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jalview.git
2024-10-31
James Procter
Merge branch 'releases/Release_2_11_4_Branch'
master
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2024-10-29
James Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
releases/Release_2_11_4_Branch
Release_2_11_4_1
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2024-10-29
James Procter
JAL-4473 JAL-4467 release notes
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2024-10-29
James Procter
Merge branch 'bug/JAL-4467_getdownArchive_task_fails...
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2024-10-28
James Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-10-28
James Procter
JAL-4473 release date 29th Oct 2024
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2024-10-28
James Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-10-28
James Procter
JAL-4473 release notes for JAL-4380
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2024-10-28
Ben Soares
JAL-4380 Improved annotation tooltips especially second...
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2024-10-28
Ben Soares
JAL-4380 Added information to annotation tooltips when...
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2024-10-25
James Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-10-25
James Procter
Merge branch 'patch/fix_JAL-4470_JAL-4471_for_2_11_4_1...
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2024-10-04
Jim Procter
JAL-4473 whatsNew 2.11.4.1
patch/fix_JAL-4470_JAL-4471_for_2_11_4_1
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2024-10-04
Jim Procter
JAL-4473 new jalview patch release
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2024-10-04
Jim Procter
fix for JAL-4471 - secondary structure similarity tree...
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2024-10-04
Jim Procter
JAL-4470 fix: check for workers!=null before checking...
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2024-09-20
Ben Soares
JAL-4467 Take account of presource and xresource in...
bug/JAL-4467_getdownArchive_task_fails
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2024-09-18
Jim Procter
Merge branch 'releases/Release_2_11_4_Branch'
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2024-09-18
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
Release_2_11_4_0
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2024-09-18
Jim Procter
JAL-4418 release notes typos
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2024-09-18
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-18
Jim Procter
JAL-4418 bump release date to 18th September 2024
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2024-09-18
Jim Procter
JAL-4418 fix up help TOC copypaste error
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2024-09-17
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-17
Jim Procter
JAL-4418 more documentation tweaks - getting Jen Flemin...
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2024-09-17
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-17
Jim Procter
JAL-4418 JAL-4428 CHANNEL=RELEASE has a different path...
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2024-09-17
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-17
Jim Procter
JAL-4418 fix link case for linkcheck and window menu...
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2024-09-17
Jim Procter
JAL-4159 pasimap viewer image for docs
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2024-09-17
Jim Procter
JAL-4418 JAL-4090 known defect report for JAL-4349
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2024-09-17
Jim Procter
JAL-4414 JAL-1054 fix irrelevant failing network test...
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2024-09-17
Jim Procter
Merge branch 'bug/JAL-1054_broken_test' into develop
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2024-09-17
Jim Procter
JAL-4418 documentation for 4461
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2024-09-17
Jim Procter
JAL-4418 documentation for ss annotation row preference...
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2024-09-17
Jim Procter
JAL-4418 JAL-4442 quit racecondition patch
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2024-09-17
Jim Procter
Merge branch 'JAL-4442_cant_quit_jalview_on_windows_11...
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2024-09-17
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-17
Jim Procter
JAL-4418 release 2.11.4.0 today!
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2024-09-17
Jim Procter
JAL-4418 JAL-4392 show/hide group associated secondary...
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2024-09-17
Jim Procter
Merge branch 'improvement/JAL-4461_select_format_from_e...
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2024-09-16
Jim Procter
JAL-4392 JAL-4425 commented out code to allow consensus...
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2024-09-16
Jim Procter
Merge branch 'patch/JAL-4392_hide_ssconsensus_if_no_dat...
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2024-09-16
Jim Procter
Merge branch 'bug/JAL-4427_HTML_code_in_sequence_ID_tex...
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2024-09-16
Jim Procter
JAL-4392 autohide the secondary structure consensus...
patch/JAL-4392_hide_ssconsensus_if_no_data
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2024-09-16
Renia Correya
JAL-4427 Added test cases and a minor correction
bug/JAL-4427_HTML_code_in_sequence_ID_text
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2024-09-16
Jim Procter
JAL-4392 don't show SS consensus for DNA alignments
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2024-09-16
Ben Soares
JAL-4461 Move SwingUtils to darrylbu.util.SwingUtils...
improvement/JAL-4461_select_format_from_extension
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2024-09-13
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-13
Jim Procter
JAL-4418 release notes for JAL-4461 - nb need to docume...
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2024-09-13
Jim Procter
Merge branch 'improvement/JAL-4461_select_format_from_e...
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2024-09-13
Ben Soares
JAL-4461 Tests for JalviewFileChooser.defaultSaveFileFo...
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2024-09-13
Ben Soares
JAL-4461 Adding in a number of properties that control...
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2024-09-13
Jim Procter
JAL-4418 sign off JAL-4454 and convert markdown header...
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2024-09-13
Ben Soares
JAL-4461 Change JalviewFileFilter to use LinkedHashSet...
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2024-09-12
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-12
Jim Procter
Merge branch 'bug/JAL-4427_HTML_code_in_sequence_ID_tex...
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2024-09-12
Jim Procter
JAL-4418 sign off JAL-4427 JAL-4451 fix
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2024-09-12
Jim Procter
Merge branch 'bug/JAL-4427_HTML_code_in_sequence_ID_tex...
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2024-09-12
Ben Soares
JAL-4461 Added a dynamic tooltip to give more informati...
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2024-09-12
Jim Procter
JAL-4461 fix up formatting and remove old comment
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2024-09-12
Jim Procter
JAL-4461 after autodetection, update the filechooser...
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2024-09-12
Ben Soares
JAL-4461 Change labelling of All-known-alignment-files...
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2024-09-12
Ben Soares
JAL-4460 Don't display the All-known-alignment-files...
bug/JAL-4460_alignment_save_as_format_not_registering
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2024-09-12
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-12
Jim Procter
JAL-4454 make sure 2.11.4.0-test is stripped - *for...
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2024-09-11
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-11
Jim Procter
JAL-4418 release notes for JAL-4460
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2024-09-11
Jim Procter
Merge branch 'bug/JAL-4460_alignment_save_as_format_not...
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2024-09-11
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-11
Jim Procter
JAL-4454 make sure 2.11.4.0-test is stripped
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2024-09-11
Ben Soares
JAL-4460 In save as, set format from file extension...
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2024-09-11
Ben Soares
JAL-4460 Don't add .aln for an 'All known formats....
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2024-09-11
Ben Soares
JAL-4460 Update currentFileFormat /after/ new format...
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2024-09-11
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-11
Jim Procter
JAL-4418 JAL-4428,JAL-4421,JAL-3393 release notes
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2024-09-11
Jim Procter
Merge branch 'patch/JAL-4428_osx_codesigning_scripts...
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2024-09-11
Jim Procter
JAL-4428 codesign jnilibs
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2024-09-11
Jim Procter
JAL-4428 informational output (possibly needs verbosity...
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2024-09-11
Jim Procter
JAL-4428 giving another XXX
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2024-09-11
Jim Procter
JAL-4428 add some XXXX for mktemp -t
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2024-09-11
Ben Soares
JAL-4428 Fixes to -z's and mktemp
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2024-09-10
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-10
Jim Procter
Merge branch 'patch/JAL-4428_osx_codesigning_scripts...
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2024-09-10
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-10
Jim Procter
JAL-4454 allow channels to pick up most recent 'whatsNe...
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2024-09-09
Jim Procter
Merge branch 'develop' into releases/Release_2_11_4_Branch
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2024-09-09
Jim Procter
JAL-4418 initial pasimap documentation and updated...
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2024-09-09
Jim Procter
JAL-4418 postpone release to Thursday 12th Sept 2024
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2024-09-03
Jim Procter
JAL-4386 remove magic string in registerScoreModel...
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2024-09-02
Jim Procter
JAL-4418 fix linkCheck
documentation/JAL-4418_2_11_4_0_docs
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2024-09-02
Jim Procter
JAL-4418 release 10th September
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2024-09-02
Jim Procter
Merge branch 'documentation/JAL-4418_2_11_4_0_docs...
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2024-09-02
Jim Procter
Merge branch 'feature/JAL-4446_cancellable_pasimap_etal...
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2024-09-02
Jim Procter
JAL-4418 first pass at updating docs with pasimap,...
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2024-09-02
Ben Soares
JAL-1054 Add option to always follow redirects and...
bug/JAL-1054_broken_test
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2024-08-30
Renia Correya
Fix for JAL-4427
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2024-08-29
Jim Procter
JAL-4446 improved reporting of progress, and transition...
feature/JAL-4446_cancellable_pasimap_etal
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2024-08-29
Jim Procter
JAL-4446 refactor progress listener handler code for...
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2024-08-29
Jim Procter
Merge branch 'develop' into feature/JAL-4446_cancellabl...
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