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JAL-3003 remove redundant call to drawSelectionGroup
[jalview.git]
/
test
/
jalview
/
2018-08-28
gmungoc
JAL-3087 include full alignment height in repeating...
tree
|
commitdiff
2018-06-07
gmungoc
JAL-2920 format/comment tidy
tree
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commitdiff
2018-06-07
gmungoc
JAL-2920 wrap description in <html/> if it includes...
tree
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commitdiff
2018-06-06
gmungoc
JAL-2920 unit tests for 3 or more original or variant...
tree
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commitdiff
2018-06-06
Jim Procter
Merge branch 'bug/JAL-2920_uniprotvariantfeature' into...
tree
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commitdiff
2018-06-06
Jim Procter
JAL-2920 don’t output variant/original sequence as...
tree
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commitdiff
2018-06-06
Jim Procter
JAL-1920 JAL-3017 use newline not <br/> in description...
tree
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commitdiff
2018-06-04
Jim Procter
JAL-3017 parse multiple variant elements for uniprot...
tree
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commitdiff
2018-06-02
Jim Procter
JAL-3017 parse multiple variant elements for uniprot...
tree
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commitdiff
2018-05-24
gmungoc
JAL-2997 additional tests
tree
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commitdiff
2018-05-23
gmungoc
JAL-2997 unit test
tree
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commitdiff
2018-05-21
gmungoc
JAL-2920 use HGVS notation for protein variant feature
tree
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commitdiff
2018-05-10
Jim Procter
Merge branch 'bug/JAL-2920_uniprotvariantfeature' into...
tree
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commitdiff
2018-05-10
Jim Procter
JAL-2920 basic test for Description from features with...
tree
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commitdiff
2018-05-07
Jim Procter
JAL-2321 patch test to ensure structures are actually...
patch/JAL-2321_addsecstrForDroppedPDBFile
tree
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commitdiff
2018-05-07
Jim Procter
JAL-2906 apply GPLv3 license source
tree
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commitdiff
2018-04-25
Jim Procter
Merge branch 'features/JAL-2944_openStructuresInSelecte...
tree
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commitdiff
2018-04-18
gmungoc
JAL-2593 render 'duplicate' features if transparency...
tree
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commitdiff
2018-04-12
gmungoc
JAL-2223 don't add duplicate mappings to StructureSelec...
tree
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commitdiff
2018-04-12
gmungoc
JAL-2944 tidies for review comments
tree
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commitdiff
2018-04-06
Jim Procter
failing test for JAL-2223
tree
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commitdiff
2018-04-05
Jim Procter
JAL-2945 failing test for structure mapping
tree
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commitdiff
2018-04-05
Jim Procter
JAL-2945 formatting
tree
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commitdiff
2018-03-22
gmungoc
JAL-2929 unit test, tidy unused/unneeded fields/parameters
tree
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commitdiff
2018-03-21
Jim Procter
JAL-2754 don’t use deprecated api for getting font...
tree
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commitdiff
2018-03-15
gmungoc
JAL-2893 enabling Get Crossreferences to ENSEMBLGENOMES
tree
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commitdiff
2018-03-08
gmungoc
JAL-2885 tests updated for code changes
tree
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commitdiff
2018-02-27
Jim Procter
Merge branch 'feature/JAL-2759' into merge/JAL-2759_2104
tree
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commitdiff
2018-02-23
Jim Procter
Merge branch 'features/JAL-2885UniprotHttps' into relea...
tree
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commitdiff
2018-02-22
Jim Procter
Merge branch 'bug/JAL-2666' into releases/Release_2_10_...
tree
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commitdiff
2018-02-13
Jim Procter
JAL-2780 scan all test IDs before testing and reporting...
bugs/JAL-2780_JAL-2781_pdbnegativenums
tree
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commitdiff
2018-02-13
Jim Procter
JAL-2780 SequenceI.findFeatures takes column numbers...
tree
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commitdiff
2018-02-13
Jim Procter
JAL-2781 ensure Trim is disabled before test starts
tree
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commitdiff
2018-02-13
Jim Procter
JAL-2781 report exactly which residues do not receive...
tree
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commitdiff
2018-02-12
Jim Procter
JAL-2780 JAL-2781 extra column in mapping array
tree
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commitdiff
2018-02-12
Jim Procter
JAL-2904 JAL-2780 JAL-2781 update JmolCommandsTest...
tree
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commitdiff
2018-02-12
Jim Procter
JAL-2780 use value of ’UNASSIGNED’ constant in assert...
tree
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commitdiff
2018-02-12
Jim Procter
JAL-2904 replaced assert for (getEnd()-getStart()+1...
tree
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commitdiff
2018-02-11
Jim Procter
JAL-2781 fix test data for full length annotation
tree
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commitdiff
2018-02-09
gmungoc
JAL-2789 avoid using transcript (with no UTR) as CDS...
bug/JAL-2666
tree
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commitdiff
2018-02-07
Jim Procter
JAL-2780 JAL-2781 run sequentially and ensure windows...
tree
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commitdiff
2018-02-07
Jim Procter
JAL-2780 JAL-2891 clear all windows always beforeTest...
tree
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commitdiff
2018-02-07
Jim Procter
JAL-2780 JAL-2781 first pass at failing test for incorr...
tree
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commitdiff
2018-02-07
Jim Procter
JAL-2780 JAL-2781 JAL-2902 refactored helper method...
tree
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commitdiff
2018-02-06
kiramt
Merge branch 'develop' into feature/JAL-2759
feature/JAL-2759
tree
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commitdiff
2018-02-05
Jim Procter
JAL-2780 JAL-2781 (failing) test comparing location...
tree
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commitdiff
2018-02-05
Jim Procter
JAL-2780 JAL-2781 test AlignmentI.findAnnotations locat...
tree
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commitdiff
2018-02-05
Jim Procter
JAL-2780 JAL-2781 - patch and first test for AlignmentI...
tree
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commitdiff
2018-02-05
kiramt
JAL-2759 Rename getBoundedStartIterator
tree
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commitdiff
2018-02-05
kiramt
JAL-2759 Changes to StartRegionIterator after review
tree
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commitdiff
2018-01-31
kiramt
JAL-2759 Rationalise VisibleColsIterator and HiddenCols...
tree
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commitdiff
2018-01-31
kiramt
JAL-2759 test renaming
tree
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commitdiff
2018-01-31
kiramt
JAL-2759 minor refactor to hiding bitsets
tree
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commitdiff
2018-01-30
kiramt
JAL-2759 Add missing hiddenColumns empty check
tree
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commitdiff
2018-01-30
kiramt
JAL-2759 updateForDeletedRegion no longer needed
tree
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commitdiff
2018-01-30
kiramt
JAL-2759 Rationalising hidden cols cursor, and sorting...
tree
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commitdiff
2018-01-30
kiramt
JAL-2759 Additional tests and tweaks to numColumns...
tree
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commitdiff
2018-01-30
kiramt
JAL-2759 Keep numColumns up to date
tree
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commitdiff
2018-01-29
kiramt
Merge branch 'feature/JAL-2759' of https://source.jalvi...
tree
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commitdiff
2018-01-29
kiramt
JAL-2759 Combine findRegionForColumn code in HiddenColu...
tree
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commitdiff
2018-01-29
gmungoc
JAL-1270 testPadGaps() added
tree
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commitdiff
2018-01-29
kiramt
JAL-2759 make a new cursor instead of resetting, update...
tree
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commitdiff
2018-01-26
Jim Procter
Merge branch 'releases/Release_2_10_3_Branch' into...
tree
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commitdiff
2018-01-22
kiramt
JAL-2579 Moved locateVisibleStartOfSequence to Sequence...
tree
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commitdiff
2018-01-19
kiramt
JAL-2759 Changes to getVisibleSequenceStrings after...
tree
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commitdiff
2018-01-19
kiramt
JAL-2759 Moved propagateInsertions out of HiddenColumns
tree
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commitdiff
2018-01-19
kiramt
JAL-2759 Update to getVisibleStartAndEndIndex after...
tree
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commitdiff
2018-01-18
kiramt
JAL-2759 change subtractVisibleColumns and removal...
tree
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commitdiff
2018-01-18
kiramt
JAL-2759 Updated test
tree
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commitdiff
2018-01-18
kiramt
JAL-2759 unit tests (incomplete)
tree
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commitdiff
2018-01-17
gmungoc
JAL-2679 case-insensitive comparison of query and retri...
tree
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commitdiff
2018-01-16
kiramt
JAL-2759 setup hideBitSet over range for hideInsertions
tree
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commitdiff
2018-01-16
gmungoc
JAL-2885 uniprot now https, uniprot/ensembl/pfam/xfam...
tree
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commitdiff
2018-01-16
kiramt
JAL-2759 Unit test for PopupMenu hideInsertions code
tree
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commitdiff
2018-01-16
kiramt
JAL-2759 Moved alignment annotation code out of HiddenC...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Rename hideInsertionsFor to hideList, after...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Refactor of hideInsertionsFor after review
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Minor doc and naming changes
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Rename findColumnPosition and adjustForHiddenC...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Comments and renaming for has(Many)HiddenColum...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Tidy up javadoc and naming in HiddenColumnsCur...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Updated HiddenColumnsTest::testIsVisible follo...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Update to getHiddenBoundaryRight + unit test...
tree
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commitdiff
2018-01-12
kiramt
JAL-2886 trivial unit test fix
tree
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commitdiff
2017-12-19
Jim Procter
JAL-2880 disabled non-functional test - Jmol parser...
tree
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commitdiff
2017-12-01
Jim Procter
Merge branch 'develop' into bugs/JAL-2780_JAL-2781_pdbn...
tree
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commitdiff
2017-11-28
Jim Procter
Merge branch 'bug/JAL-2859_uniprottowrongpdbid' into...
tree
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commitdiff
2017-11-28
Jim Procter
Merge branch 'bug/JAL-2740' into develop
tree
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commitdiff
2017-11-27
Jim Procter
JAL-2859 failing test demonstrating sequences with...
tree
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commitdiff
2017-11-22
kiramt
JAL-2759 performance improvements to hideColumns
tree
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commitdiff
2017-11-22
kiramt
JAL-2759 HiddenColumns test polishing
tree
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commitdiff
2017-11-21
kiramt
JAL-2759 corrected old getVisibleBlocksIterator calls...
tree
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commitdiff
2017-11-21
kiramt
JAL-2759 Remove getVisibleBlocksIterator call
tree
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commitdiff
2017-11-21
kiramt
Merge branch 'develop' into feature/JAL-2759
tree
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commitdiff
2017-11-21
kiramt
JAL-2759 BoundedStartRegionIterator test
tree
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commitdiff
2017-11-21
kiramt
JAL-2759 unit tests for VisibleContigsIterator
tree
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commitdiff
2017-11-20
kiramt
JAL-2759 improvements to speed up synchronisation;...
tree
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commitdiff
2017-11-17
Jim Procter
Merge branch 'bug/JAL-2831' into develop
tree
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commitdiff
2017-11-17
kiramt
JAL-2759 tidy
tree
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commitdiff
2017-11-17
kiramt
JAL-2759 Update tests
tree
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commitdiff
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