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JAL-2759 use right iterator for getVisibleColsIterator
[jalview.git]
/
test
/
jalview
/
2018-01-31
kiramt
JAL-2759 Rationalise VisibleColsIterator and HiddenCols...
tree
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commitdiff
2018-01-31
kiramt
JAL-2759 test renaming
tree
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commitdiff
2018-01-31
kiramt
JAL-2759 minor refactor to hiding bitsets
tree
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commitdiff
2018-01-30
kiramt
JAL-2759 Add missing hiddenColumns empty check
tree
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commitdiff
2018-01-30
kiramt
JAL-2759 updateForDeletedRegion no longer needed
tree
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commitdiff
2018-01-30
kiramt
JAL-2759 Rationalising hidden cols cursor, and sorting...
tree
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commitdiff
2018-01-30
kiramt
JAL-2759 Additional tests and tweaks to numColumns...
tree
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commitdiff
2018-01-30
kiramt
JAL-2759 Keep numColumns up to date
tree
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commitdiff
2018-01-29
kiramt
Merge branch 'feature/JAL-2759' of https://source.jalvi...
tree
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commitdiff
2018-01-29
kiramt
JAL-2759 Combine findRegionForColumn code in HiddenColu...
tree
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commitdiff
2018-01-29
gmungoc
JAL-1270 testPadGaps() added
tree
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commitdiff
2018-01-29
kiramt
JAL-2759 make a new cursor instead of resetting, update...
tree
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commitdiff
2018-01-22
kiramt
JAL-2579 Moved locateVisibleStartOfSequence to Sequence...
tree
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commitdiff
2018-01-19
kiramt
JAL-2759 Changes to getVisibleSequenceStrings after...
tree
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commitdiff
2018-01-19
kiramt
JAL-2759 Moved propagateInsertions out of HiddenColumns
tree
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commitdiff
2018-01-19
kiramt
JAL-2759 Update to getVisibleStartAndEndIndex after...
tree
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commitdiff
2018-01-18
kiramt
JAL-2759 change subtractVisibleColumns and removal...
tree
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commitdiff
2018-01-18
kiramt
JAL-2759 Updated test
tree
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commitdiff
2018-01-18
kiramt
JAL-2759 unit tests (incomplete)
tree
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commitdiff
2018-01-16
kiramt
JAL-2759 setup hideBitSet over range for hideInsertions
tree
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commitdiff
2018-01-16
kiramt
JAL-2759 Unit test for PopupMenu hideInsertions code
tree
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commitdiff
2018-01-16
kiramt
JAL-2759 Moved alignment annotation code out of HiddenC...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Rename hideInsertionsFor to hideList, after...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Refactor of hideInsertionsFor after review
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Minor doc and naming changes
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Rename findColumnPosition and adjustForHiddenC...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Comments and renaming for has(Many)HiddenColum...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Tidy up javadoc and naming in HiddenColumnsCur...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Updated HiddenColumnsTest::testIsVisible follo...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Update to getHiddenBoundaryRight + unit test...
tree
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commitdiff
2017-11-22
kiramt
JAL-2759 performance improvements to hideColumns
tree
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commitdiff
2017-11-22
kiramt
JAL-2759 HiddenColumns test polishing
tree
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commitdiff
2017-11-21
kiramt
JAL-2759 corrected old getVisibleBlocksIterator calls...
tree
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commitdiff
2017-11-21
kiramt
JAL-2759 Remove getVisibleBlocksIterator call
tree
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commitdiff
2017-11-21
kiramt
Merge branch 'develop' into feature/JAL-2759
tree
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commitdiff
2017-11-21
kiramt
JAL-2759 BoundedStartRegionIterator test
tree
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commitdiff
2017-11-21
kiramt
JAL-2759 unit tests for VisibleContigsIterator
tree
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commitdiff
2017-11-20
kiramt
JAL-2759 improvements to speed up synchronisation;...
tree
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commitdiff
2017-11-17
Jim Procter
Merge branch 'bug/JAL-2831' into develop
tree
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commitdiff
2017-11-17
kiramt
JAL-2759 tidy
tree
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commitdiff
2017-11-17
kiramt
JAL-2759 Update tests
tree
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commitdiff
2017-11-17
kiramt
JAL-2759 Convert reveal to use cursor
tree
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commitdiff
2017-11-17
kiramt
JAL-2759 HiddenColumnsCursor tests
tree
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commitdiff
2017-11-16
Jim Procter
Merge branch 'bug/JAL-2829deleteCharsWithGaps' into...
tree
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commitdiff
2017-11-14
kiramt
JAL-2831 tidies and tests
tree
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commitdiff
2017-11-14
Jim Procter
JAL-2758 update uniprot retrieval test
tree
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commitdiff
2017-11-14
kiramt
Merge branch 'imp/JAL-2774' into bug/JAL-2831
tree
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commitdiff
2017-11-13
Jim Procter
Merge branch 'features/JAL-2758_shorteruniprot' into...
tree
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commitdiff
2017-11-13
kiramt
JAL-2759 convert findColumnPosition to use cursor
tree
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commitdiff
2017-11-10
gmungoc
JAL-2829 fixes and unit tests
bug/JAL-2829deleteCharsWithGaps
tree
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commitdiff
2017-11-10
gmungoc
JAL-2829 unit tests for failing cases
tree
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commitdiff
2017-11-08
kiramt
Merge branch 'develop' into feature/JAL-2759
tree
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commitdiff
2017-11-08
Jim Procter
Merge branch 'develop' into bug/JAL-2225mapMultipleChains
tree
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commitdiff
2017-10-31
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-10-26
Jim Procter
Merge branch 'features/JAL-2685pairwiseSeqLimits' into...
tree
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commitdiff
2017-10-26
Jim Procter
JAL-2392 test asserts for progressbar creation on the...
tree
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commitdiff
2017-10-25
Jim Procter
Merge branch 'bug/JAL-2617mappedStopCodon' into develop
tree
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commitdiff
2017-10-25
Jim Procter
Merge branch 'bug/JAL-2667mouseWheelWrapped' into develop
tree
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commitdiff
2017-10-25
Jim Procter
JAL-2727 add not to Test failed message recommending...
tree
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commitdiff
2017-10-25
Jim Procter
Merge branch 'bug/JAL-2727closeAllFreeMemory' into...
tree
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commitdiff
2017-10-25
Jim Procter
Merge branch 'bug/JAL-2392_deadlockonpdbdisplay' into...
tree
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commitdiff
2017-10-24
gmungoc
JAL-2787 set start/end seq explicitly for test
tree
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commitdiff
2017-10-23
Jim Procter
Merge branch 'bug/JAL-2609attemptedmerge' into develop
tree
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commitdiff
2017-10-23
Jim Procter
Merge branch 'bug/JAL-2739' into develop
tree
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commitdiff
2017-10-23
Jim Procter
Merge branch 'bug/JAL-2682parseId' into develop
tree
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commitdiff
2017-10-23
Jim Procter
Merge branch 'bug/JAL-2253' into develop
tree
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commitdiff
2017-10-20
gmungoc
JAL-2253 pull up constant, additional unit test
bug/JAL-2253
tree
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commitdiff
2017-10-19
kiramt
Merge branch 'develop' into bug/JAL-2609attemptedmerge
tree
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commitdiff
2017-10-17
Jim Procter
JAL-2777 test for the whitespace chain
tree
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commitdiff
2017-10-17
Jim Procter
JAL-2481 test correct behaviour of findFeatureColour...
tree
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commitdiff
2017-10-13
kiramt
JAL-2774 Created single event for update to both start...
tree
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commitdiff
2017-10-11
gmungoc
JAL-2609 tests updated for revised label width
tree
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commitdiff
2017-10-11
gmungoc
JAL-2772 check array bounds for sequence access
bug/JAL-2772pdbArrayBounds
tree
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commitdiff
2017-10-11
gmungoc
JAL-2225 updates for review comments, Checkstyle
tree
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commitdiff
2017-10-11
gmungoc
Merge branch 'bug/JAL-2742' into develop
tree
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commitdiff
2017-10-11
gmungoc
JAL-2742 set HiddenColumns null for no hidden coluns...
tree
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commitdiff
2017-10-11
kiramt
JAL-2742 test updates following review
tree
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commitdiff
2017-10-11
kiramt
JAL-2742 minor test updates following review
tree
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commitdiff
2017-10-10
kiramt
Merge remote-tracking branch 'origin/features/JAL-2609f...
tree
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commitdiff
2017-10-10
Jim Procter
Merge branch 'codereviews/JAL-1990_IProgressIndicator_j...
tree
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commitdiff
2017-10-09
gmungoc
JAL-2523 basic sleep and retry (3 times) on 429 respons...
features/JAL-2523httpRetries
tree
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commitdiff
2017-10-09
gmungoc
JAL-2523 convenience method to get model organisms
tree
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commitdiff
2017-10-06
Jim Procter
JAL-2758 flag and tests for omitting uniprot accession...
features/JAL-2758_shorteruniprot
tree
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commitdiff
2017-10-06
kiramt
JAL-2674 Last moves to iterators
tree
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commitdiff
2017-10-04
kiramt
JAL-2674 more adjustments to locateVisibleBoundsOfSequence
tree
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commitdiff
2017-10-04
kiramt
JAL-2674 Simplify locateVisibleBoundsOfSequence
tree
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commitdiff
2017-10-03
kiramt
JAL-2647 unit test
tree
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commitdiff
2017-10-03
kiramt
JAL-2674 testing
tree
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commitdiff
2017-09-29
Jim Procter
JAL-2748 JAL-2745 remove uniprot from EBI fetch client...
tree
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commitdiff
2017-09-29
Jim Procter
JAL-2745 patch tests for https
tree
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commitdiff
2017-09-29
Jim Procter
JAL-2748 JAL-2745 remove uniprot from EBI fetch client...
tree
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commitdiff
2017-09-29
Jim Procter
JAL-2745 patch tests for https
tree
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commitdiff
2017-09-29
kiramt
JAL-2674 Tidies
tree
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commitdiff
2017-09-29
kiramt
JAL-2674 finish with iterators for now
tree
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commitdiff
2017-09-29
kiramt
JAL=2674 Removed getHiddenColumnsCopy
tree
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commitdiff
2017-09-29
kiramt
JAL-2674 reverted attempt at visible regions iterator
tree
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commitdiff
2017-09-28
kiramt
JAL-2647 more iterators
tree
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commitdiff
2017-09-27
kiramt
JAL-2674 Removing most calls to getHiddenColumnsCopy
tree
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commitdiff
2017-09-26
kiramt
JAL-2742 uncomment test
tree
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commitdiff
2017-09-26
kiramt
JAL-2674 uncomment test
tree
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commitdiff
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