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JAL-3829 ensure unmock the FTS PDB and TDB clients after mocking for a test
[jalview.git]
/
test
/
2020-03-16
gmungoc
JAL-3551 the correct PyMOL colour by chain command
tree
|
commitdiff
2020-03-13
gmungoc
JAL-3551 working proof of concept of Jalview driving...
tree
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commitdiff
2020-03-09
gmungoc
Merge branch 'develop' into feature/JAL-2422ChimeraX
tree
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commitdiff
2020-03-09
gmungoc
JAL-3528 unit tests added for failed lookup, Javadoc
tree
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commitdiff
2020-03-06
gmungoc
JAL-3187 unit test for findComplementFeaturesAtResidue
tree
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commitdiff
2020-03-06
gmungoc
Merge branch 'feature/JAL-3468featureDescriptionEllipsi...
tree
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commitdiff
2020-03-06
gmungoc
JAL-3468 i18n and additional unit tests
feature/JAL-3468featureDescriptionEllipsis
tree
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commitdiff
2020-03-06
Ben Soares
JAL-3529 improved regex in Stockholm UNIPROT accession...
tree
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commitdiff
2020-03-04
Ben Soares
JAL-3468 Fixed tests and added test for max-length...
tree
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commitdiff
2020-03-03
gmungoc
JAL-3518 more pull up / test coverage of structure...
tree
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commitdiff
2020-02-28
gmungoc
JAL-3518 basic refactoring / pull up of superposeStruct...
tree
|
commitdiff
2020-02-27
Jim Procter
JAL-3412 patch for failing test
tree
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commitdiff
2020-02-27
Jim Procter
Merge branch 'bug/JAL-3412idWidthDiscrepancy' into...
bug/JAL-3412idWidthDiscrepancy
tree
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commitdiff
2020-02-27
Jim Procter
Merge branch 'bug/JAL-3296changeStartInvalidateCursor...
tree
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commitdiff
2020-02-21
gmungoc
JAL-3518 more extraction of ChimeraX commands as overrides
tree
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commitdiff
2020-02-20
gmungoc
JAL-2422 pull-up refactoring of structure commands...
tree
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commitdiff
2020-02-18
Ben Soares
JAL-3449 merge from develop
tree
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commitdiff
2020-02-18
Jim Procter
JAL-3529 test for AC <Uniprot/EMBL> rather than DR...
tree
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commitdiff
2020-02-18
Jim Procter
JAL-3529 assert Uniprot refs must be provided as primar...
tree
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commitdiff
2020-02-17
Ben Soares
JAL-3341 Increase number of lines looked at by test...
tree
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commitdiff
2020-02-17
Jim Procter
JAL-3536 failing test and test data
tree
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commitdiff
2020-02-14
Jim Procter
JAL-3531 failing test
tree
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commitdiff
2020-02-14
Jim Procter
JAL-3529 more detailed asserts to detect whitespace...
tree
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commitdiff
2020-02-14
Jim Procter
JAL-3529 failing test for bug
tree
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commitdiff
2020-02-04
gmungoc
JAL-2422 pull up refactoring in preparation for Chimera...
tree
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commitdiff
2020-01-29
Ben Soares
JAL-3341 Increase number of lines looked at by test...
tree
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commitdiff
2020-01-28
gmungoc
JAL-3341 debug for failing unit test
bug/JAL-3341unitTestFails
tree
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commitdiff
2020-01-28
gmungoc
Merge branch 'feature/JAL-3121gffAttributeMap' into...
tree
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commitdiff
2020-01-28
gmungoc
JAL-2422 ChimeraX added to Preferences
tree
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commitdiff
2020-01-24
gmungoc
JAL=3121 more data format validation/tests, help text...
feature/JAL-3121gffAttributeMap
tree
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commitdiff
2020-01-23
gmungoc
JAL-3121 'attributes map' in GFF3 without special ...
tree
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commitdiff
2020-01-16
Jim Procter
Merge branch 'improvement/JAL-3449_add_install4j_instal...
tree
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commitdiff
2020-01-14
gmungoc
JAL-2422 proof of concept adaptations for ChimeraX...
tree
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commitdiff
2019-12-13
gmungoc
JAL-2422 basic proof of concept of ChimeraX opened...
tree
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commitdiff
2019-12-12
Jim Procter
JAL-2305 moved failing CrossRef tests to Functional_Fai...
tree
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commitdiff
2019-11-18
Ben Soares
JAL-3477 New sensible default decisions on memory,...
tree
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commitdiff
2019-11-01
gmungoc
JAL-3468 unit tests updated for changes
tree
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commitdiff
2019-10-10
Ben Soares
JAL-3210 Two fixed tests (previously not compiling)
tree
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commitdiff
2019-10-10
Ben Soares
JAL-3210 Two fixed tests (previously not compiling)
tree
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commitdiff
2019-10-08
gmungoc
Merge branch 'develop' into Jalview-JS/develop
tree
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commitdiff
2019-08-22
gmungoc
JAL-3121 slightly cleaner parsing of, and unit test...
tree
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commitdiff
2019-08-22
gmungoc
Merge branch 'develop' into feature/JAL-3121gffAttributeMap
tree
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commitdiff
2019-08-22
gmungoc
JAL-3187 case-insensitive codon variant calculation
tree
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commitdiff
2019-08-22
gmungoc
JAL-3121 round trip GFF attributes including map-valued...
tree
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commitdiff
2019-08-19
gmungoc
JAL-3412 calculateIdWidth - more consistency, constants...
tree
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commitdiff
2019-08-09
gmungoc
JAL-3187 removal of variant feature (non-virtual) trans...
tree
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commitdiff
2019-07-26
gmungoc
Merge branch 'features/JAL-3375vcfValidation' into
tree
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commitdiff
2019-07-26
gmungoc
JAL-1793 only decode specific special characters in...
tree
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commitdiff
2019-07-26
gmungoc
JAL-3376 capture VCF POS, ID, QUAL, FILTER as feature...
features/JAL-3375vcfValidation
tree
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commitdiff
2019-07-26
gmungoc
JAL-3375 format validate VCF Integer and Float fields
tree
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commitdiff
2019-07-25
gmungoc
JAL-3375 ignore '.' values for VCF data
tree
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commitdiff
2019-07-16
gmungoc
JAL-3210 Merge branch 'develop' into trialMerge
tree
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commitdiff
2019-07-10
gmungoc
Merge branch 'develop' into feature/JAL-3187linkedFeatures
tree
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commitdiff
2019-07-08
gmungoc
JAL-3187 derived peptide variants tweaks and tests
tree
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commitdiff
2019-07-05
gmungoc
JAL-1793 apply URL decoding when saving VCF attribute...
tree
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commitdiff
2019-06-26
Jim Procter
JAL-3332 test to check for duplicate db sources and...
tree
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commitdiff
2019-06-26
Jim Procter
JAL-3330 JAL-3332 relocate and simplify BeforeClass...
tree
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commitdiff
2019-06-26
Jim Procter
JAL-3330 test to verify sub/attributeName array is...
tree
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commitdiff
2019-06-18
Jim Procter
Merge branch 'bug/JAL-2830_editManglesDatasetSequence...
tree
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commitdiff
2019-06-18
gmungoc
JAL-3304 option to export linked features in Jalview...
tree
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commitdiff
2019-06-17
gmungoc
JAL-2792 JAL-3187 linked features (if shown) in Feature...
tree
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commitdiff
2019-06-17
gmungoc
JAL-3187 update alignAs code and unit tests for 'shared...
tree
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commitdiff
2019-06-17
gmungoc
JAL-3187 update unit test - protein variants not now...
tree
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commitdiff
2019-06-17
gmungoc
JAL-3187 add sequence to feature details table (and...
tree
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commitdiff
2019-06-14
gmungoc
JAL-3302 transfer visible 'linked' features to Chimera
tree
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commitdiff
2019-06-10
gmungoc
JAL-3296 ensure sequence cursor reset when sequence...
bug/JAL-3296changeStartInvalidateCursor
tree
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commitdiff
2019-06-07
gmungoc
Merge branch 'develop' into feature/JAL-3187linkedFeatures
tree
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commitdiff
2019-06-07
gmungoc
JAL-2738 use GeneLocus extends DBRefEntry to hold chrom...
tree
|
commitdiff
2019-06-06
gmungoc
JAL-3187 deletions (of Castor code) after merge from...
tree
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commitdiff
2019-06-06
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2019-05-27
gmungoc
JAL-3141 test file in test folder not examples
tree
|
commitdiff
2019-05-24
Ben Soares
JAL-3141 Fixed tests
tree
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commitdiff
2019-05-24
Ben Soares
JAL-3141 Reworked a lot of BackupFiles to allow the...
tree
|
commitdiff
2019-05-21
gmungoc
JAL-3273 small correction to expected result calculation
tree
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commitdiff
2019-05-02
gmungoc
JAL-3244 renamed Platform method for clarity
bug/JAL-3244jmolWindows
tree
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commitdiff
2019-05-01
gmungoc
JAL-3244 ignore file path separator when comparing...
tree
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commitdiff
2019-04-29
gmungoc
JAL-2738 JAL-2743 update unit test to match new VCF...
tree
|
commitdiff
2019-04-23
Jim Procter
Merge branch 'develop' into bug/JAL-3224_getdown_change...
tree
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commitdiff
2019-04-17
gmungoc
Merge branch 'develop' into Jalview-JS/develop
tree
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commitdiff
2019-04-16
Jim Procter
JAL-3130 tidy up system.output
jims/JAL-3130_Java11_Gradle_publishing
tree
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commitdiff
2019-04-16
Jim Procter
JAL-3130 call Jalview via the Test JVM’s JAVA_HOME...
tree
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commitdiff
2019-04-16
Jim Procter
JAL-3130 JAL-1889 reportCurrentWorkingDirectory test...
tree
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commitdiff
2019-04-16
Jim Procter
JAL-3130 JAL-1889 report absolute paths for CommandLine...
tree
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commitdiff
2019-04-16
Jim Procter
JAL-3130 JAL-1889 report absolute paths for CommandLine...
tree
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commitdiff
2019-04-16
Jim Procter
JAL-3130 JAL-1889 report absolute paths for CommandLine...
tree
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commitdiff
2019-04-16
Jim Procter
Reinstate imports from "JAL-1889 JAL-3130 patch broken...
tree
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commitdiff
2019-04-16
Jim Procter
JAL-1189 JAL-3130 patch broken tests
tree
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commitdiff
2019-04-12
Jim Procter
JAL-3130 specify module list when launching new Jalview...
tree
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commitdiff
2019-04-11
Jim Procter
Merge branch 'develop' into task/JAL-3130_Java_11_inves...
tree
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commitdiff
2019-04-04
gmungoc
JAL-3220 j2sIgnore on 3 more main methods
tree
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commitdiff
2019-04-04
gmungoc
JAL-3220 j2sIgnore on main methods on test / utility...
tree
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commitdiff
2019-04-04
gmungoc
JAL-3220 unneeded main methods removed
tree
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commitdiff
2019-04-02
gmungoc
JAL-3218 allow both Hide and Reveal in scale panel...
bug/JAL-3218scalePanelPopups
tree
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commitdiff
2019-03-29
gmungoc
Merge branch 'develop' into Jalview-JS/develop
tree
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commitdiff
2019-03-28
gmungoc
JAL-1889 patch for failing isControDown test on build...
tree
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commitdiff
2019-03-28
gmungoc
Merge branch 'develop' into Jalview-JS/develop
tree
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commitdiff
2019-03-28
gmungoc
Merge branch 'feature/JAL-3181linkOrdering' into develop
tree
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commitdiff
2019-03-25
gmungoc
Merge branch 'develop' into Jalview-JS/develop
tree
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commitdiff
2019-03-25
gmungoc
JAL-2717 adjusted code so default correctly returned...
tree
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commitdiff
2019-03-23
gmungoc
Merge branch 'develop' into Jalview-JS/develop
tree
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commitdiff
next