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[jalview.git] / test /
2017-10-13 kiramtJAL-2774 Created single event for update to both start... tree | commitdiff
2017-10-11 gmungocJAL-2609 tests updated for revised label width tree | commitdiff
2017-10-11 gmungocJAL-2772 check array bounds for sequence access bug/JAL-2772pdbArrayBounds tree | commitdiff
2017-10-11 gmungocJAL-2225 updates for review comments, Checkstyle tree | commitdiff
2017-10-11 gmungocMerge branch 'bug/JAL-2742' into develop tree | commitdiff
2017-10-11 gmungocJAL-2742 set HiddenColumns null for no hidden coluns... tree | commitdiff
2017-10-11 kiramtJAL-2742 test updates following review tree | commitdiff
2017-10-11 kiramtJAL-2742 minor test updates following review tree | commitdiff
2017-10-10 kiramtMerge remote-tracking branch 'origin/features/JAL-2609f... tree | commitdiff
2017-10-10 Jim ProcterMerge branch 'codereviews/JAL-1990_IProgressIndicator_j... tree | commitdiff
2017-10-09 gmungocJAL-2523 basic sleep and retry (3 times) on 429 respons... features/JAL-2523httpRetries tree | commitdiff
2017-10-09 gmungocJAL-2523 convenience method to get model organisms tree | commitdiff
2017-10-09 gmungocJAL-2738 assertion for derived protein variant added tree | commitdiff
2017-10-09 gmungocJAL-2738 remove commented code, unit test coverage tree | commitdiff
2017-10-06 Jim ProcterJAL-2758 flag and tests for omitting uniprot accession... features/JAL-2758_shorteruniprot tree | commitdiff
2017-10-06 kiramtJAL-2674 Last moves to iterators tree | commitdiff
2017-10-06 gmungocJAL-2738 unit test for mapping failure case tree | commitdiff
2017-10-05 gmungocJAL-2738 update spikes/mungo tree | commitdiff
2017-10-05 gmungocJAL-2738 helper method for convolving mappings tree | commitdiff
2017-10-05 gmungocJAL-2755 transfer chromosomal reference from transcript... tree | commitdiff
2017-10-05 gmungocJAL-2738 method to compound / traverse / convolve two... tree | commitdiff
2017-10-04 kiramtJAL-2674 more adjustments to locateVisibleBoundsOfSequence tree | commitdiff
2017-10-04 kiramtJAL-2674 Simplify locateVisibleBoundsOfSequence tree | commitdiff
2017-10-03 kiramtJAL-2647 unit test tree | commitdiff
2017-10-03 kiramtJAL-2674 testing tree | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo tree | commitdiff
2017-10-03 kjvdheideClarified test a little tree | commitdiff
2017-10-03 gmungocJAL-2738 update test for threaded VCFLoader tree | commitdiff
2017-10-03 kjvdheideAdded checks for X mouse coordinate being >= 0 and... tree | commitdiff
2017-10-02 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-10-02 kjvdhAdded check for negative start columns tree | commitdiff
2017-09-29 Jim ProcterJAL-2748 JAL-2745 remove uniprot from EBI fetch client... tree | commitdiff
2017-09-29 Jim ProcterJAL-2745 patch tests for https tree | commitdiff
2017-09-29 Jim ProcterJAL-2748 JAL-2745 remove uniprot from EBI fetch client... tree | commitdiff
2017-09-29 Jim ProcterJAL-2745 patch tests for https tree | commitdiff
2017-09-29 kiramtJAL-2674 Tidies tree | commitdiff
2017-09-29 kiramtJAL-2674 finish with iterators for now tree | commitdiff
2017-09-29 kiramtJAL=2674 Removed getHiddenColumnsCopy tree | commitdiff
2017-09-29 kiramtJAL-2674 reverted attempt at visible regions iterator tree | commitdiff
2017-09-28 kiramtJAL-2647 more iterators tree | commitdiff
2017-09-28 gmungocJAL-1796 GeneLociI as distinguished DBRefEntry tree | commitdiff
2017-09-28 gmungocJAL-2744 refactor PopupMenu constructor to enable addin... tree | commitdiff
2017-09-27 kiramtJAL-2674 Removing most calls to getHiddenColumnsCopy tree | commitdiff
2017-09-26 kiramtJAL-2742 uncomment test tree | commitdiff
2017-09-26 kiramtJAL-2674 uncomment test tree | commitdiff
2017-09-26 kiramtMerge remote-tracking branch 'origin/bug/JAL-2742'... tree | commitdiff
2017-09-26 kiramtJAL-2742 CigarArray constructor unit test tree | commitdiff
2017-09-26 kiramtJAL-2674 Unit test for new copy constructor. tree | commitdiff
2017-09-26 gmungocJAL-2738 JAL-2154 add DBRef from transcript to synthesi... tree | commitdiff
2017-09-26 kiramtMerge remote-tracking branch 'origin/bug/JAL-2740'... tree | commitdiff
2017-09-26 kiramtJAL-2740 additional unit testing bug/JAL-2740 tree | commitdiff
2017-09-26 kiramtMerge remote-tracking branch 'origin/bug/JAL-2740'... tree | commitdiff
2017-09-26 kiramtJAL-2740 removed unwanted code, added unit test tree | commitdiff
2017-09-26 kiramtJAL-2674 HiddenColumns interface tidies tree | commitdiff
2017-09-26 kiramtJAL-2647 Added iterators and associated tests and bench... tree | commitdiff
2017-09-26 gmungocJAL-2738 unit test for reverse strand gene tree | commitdiff
2017-09-25 gmungocJAL-2738 use complement base for a VCF variant on rever... tree | commitdiff
2017-09-25 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-09-25 gmungocJAL-2525 return no features if none matches ontology... tree | commitdiff
2017-09-25 gmungocJAL-2738 query unindexed file, unit test for VCFLoader tree | commitdiff
2017-09-22 gmungocJAL-2738 extract utility method to MappingUtils tree | commitdiff
2017-09-22 kiramtMerge remote-tracking branch 'origin/bug/JAL-2739'... tree | commitdiff
2017-09-22 kiramtJAL-2739 Fix ported to 2.10.3 tree | commitdiff
2017-09-22 kiramtJAL-2674 add bounds to findHiddenRegionPositions tree | commitdiff
2017-09-21 kiramtJAL-2674 unit test for gapBitSet tree | commitdiff
2017-09-21 gmungocJAL-2738 PoC of Load VCF file on to gene sequence tree | commitdiff
2017-09-21 kiramtJAL-2674 Reset tests tree | commitdiff
2017-09-20 kiramtJAL-2674 fix up interface of locateVisibleBoundsOfSequence tree | commitdiff
2017-09-20 kiramtJAL-2674 Transferred updated unit tests from first... tree | commitdiff
2017-09-19 gmungocJAL-1793 wrapper for plain or indexed VCF + simple... tree | commitdiff
2017-09-19 gmungocJAL-1793 simple tests of reading raw and indexed VCF... tree | commitdiff
2017-09-14 gmungocJAL-2541 unit test added tree | commitdiff
2017-09-14 gmungocJAL-2541 test with seq start > 1 (and fix Undo bug... tree | commitdiff
2017-09-14 gmungocJAL-2541 it works!! it works!!! tree | commitdiff
2017-09-14 gmungocJAL-2541 clean unit test of cut/undo (ungapped sequence) tree | commitdiff
2017-09-14 gmungocJAL-2541 more useful assert message tree | commitdiff
2017-09-14 gmungocJAL-2541 adjust end of contact feature spanning cut... tree | commitdiff
2017-09-14 gmungocJAL-2541 length check in deleteChars (redoing lost... tree | commitdiff
2017-09-14 gmungocJAL-2541 working Cut/Undo with feature relocation tree | commitdiff
2017-09-14 gmungocJAL-2541 revised cut with features (work in progress) tree | commitdiff
2017-09-14 gmungocJAL-2727 add SelectionGroup, Tree and PCA to test tree | commitdiff
2017-09-13 gmungocJAL-2727 alignment width and height tailored to this... tree | commitdiff
2017-09-12 gmungocJAL-2727 first pass of test of memory recovery on close all tree | commitdiff
2017-09-06 gmungocMerge remote-tracking branch 'origin/bug/JAL-2722'... portforward/JAL-2675_2102b1to2103 tree | commitdiff
2017-09-05 Jim ProcterMerge branch 'bug/JAL-2722' into releases/Release_2_10_... tree | commitdiff
2017-09-05 kiramtJAL-2722 unit test bug/JAL-2722 tree | commitdiff
2017-09-05 Jim ProcterMerge branch 'master' into portforward/JAL-2675_2102b1t... tree | commitdiff
2017-09-05 gmungocJAL-2225 unused collateForPdb removed tree | commitdiff
2017-09-05 gmungocJAL-2225 fix bug in collating unique pdb files and... tree | commitdiff
2017-09-04 Jim ProcterJAL-2527 move default colours for applet / application... tree | commitdiff
2017-09-04 Jim ProcterMerge branch 'bug/JAL-2704gapColourFading' into documen... tree | commitdiff
2017-09-04 gmungocJAL-2617 unit tests for CDS + stop codon, CDS with... bug/JAL-2617mappedStopCodon tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'bug/JAL-2691_nomultimermapping' into... tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'documentation/JAL-2675_release2102b1... tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'feature/JAL-2527' into documentation... tree | commitdiff
2017-09-01 gmungocJAL-2617 omit stop codon from synthesized CDS sequence tree | commitdiff
2017-09-01 kiramtJAL-2527 Additional test feature/JAL-2527 tree | commitdiff
2017-09-01 kiramtJAL-2527 Unit test for group colouring tree | commitdiff
2017-08-31 kiramtJAL-2527 Unit test tree | commitdiff
2017-08-31 gmungocJAL-2253 safer simpler resolution of identifiers using... tree | commitdiff
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