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Merge branch 'develop' into patch/JAL-3088_finalbracenotinrightplace
[jalview.git]
/
test
/
jalview
/
2023-11-01
James Procter
Merge branch 'patch/JAL-4281_idwidthandannotHeight_in_p...
tree
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commitdiff
2023-11-01
James Procter
JAL-4281 patch test so it passes on build server and...
patch/JAL-4281_idwidthandannotHeight_in_project
tree
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commitdiff
2023-11-01
James Procter
Merge branch 'feature/JAL-4315_fc_draganddrop' into...
tree
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commitdiff
2023-11-01
James Procter
Merge branch 'develop' into patch/JAL-4281_idwidthandan...
tree
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commitdiff
2023-11-01
James Procter
Merge branch 'patch/JAL-4260_fix_up_select_via_ruler_in...
tree
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commitdiff
2023-11-01
James Procter
JAL-4260 encapsulate logic for resolving nearest column...
patch/JAL-4260_fix_up_select_via_ruler_in_wrapped
tree
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commitdiff
2023-10-30
James Procter
JAL-4315 identify feature settings file from its xml...
tree
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commitdiff
2023-10-23
James Procter
JAL-4311 failing test case for 3d-beacons epas1_human...
tree
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commitdiff
2023-10-23
James Procter
Merge branch 'develop' into improvement/JAL-4124_dont_d...
tree
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commitdiff
2023-10-23
James Procter
JAL-4308 reduce number of refs to 5, always have canoni...
tree
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commitdiff
2023-10-22
James Procter
JAL-4153 avoid use of invokeAndWait, increase wait...
tree
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commitdiff
2023-10-19
Ben Soares
JAL-4305 Isolate and unify the Jalview object from...
tree
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commitdiff
2023-10-03
James Procter
JAL-4217 move CommandsTest to testTask3 involving struc...
tree
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commitdiff
2023-10-03
James Procter
Merge branch 'patch/JAL-4062_sort_and_merge_contiguousr...
tree
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commitdiff
2023-10-01
James Procter
JAL-4090 JAL-4291 disable failing test and note as...
tree
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commitdiff
2023-10-01
James Procter
JAL-244 attempt to fix broken test - still needs to...
tree
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commitdiff
2023-10-01
James Procter
JAL-244 JAL-4091 FIXME for JAL-3362 patch testCalculate...
tree
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commitdiff
2023-10-01
James Procter
JAL-4160 update args used in test suite for new CLI...
tree
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commitdiff
2023-09-29
James Procter
JAL-4153 move JvCacheableInputBoxTest to testTask2
tree
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commitdiff
2023-09-28
James Procter
JAL-3858 improved contactInterval computation and added...
tree
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commitdiff
2023-09-26
James Procter
JAL-3858 JAL-4090 avoid NPE when given out of bound...
tree
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commitdiff
2023-09-20
James Procter
JAL-4217 - try to invokeAndWait on Desktop.closeAll...
reviews/merge/JAL-4262+JAL-4265+JAL-4269+JAL-4274+JAL-4277+JAL-4285
tree
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commitdiff
2023-09-20
James Procter
JAL-4274 fix test failure message typo
tree
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commitdiff
2023-09-16
Ben Soares
JAL-629 Fix a test and omit an incorrect error message...
improvement/JAL-4269_reduce_variants_of_common_subvalue_parameters
tree
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commitdiff
2023-09-16
Ben Soares
JAL-4269 Now using --width, --height, --scale for both...
tree
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commitdiff
2023-09-13
Ben Soares
JAL-4274 comments to help follow the tests
feature/JAL-4274_configurable_bitmap_export_preferences
tree
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commitdiff
2023-09-13
Ben Soares
JAL-4274 Tests for BIS defaults and overrides
tree
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commitdiff
2023-09-13
Ben Soares
JAL-4274 Use Cache BITMAP_* if no other image restricti...
tree
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commitdiff
2023-09-12
Ben Soares
JAL-4277 No longer using getCanonicalPath() for parent...
tree
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commitdiff
2023-09-12
Ben Soares
JAL-629 updated tests
tree
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commitdiff
2023-09-11
Ben Soares
JAL-4277 --mkdirs with cautious refusal for paths with ..
tree
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commitdiff
2023-09-08
James Procter
JAL-4281 store/restore ID width and manual adjustment...
tree
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commitdiff
2023-09-07
Ben Soares
Merge branch 'develop' into bug/JAL-4277_dirname_substi...
tree
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commitdiff
2023-09-07
Ben Soares
JAL-4277 fixed and improved tests
tree
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commitdiff
2023-09-07
Ben Soares
JAL-4277 Corrected choice of all or last opened linkedI...
tree
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commitdiff
2023-09-07
James Procter
JAL-4090 JAL-4160 JAL-4274 image export dimensions...
tree
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commitdiff
2023-09-01
James Procter
JAL-4124 add strategic newlines in matrix stringified...
tree
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commitdiff
2023-08-31
James Procter
JAL-4124 comment out incomplete test bits.. for now
tree
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commitdiff
2023-08-31
James Procter
JAL-4124 MappableContactMatrix equivalence and hashCode...
tree
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commitdiff
2023-08-21
James Procter
JAL-4062 a few more tests to check append honours disti...
patch/JAL-4062_sort_and_merge_contiguousregions
tree
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commitdiff
2023-08-21
James Procter
JAL-4062 appendResult(seq,start,end) called by structur...
tree
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commitdiff
2023-08-18
Ben Soares
Merge branch 'feature/JAL-244_Automatically_adjust_left...
tree
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commitdiff
2023-08-11
Ben Soares
JAL-629 Much better way of dealing with list of filenam...
tree
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commitdiff
2023-08-10
Ben Soares
JAL-629 more tests for stdout
tree
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commitdiff
2023-08-10
Ben Soares
JAL-629 Change all stdout and stderr output to use...
tree
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commitdiff
2023-08-02
Ben Soares
JAL-244 Fix buglet with automatic change in id column...
tree
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commitdiff
2023-08-01
Ben Soares
JAL-244 More control of automatic idWidth adjustments...
tree
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commitdiff
2023-07-20
James Procter
JAL-3855 auto select clusters and fix up colouring...
tree
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commitdiff
2023-07-18
James Procter
Merge branch 'develop' into patch/JAL-3855_fixup_pae
tree
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commitdiff
2023-07-18
James Procter
JAL-4153 comments re patch incorrectly committed under...
tree
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commitdiff
2023-07-18
Ben Soares
JAL-4513 move comments
tree
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commitdiff
2023-07-18
Ben Soares
JAL-4513 now re-add the SwingUtilities.invokeAndWait...
bug/JAL-4513_JvCacheableInputBoxTest_flaky_on_build_server
tree
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commitdiff
2023-07-18
James Procter
JAL-3855 JAL-4124 test checks asymmetric matrices are...
tree
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commitdiff
2023-07-18
Ben Soares
JAL-4513 reduce wait to invoke fail
tree
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commitdiff
2023-07-18
Ben Soares
JAL-4513 add a SwingUtilities.invokeAndWait() to see...
tree
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commitdiff
2023-07-17
James Procter
JAL-4217 move Commands.structureImageTest to testTask1
tree
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commitdiff
2023-07-12
James Procter
JAL-4223 - test and patch to ensure numbering matches...
tree
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commitdiff
2023-07-07
James Procter
Merge branch 'patch/JAL-4195_cli_eps_export_npe' into...
tree
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commitdiff
2023-07-07
James Procter
Merge branch 'patch/JAL-4119_sifts_ftp_split' into...
tree
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commitdiff
2023-07-07
James Procter
Merge branch 'develop' into patch/JAL-4195_cli_eps_expo...
patch/JAL-4195_cli_eps_export_npe
tree
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commitdiff
2023-07-07
James Procter
JAL-4195 add exception handling for all other CommandsT...
tree
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commitdiff
2023-07-07
James Procter
JAL-4221 update description when transferring annotatio...
tree
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commitdiff
2023-07-06
James Procter
JAL-2292 verify mixed case alignment actually aligns
tree
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commitdiff
2023-06-22
James Procter
JAL-2292 - ensure mapping is built for equal symbols...
patch/JAL-2292_caseSensitivePAE
tree
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commitdiff
2023-06-08
James Procter
JAL-4196 structure view cli tests wait using new jalvie...
tree
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commitdiff
2023-06-07
James Procter
Merge branch 'patch/JAL-4195_cli_eps_export_npe' into...
tree
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commitdiff
2023-06-07
James Procter
JAL-4195 tidy up desktop instances after creating them
tree
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commitdiff
2023-06-01
Ben Soares
Merge branch 'develop' into improvement/JAL-4193_cl_arg...
tree
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commitdiff
2023-06-01
Ben Soares
JAL-629 changes merged in from develop fixed it. Delet...
tree
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commitdiff
2023-06-01
Ben Soares
Merge branch 'develop' into features/r2_11_2_alphafold...
tree
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commitdiff
2023-06-01
Ben Soares
JAL-629 fixing test EBIAlphaFoldTest.checkImportPAEToSt...
tree
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commitdiff
2023-06-01
Ben Soares
JAL-629 added data for test
tree
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commitdiff
2023-06-01
Ben Soares
JAL-4193 JAL-4194 sessionProperties layer in Cache...
tree
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commitdiff
2023-06-01
James Procter
Merge branch 'develop' into features/JAL-4134_use_annot...
tree
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commitdiff
2023-05-30
Ben Soares
JAL-4121 adjust test name
tree
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commitdiff
2023-05-30
Ben Soares
JAL-4121 slight refactoring of method name and added...
tree
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commitdiff
2023-05-29
James Procter
JAL-4134 JAL-2349 test & fixed implementation(ish)...
tree
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commitdiff
2023-05-29
James Procter
Merge branch 'develop' into features/JAL-4134_use_annot...
tree
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commitdiff
2023-05-27
Ben Soares
JAL-4121 Added a NPE check caught in tests. Added ...
tree
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commitdiff
2023-05-26
James Procter
Merge branch 'develop' into features/JAL-4134_use_annot...
tree
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commitdiff
2023-05-25
James Procter
JAL-4134 popup menu and annotation row property to...
tree
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commitdiff
2023-05-25
James Procter
JAL-2381 copy and paste sequence also copies contact...
tree
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commitdiff
2023-05-25
Ben Soares
JAL-4186 fixed a test
tree
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commitdiff
2023-05-23
Ben Soares
JAL-629 Added --structureimage code and formatting...
tree
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commitdiff
2023-05-22
James Procter
Merge branch 'JAL-1551_2_11_3_spotlett' into features...
tree
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commitdiff
2023-05-22
James Procter
JAL-1551 spotless
tree
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commitdiff
2023-05-19
James Procter
Merge branch 'develop' into features/JAL-4134_use_annot...
tree
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commitdiff
2023-05-19
James Procter
JAL-1551 spotlessApply
tree
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commitdiff
2023-05-19
James Procter
JAL-1551 spotlessApply
tree
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commitdiff
2023-05-18
James Procter
JAL-4134 colour by annotation needs distinct annotation...
tree
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commitdiff
2023-05-18
James Procter
JAL-4134 column grouping model and methods moved to...
tree
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commitdiff
2023-05-18
Ben Soares
JAL-629 Added 'Type' to args and argvalues
tree
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commitdiff
2023-05-17
Ben Soares
JAL-629 Tidy up tests and replaced methods before merge...
tree
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commitdiff
2023-05-17
Ben Soares
JAL-629 delete stray files
tree
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commitdiff
2023-05-17
Ben Soares
Merge branch 'develop' into features/r2_11_2_alphafold...
tree
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commitdiff
2023-05-17
James Procter
JAL-4184 failing test for description export and re...
tree
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commitdiff
2023-05-15
James Procter
JAL-4182 failing test
tree
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commitdiff
2023-05-14
James Procter
JAL-2349 fix up tests for Java 11 compatibility and...
tree
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commitdiff
2023-05-14
James Procter
JAL-4134 add tree distance engine test to functional
tree
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commitdiff
2023-05-14
James Procter
JAL-2349 store/restore mappable contact matrix in proje...
tree
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commitdiff
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