiff
2018-06-02
Jim Procter
JAL-3017 parse multiple variant elements for uniprot...
tree
|
commitdiff
2018-05-31
Jim Procter
Merge branch 'spike/JAL-1950_hmmer3client' into feature...
tree
|
commitdiff
2018-05-31
Jim Procter
Merge branch 'develop' into spike/JAL-1950_hmmer3client
tree
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commitdiff
2018-05-29
gmungoc
JAL-3005 refactor updateRecentlyOpened to enable reuse
tree
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commitdiff
2018-05-29
Mungo Carstairs
JAL-2994 utility method to match a list of folder/file...
tree
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commitdiff
2018-05-28
gmungoc
JAL-2994 use pattern matches to search for chimera.exe
tree
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commitdiff
2018-05-28
gmungoc
Merge branch 'develop' into features/mchmmer
tree
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commitdiff
2018-05-28
gmungoc
Merge remote-tracking branch 'origin/releases/Release_2...
tree
|
commitdiff
2018-05-24
gmungoc
JAL-2997 additional tests
tree
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commitdiff
2018-05-23
gmungoc
JAL-2997 unit test
tree
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commitdiff
2018-05-21
gmungoc
JAL-2920 use HGVS notation for protein variant feature
tree
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commitdiff
2018-05-14
gmungoc
JAL-2711 removed unused and flaky utility method
tree
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commitdiff
2018-05-11
gmungoc
Merge branch 'develop' into features/mchmmer
tree
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commitdiff
2018-05-11
gmungoc
JAL-2986 additional asserts for SequenceCursor updates
tree
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commitdiff
2018-05-11
gmungoc
JAL-2986 failing test added
tree
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commitdiff
2018-05-10
Jim Procter
Merge branch 'bug/JAL-2920_uniprotvariantfeature' into...
tree
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commitdiff
2018-05-10
Jim Procter
JAL-2920 basic test for Description from features with...
tree
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commitdiff
2018-05-08
gmungoc
Merge branch 'develop' into features/mchmmer
tree
|
commitdiff
2018-05-07
Jim Procter
JAL-2321 patch test to ensure structures are actually...
patch/JAL-2321_addsecstrForDroppedPDBFile
tree
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commitdiff
2018-05-07
gmungoc
JAL-2808 ensure test setUp/tearDown alwaysRun
tree
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commitdiff
2018-05-07
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' into...
tree
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commitdiff
2018-05-07
gmungoc
JAL-1767 unit test for save and restore PCA
features/JAL-1767pcaInProject
tree
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commitdiff
2018-05-07
Jim Procter
JAL-2906 apply GPLv3 license source
tree
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commitdiff
2018-05-04
gmungoc
JAL-2965 graduate brightness on z-axis from centre...
tree
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commitdiff
2018-05-01
gmungoc
JAL-1767 include d and e vectors in Matrix.copy()
tree
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commitdiff
2018-04-30
gmungoc
JAL-2965 graduated sequence point colour from back...
tree
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commitdiff
2018-04-27
gmungoc
JAL-1767 refactoring and tidying of RotatableCanvas...
tree
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commitdiff
2018-04-26
gmungoc
JAL-2962 remove Change Parameters menu from PCA panel
tree
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commitdiff
2018-04-26
gmungoc
JAL-2962 option to offer BLOSUM62 for nucleotide PCA
tree
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commitdiff
2018-04-25
Jim Procter
Merge branch 'features/JAL-2944_openStructuresInSelecte...
tree
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commitdiff
2018-04-24
gmungoc
JAL-2956 unit test
tree
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commitdiff
2018-04-20
gmungoc
JAL-591 OptionBox FlowLayout, tweaks to wrapping of...
tree
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commitdiff
2018-04-18
gmungoc
Merge branch 'develop' into features/mchmmer
tree
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commitdiff
2018-04-18
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' into...
tree
|
commitdiff
2018-04-18
gmungoc
JAL-2593 render 'duplicate' features if transparency...
tree
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commitdiff
2018-04-17
gmungoc
JAL-2629 choice of hmm profile now a parameter not...
tree
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commitdiff
2018-04-17
Mungo Carstairs
JAL-2937 working Cygwin bash execution of hmmbuild...
tree
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commitdiff
2018-04-12
gmungoc
JAL-2223 don't add duplicate mappings to StructureSelec...
tree
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commitdiff
2018-04-12
gmungoc
JAL-2944 tidies for review comments
tree
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commitdiff
2018-04-06
Jim Procter
failing test for JAL-2223
tree
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commitdiff
2018-04-05
Jim Procter
JAL-2945 failing test for structure mapping
tree
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commitdiff
2018-04-05
Jim Procter
JAL-2945 formatting
tree
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commitdiff
2018-03-30
gmungoc
JAL-2599 MapList from HMM nodes to consensus dataset...
tree
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commitdiff
2018-03-30
gmungoc
JAL-2629 ensure hmm consensus sequence set on alignment...
tree
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commitdiff
2018-03-30
gmungoc
small tidy
tree
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commitdiff
2018-03-30
gmungoc
JAL-2938 revisions to implementation details
tree
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commitdiff
2018-03-30
gmungoc
JAL-2599 move utility method to MappingUtils
tree
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commitdiff
2018-03-30
gmungoc
JAL-2599 corrected test file name in unit test
tree
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commitdiff
2018-03-29
gmungoc
JAL-2907 test method renamed to match method name change
tree
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commitdiff
2018-03-29
gmungoc
JAL-2907 bug fix redone on HMMER branch
tree
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commitdiff
2018-03-28
gmungoc
JAL-1265 output all dbrefs in Stockholm (+tests) (...
tree
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commitdiff
2018-03-26
gmungoc
JAL-2939 pull up set/IsNormalise[HMM]SequenceLogo
tree
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commitdiff
2018-03-23
gmungoc
JAL-2938 extracted base class for Hmmer colour schems
tree
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commitdiff
2018-03-22
gmungoc
JAL-2929 unit test, tidy unused/unneeded fields/parameters
tree
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commitdiff
2018-03-21
Jim Procter
JAL-2754 reinstate PA import from bad conflict merge
tree
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commitdiff
2018-03-21
Jim Procter
Merge branch 'releases/Release_2_10_4_Branch' into...
tree
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commitdiff
2018-03-21
Jim Procter
JAL-2754 don’t use deprecated api for getting font...
tree
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commitdiff
2018-03-20
gmungoc
JAL-2629 InformationThread.findOrCreateAnnotation and...
tree
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commitdiff
2018-03-20
gmungoc
Merge branch 'develop' into features/mchmmer
tree
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commitdiff
2018-03-19
gmungoc
JAL-2620 parse genetic code tables from standard file...
tree
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commitdiff
2018-03-16
gmungoc
JAL-2620 alternative genetic code translation tables
tree
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commitdiff
2018-03-16
gmungoc
Merge remote-tracking branch 'origin/releases/Release_2...
tree
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commitdiff
2018-03-16
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2018-03-15
gmungoc
JAL-2893 enabling Get Crossreferences to ENSEMBLGENOMES
tree
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commitdiff
2018-03-14
gmungoc
JAL-2933 pass viewport in Finder constructor, find...
bug/JAL-2839findWithHidden
tree
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commitdiff
2018-03-14
gmungoc
JAL-2933 gui and applet Finder hold a FinderI per viewport
tree
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commitdiff
2018-03-13
gmungoc
JAL-2839 additional test case
tree
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commitdiff
2018-03-13
gmungoc
JAL-2839 refactored analysis.Finder and tests
tree
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commitdiff
2018-03-13
gmungoc
JAL-2839 addResult ignores duplicates
tree
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commitdiff
2018-03-09
gmungoc
JAL-2839 Finder refactoring prior to fixing the defect
tree
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commitdiff
2018-03-08
gmungoc
Merge remote-tracking branch 'origin/releases/Release_2...
merges/JAL-2906_update2_11_from_2_10_4
tree
|
commitdiff
2018-03-08
gmungoc
JAL-2885 tests updated for code changes
tree
|
commitdiff
2018-03-07
Jim Procter
Merge branch 'releases/Release_2_10_4_Branch' into...
tree
|
commitdiff
2018-03-07
gmungoc
JAL-2629 storage and lifecycle of alignment/group HMM...
tree
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commitdiff
2018-02-27
gmungoc
JAL-2668 method name change for clarity
tree
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commitdiff
2018-02-27
gmungoc
JAL-2717 JAL-2668 fixes to HMMER colour scheme display...
tree
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commitdiff
2018-02-27
Jim Procter
Merge branch 'feature/JAL-2759' into merge/JAL-2759_2104
tree
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commitdiff
2018-02-26
gmungoc
JAL-2599 test coverage and bug fixes for 'minimal file...
tree
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commitdiff
2018-02-23
gmungoc
JAL-2599 corrected case-insensitive symbol indexing
tree
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commitdiff
2018-02-23
Jim Procter
Merge branch 'features/JAL-2885UniprotHttps' into relea...
tree
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commitdiff
next